SNP Profiles of "MXC 67"   View Data

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
1. _GC-03-014-2-02
______GGGGAT___GG______CTTTACCT___
2. _GC-03-014-2-02
______GGGGAT___GG______CTTTACCT___
3. _GC-03-014-2-02
______GGGGAT___GG______CTTTACCT___
4. _GC-03-014-2-02
______GGGGAT___GG______CTTTACCT___
5. _GC-03-014-2-02
______GGGGAT___GG______CTTTACCT___
6. _GC-03-014-2-02
______GGGGAT___GG______CTTTACCT___
7. _GC-03-014-2-02
______GGGGAT___GG______CTTTACCT___
8. _GC-03-014-2-02
______GGGGAT___GG______CTTTACCT___
9. _GC-05-131-3-33
______GGGGAT___GG______CTTTACCT___
10. _GC-05-131-3-33
______GGGGAT___GG______CTTTACCT___
11. _3202_1
______GG___AT___________________________
12. _3202_2
______GG___AT___________________________
13. _3202_5
______GG___AT___________________________
14. _3202_9
______GG___AT___________________________
15. _3202_16
______GG___AT___________________________
16. _3202_12_>_F
______GG___AT___________________________
17. _3202_4_>_FP
______GG___AT___________________________
18. _3202_6_>_FP
______GG___AT___________________________
19. _5333_4
______GG___AT___________________________
20. _5333_5_>_FP
______GG___AT___________________________
21. _RUQ_104
TTAC_________TT___CCGG____________GG
22. _RUQ_104
______GGCCAT___GG______AGAAACAG___
23. _RUQ_104
______GG___AT___________________________
24. _CAMPUS_12_X3_Y4
______CG___AT___________________________
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
1. _GC-03-014-2-02
___AAGTCCAT______CC___GGGGGGCC___
2. _GC-03-014-2-02
___AAGTCCATAA___CC___GGGGGGCC___
3. _GC-03-014-2-02
___AAGTCCATAA___CC___GGGGGGCC___
4. _GC-03-014-2-02
___AAGTCCATAA___CC___GGGGGGCC___
5. _GC-03-014-2-02
___AAGTCCATAA___CC___GGGGGGCC___
6. _GC-03-014-2-02
___AAGTCCATAA___CC___GGGGGGCC___
7. _GC-03-014-2-02
___AAGTCCATAA___CC___GGGGGGCC___
8. _GC-03-014-2-02
___AAGTCCATAA___CC___GGGGGGCC___
9. _GC-05-131-3-33
___AAGTCCATAA___CC___GGGGGGCC___
10. _GC-05-131-3-33
___AAGTCCATAA___CC___GGGGGGCC___
11. _3202_1
___AAGTCC_________CC___GGGG___CC___
12. _3202_2
___AAGTCC_________CC___GGGG___CC___
13. _3202_5
___AAGTCC_________CC___GGGG___CC___
14. _3202_9
___AAGTCC_________CC___GGGG___CC___
15. _3202_16
___AAGTCC_________CC___GGGG___CC___
16. _3202_12_>_F
___AAGTCC_________CC___GGGG___CC___
17. _3202_4_>_FP
___AAGTCC_________CC___GGGG___CC___
18. _3202_6_>_FP
___AAGTCC_________CC___GGGG___CC___
19. _5333_4
___AAGTCC_________CC___GGGG___CC___
20. _5333_5_>_FP
___AAGTCC_________CC___GGGG___CC___
21. _RUQ_104
ATAA____________AA___GG___GG______TT
22. _RUQ_104
___AAACGGATAA___CC___CCGGGGGG___
23. _RUQ_104
___AAGTCC_________CC___GGGG___CC___
24. _CAMPUS_12_X3_Y4
___AAGTCT_________AC______AG___CT___
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
1. _GC-03-014-2-02
___ATAA___AGATTTAG___GGATCGGG___
2. _GC-03-014-2-02
___ATAA___AGATTTAG___GGATCGGG___
3. _GC-03-014-2-02
___ATAA___AGATTTAG___GGATCGGG___
4. _GC-03-014-2-02
___ATAA___AGATTTAG___GGATCGGG___
5. _GC-03-014-2-02
___ATAA___AGATTTAG___GGATCGGG___
6. _GC-03-014-2-02
___ATAA___AGATTTAG___GGATCGGG___
7. _GC-03-014-2-02
___ATAA___AGATTTAG___GGATCGGG___
8. _GC-03-014-2-02
___ATAA___AGATTTAG___GGATCGGG___
9. _GC-05-131-3-33
___ATAA___AGATTTAG___GGATCGGG___
10. _GC-05-131-3-33
___ATAA___AGATTTAG___GGATCGGG___
11. _3202_1
_______________AT_________GG______GG___
12. _3202_2
_______________AT_________GG______GG___
13. _3202_5
_______________AT_________GG______GG___
14. _3202_9
_______________AT_________GG______GG___
15. _3202_16
_______________AT_________GG______GG___
16. _3202_12_>_F
_______________AT_________GG______GG___
17. _3202_4_>_FP
_______________AT_________GG______GG___
18. _3202_6_>_FP
_______________AT_________GG______GG___
19. _5333_4
_______________AT_________GG______GG___
20. _5333_5_>_FP
_______________AT_________GG______GG___
21. _RUQ_104
AA___AAAC____________CC_______________
22. _RUQ_104
___ATAA___AGATAAAG___GGATCG___AG
23. _RUQ_104
_______________AT_________GG______GG___
24. _CAMPUS_12_X3_Y4
_______________AA_________AG______GG___
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
1. _GC-03-014-2-02
___CC___CCCT___GGGGAACC___AACCGG
2. _GC-03-014-2-02
___CC___CCCT___GGGGAACC___AACCGG
3. _GC-03-014-2-02
___CC___CCCT___GGGGAACC___AACCGG
4. _GC-03-014-2-02
___CC___CCCT___GGGGAACC___AACCGG
5. _GC-03-014-2-02
___CC___CCCT___GGGGAACC___AACCGG
6. _GC-03-014-2-02
___CC___CCCT___GGGGAACC___AACCGG
7. _GC-03-014-2-02
___CC___CCCT___GGGGAACC___AACCGG
8. _GC-03-014-2-02
___CC___CCCT___GGGGAACC___AACCGG
9. _GC-05-131-3-33
___CC___CCCT___GGGGAACC___AACCGG
10. _GC-05-131-3-33
___CC___CCCT___GGGGAACC___AACC___
11. _3202_1
_________CCCT______GG___CC___AA______
12. _3202_2
_________CCCT______GG___CC___AA______
13. _3202_5
_________CCCT______GG___CC___AA______
14. _3202_9
_________CCCT______GG___CC___AA______
15. _3202_16
_________CCCT______GG___CC___AA______
16. _3202_12_>_F
_________CCCT______GG___CC___AA______
17. _3202_4_>_FP
_________CCCT______GG___CC___AA______
18. _3202_6_>_FP
_________CCCT______GG___CC___AA______
19. _5333_4
_________CCCT______GG___CC___AA______
20. _5333_5_>_FP
_________CCCT______GG___CC___AA______
21. _RUQ_104
AA___CTCC___AA_________CCTTAACC___
22. _RUQ_104
___CC___CC______GGCCAACC___AAGG___
23. _RUQ_104
_________CCCT______GG___CC___AA______
24. _CAMPUS_12_X3_Y4
_________ACCT______GT___CC___CC______
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
1. _GC-03-014-2-02
TT____________AG___GGCCCTTTAAGTGG
2. _GC-03-014-2-02
TT____________AG___GGCCCTTTAAGTGG
3. _GC-03-014-2-02
TT____________AG___GGCCCTTTAAGTGG
4. _GC-03-014-2-02
TT____________AG___GGCCCTTTAAGTGG
5. _GC-03-014-2-02
TT____________AG___GGCCCTTTAAGTGG
6. _GC-03-014-2-02
TT____________AG___GGCCCTTTAAGTGG
7. _GC-03-014-2-02
TT____________AG___GGCCCTTTAAGTGG
8. _GC-03-014-2-02
TT____________AG___GGCCCTTTAAGTGG
9. _GC-05-131-3-33
TT____________AG___GGCCCTTTAAGTGG
10. _GC-05-131-3-33
TT____________AG___GGCCCTTTAAGTGG
11. _3202_1
TT___________________________TT_________
12. _3202_2
TT___________________________TT_________
13. _3202_5
TT___________________________TT_________
14. _3202_9
TT___________________________TT_________
15. _3202_16
TT___________________________TT_________
16. _3202_12_>_F
TT___________________________TT_________
17. _3202_4_>_FP
TT___________________________TT_________
18. _3202_6_>_FP
TT___________________________TT_________
19. _5333_4
TT___________________________TT_________
20. _5333_5_>_FP
TT___________________________TT_________
21. _RUQ_104
___TTAACCAG___CG______CCTTAA______
22. _RUQ_104
AA____________AA___AG______AAAAACCC
23. _RUQ_104
CT_________AG_______________TT_________
24. _CAMPUS_12_X3_Y4
TT_________AG_______________GG_________
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
1. _GC-03-014-2-02
TT___AC___GGAACGCCCCCCAATTGGTT
2. _GC-03-014-2-02
TT___AC___GGAACGCCCCCCAATTGGTT
3. _GC-03-014-2-02
TT___AC___GGAACGCCCCCCAATTGGTT
4. _GC-03-014-2-02
TT___AC___GGAACGCCCCCCAATTGGTT
5. _GC-03-014-2-02
TT___AC___GGAACGCCCCCCAATTGGTT
6. _GC-03-014-2-02
TT___AC___GGAACGCCCCCCAATTGGTT
7. _GC-03-014-2-02
TT___AC___GGAACGCCCCCCAATTGGTT
8. _GC-03-014-2-02
TT___AC___GGAACGCCCCCCAATTGGTT
9. _GC-05-131-3-33
TT___AC___GGAACGCCCCCCAA___GGTT
10. _GC-05-131-3-33
TT___AC___GGAACGCCCCCCAATTGGTT
11. _3202_1
__________________CG___CC______TTGG___
12. _3202_2
__________________CG___CC______TTGG___
13. _3202_5
__________________CG___CC______TTGG___
14. _3202_9
__________________CG___CC______TTGG___
15. _3202_16
__________________CG___CC______TTGG___
16. _3202_12_>_F
__________________CG___CC______TTGG___
17. _3202_4_>_FP
__________________CG___CC______TTGG___
18. _3202_6_>_FP
__________________CG___CC______TTGG___
19. _5333_4
__________________CG___CC_________GG___
20. _5333_5_>_FP
__________________CG___CC______TTGG___
21. _RUQ_104
___TTACAATT___CG_________AA_________
22. _RUQ_104
AA___AC___CCAACG___GGGGAAAAGGAA
23. _RUQ_104
__________________CG___CC______TTGG___
24. _CAMPUS_12_X3_Y4
__________________CG___CT______CTCG___
 85 86 87 88 89 90 91 92 93 94 95 96 97 98
1. _GC-03-014-2-02
___AATTAGCC______CTCC___CTAA___AA
2. _GC-03-014-2-02
___AATTAGCC______CTCC___CTAATTAA
3. _GC-03-014-2-02
___AATTAGCC______CTCC___CTAATTAA
4. _GC-03-014-2-02
___AATTAGCC______CTCC___CTAATTAA
5. _GC-03-014-2-02
___AATTAGCC______CTCC___CTAATTAA
6. _GC-03-014-2-02
___AATTAGCC______CTCC___CTAATTAA
7. _GC-03-014-2-02
___AATTAGCC______CTCC___CTAATTAA
8. _GC-03-014-2-02
___AATTAGCC______CTCC___CTAATTAA
9. _GC-05-131-3-33
___AATTAGCC______CTCC___CTAATTAA
10. _GC-05-131-3-33
___AATTAGCC______CTCC___CTAATTAA
11. _3202_1
___AATTAG__________________CTAA___AA
12. _3202_2
___AATTAG__________________CTAA___AA
13. _3202_5
___AATTAG__________________CTAA___AA
14. _3202_9
___AATTAG__________________CTAA___AA
15. _3202_16
___AATTAG__________________CTAA___AA
16. _3202_12_>_F
___AATTAG__________________CTAA___AA
17. _3202_4_>_FP
___AATTAG__________________CTAA___AA
18. _3202_6_>_FP
___AATTAG__________________CTAA___AA
19. _5333_4
___AATTAG__________________CTAA___AA
20. _5333_5_>_FP
___AATTAG__________________CTAA___AA
21. _RUQ_104
CG______AGCCTTAT______CC___AA______
22. _RUQ_104
___AAAAAG_________AG______AGAAAAAA
23. _RUQ_104
___AATTAG__________________CTAA___AA
24. _CAMPUS_12_X3_Y4
___ATCTAA__________________CTAG___AT
 99 100 101 102 103 104 105 106 107 108 109 110 111 112
1. _GC-03-014-2-02
CCAG___AACTTTTTTTGT______CCGGCC
2. _GC-03-014-2-02
CCAG___AACTTTTTTTGT______CCGGCC
3. _GC-03-014-2-02
CCAG___AACTTTTTTTGT______CCGGCC
4. _GC-03-014-2-02
CCAG___AACTTTTTTTGT______CCGGCC
5. _GC-03-014-2-02
CCAG___AACTTTTTTTGT______CCGGCC
6. _GC-03-014-2-02
CCAG___AACTTTTTTTGT______CCGGCC
7. _GC-03-014-2-02
CCAG___AACTTTTTTTGT______CCGGCC
8. _GC-03-014-2-02
CCAG___AACTTTTTTTGT______CCGGCC
9. _GC-05-131-3-33
CCAG___AACTTTTTTTGT______CCGGCC
10. _GC-05-131-3-33
CCAG___AACTTTTTTTGT______CCGGCC
11. _3202_1
____________CT______TT____________GGCC
12. _3202_2
____________CT______TT____________GGCC
13. _3202_5
____________CT______TT____________GGCC
14. _3202_9
____________CT______TT____________GGCC
15. _3202_16
____________CT______TT____________GGCC
16. _3202_12_>_F
____________CT______TT____________GGCC
17. _3202_4_>_FP
____________CT______TT____________GGCC
18. _3202_6_>_FP
____________CT______TT____________GGCC
19. _5333_4
____________CT______TT____________GGCC
20. _5333_5_>_FP
____________CT______TT____________GGCC
21. _RUQ_104
______TT___CT____________GTAA___GG___
22. _RUQ_104
GGAG_________AAAA___AC____________GG
23. _RUQ_104
____________CT______CT____________GGCC
24. _CAMPUS_12_X3_Y4
____________CT______TT____________GTCT
 113 114 115 116 117 118 119 120 121 122 123 124 125 126
1. _GC-03-014-2-02
______TTAAGG______TTCCCCCGAGCC___
2. _GC-03-014-2-02
______TTAAGG______TTCCCCCGAGCC___
3. _GC-03-014-2-02
______TTAAGG______TTCCCCCGAGCC___
4. _GC-03-014-2-02
______TTAAGG______TTCCCCCGAGCC___
5. _GC-03-014-2-02
______TTAAGG______TTCCCCCGAGCC___
6. _GC-03-014-2-02
______TTAAGG______TTCCCCCGAGCC___
7. _GC-03-014-2-02
______TTAAGG______TTCCCCCGAGCC___
8. _GC-03-014-2-02
______TTAAGG______TTCCCCCGAGCC___
9. _GC-05-131-3-33
______TTAAGG______TTCCCCCGAGCC___
10. _GC-05-131-3-33
______TTAAGG______TTCCCCCGAGCC___
11. _3202_1
_________AA_________TT___CCCGAGCC___
12. _3202_2
_________AA_________TT___CCCGAGCC___
13. _3202_5
_________AA_________TT___CCCGAGCC___
14. _3202_9
_________AA_________TT___CCCGAGCC___
15. _3202_16
_________AA_________TT___CCCGAGCC___
16. _3202_12_>_F
_________AA_________TT___CCCGAGCC___
17. _3202_4_>_FP
_________AA_________TT___CCCGAGCC___
18. _3202_6_>_FP
_________AA_________TT___CCCGAGCC___
19. _5333_4
_________AA_________TT___CCCGAGCC___
20. _5333_5_>_FP
_________AA_________TT___CCCGAGCC___
21. _RUQ_104
GGTT_________GGGG_________CG______CC
22. _RUQ_104
______AAAAGG______AAGGGGCCAGGG___
23. _RUQ_104
_________AA_________TT___CCCGAGCC___
24. _CAMPUS_12_X3_Y4
_________AC_________CT___CTCGAACT___
 127 128 129 130 131 132         
1. _GC-03-014-2-02
___ACGGAAAGAAX_XX_XX_XX_XX_XX_XX_XX_X
2. _GC-03-014-2-02
___ACGGAAAGAAX_XX_XX_XX_XX_XX_XX_XX_X
3. _GC-03-014-2-02
___ACGGAAAGAAX_XX_XX_XX_XX_XX_XX_XX_X
4. _GC-03-014-2-02
___ACGGAAAGAAX_XX_XX_XX_XX_XX_XX_XX_X
5. _GC-03-014-2-02
___ACGGAAAGAAX_XX_XX_XX_XX_XX_XX_XX_X
6. _GC-03-014-2-02
___ACGGAAAGAAX_XX_XX_XX_XX_XX_XX_XX_X
7. _GC-03-014-2-02
___ACGGAAAGAAX_XX_XX_XX_XX_XX_XX_XX_X
8. _GC-03-014-2-02
___ACGGAAAGAAX_XX_XX_XX_XX_XX_XX_XX_X
9. _GC-05-131-3-33
___ACGGAAAGAAX_XX_XX_XX_XX_XX_XX_XX_X
10. _GC-05-131-3-33
___ACGGAAAGAAX_XX_XX_XX_XX_XX_XX_XX_X
11. _3202_1
__________________X_XX_XX_XX_XX_XX_XX_XX_X
12. _3202_2
__________________X_XX_XX_XX_XX_XX_XX_XX_X
13. _3202_5
__________________X_XX_XX_XX_XX_XX_XX_XX_X
14. _3202_9
__________________X_XX_XX_XX_XX_XX_XX_XX_X
15. _3202_16
__________________X_XX_XX_XX_XX_XX_XX_XX_X
16. _3202_12_>_F
__________________X_XX_XX_XX_XX_XX_XX_XX_X
17. _3202_4_>_FP
__________________X_XX_XX_XX_XX_XX_XX_XX_X
18. _3202_6_>_FP
__________________X_XX_XX_XX_XX_XX_XX_XX_X
19. _5333_4
__________________X_XX_XX_XX_XX_XX_XX_XX_X
20. _5333_5_>_FP
__________________X_XX_XX_XX_XX_XX_XX_XX_X
21. _RUQ_104
AT_______________X_XX_XX_XX_XX_XX_XX_XX_X
22. _RUQ_104
___AC___AAAGAAX_XX_XX_XX_XX_XX_XX_XX_X
23. _RUQ_104
__________________X_XX_XX_XX_XX_XX_XX_XX_X
24. _CAMPUS_12_X3_Y4
__________________X_XX_XX_XX_XX_XX_XX_XX_X

 Key

Mars Center for Cocoa Science Brazil

1._MXC_67 GC-03-014-2-02
Location: Tree: 1
Notes: 1
 Mars, 2018
2._MXC_67 GC-03-014-2-02
Location: Tree: 2
Notes: 2
 Mars, 2018
3._MXC_67 GC-03-014-2-02
Location: Tree: 4
Notes: 4 > FP1
 Mars, 2018
4._MXC_67 GC-03-014-2-02
Location: Tree: 5
Notes: 5
 Mars, 2018
5._MXC_67 GC-03-014-2-02
Location: Tree: 6
Notes: 6 > FP2
 Mars, 2018
6._MXC_67 GC-03-014-2-02
Location: Tree: 9
Notes: 9
 Mars, 2018
7._MXC_67 GC-03-014-2-02
Location: Tree: 12
Notes: 12 > FP4
 Mars, 2018
8._MXC_67 GC-03-014-2-02
Location: Tree: 16
Notes: 16
 Mars, 2018
9._MXC_67 GC-05-131-3-33
Location: Tree: 4
Notes: 4
 Mars, 2018
10._MXC_67 GC-05-131-3-33
Location: Tree: 5
Notes: 5 > FP3
 Mars, 2018
11._MXC_67
Location: 3202 1
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016
12._MXC_67
Location: 3202 2
 Dapeng Zhang, 2016
13._MXC_67
Location: 3202 5
 Dapeng Zhang, 2016
14._MXC_67
Location: 3202 9
 Dapeng Zhang, 2016
15._MXC_67
Location: 3202 16
 Dapeng Zhang, 2016
16._MXC_67
Location: 3202 12 > F
 Dapeng Zhang, 2016
17._MXC_67
Location: 3202 4 > FP
 Dapeng Zhang, 2016
18._MXC_67
Location: 3202 6 > FP
 Dapeng Zhang, 2016
19._MXC_67
Location: 5333 4
 Dapeng Zhang, 2016
20._MXC_67
Location: 5333 5 > FP
 Dapeng Zhang, 2016

International Cocoa Quarantine Centre, Reading (ICQC,R) United Kingdom

21._MXC_67 RUQ 104
 Lambert Motilal, 2023
22._MXC_67 RUQ 104
Notes: Reading_Collection
 Mars, 2018
23._MXC_67 RUQ 104
 Dapeng Zhang, 2016

International Cocoa Genebank, Trinidad (ICG,T) Trinidad and Tobago

24._MXC_67
Location: CAMPUS 12 X3 Y4
 Dapeng Zhang, 2016

  Key to SNP Markers

1TcSNP13 2TcSNP19 3TcSNP25 4TcSNP28 5TcSNP32
6TcSNP33 7TcSNP42 8TcSNP49 9TcSNP52 10TcSNP60
11TcSNP75 12TcSNP90 13TcSNP122 14TcSNP131 15TcSNP143
16TcSNP144 17TcSNP150 18TcSNP151 19TcSNP154 20TcSNP174
21TcSNP189 22TcSNP193 23TcSNP194 24TcSNP226 25TcSNP230
26TcSNP240 27TcSNP242 28TcSNP290 29TcSNP305 30TcSNP316
31TcSNP329 32TcSNP363 33TcSNP364 34TcSNP372 35TcSNP413
36TcSNP418 37TcSNP421 38TcSNP429 39TcSNP430 40TcSNP448
41TcSNP469 42TcSNP497 43TcSNP519 44TcSNP521 45TcSNP522
46TcSNP529 47TcSNP534 48TcSNP546 49TcSNP547 50TcSNP560
51TcSNP561 52TcSNP577 53TcSNP589 54TcSNP591 55TcSNP602
56TcSNP606 57TcSNP619 58TcSNP640 59TcSNP642 60TcSNP644
61TcSNP645 62TcSNP653 63TcSNP660 64TcSNP689 65TcSNP701
66TcSNP702 67TcSNP723 68TcSNP731 69TcSNP751 70TcSNP776
71TcSNP799 72TcSNP800 73TcSNP823 74TcSNP835 75TcSNP836
76TcSNP860 77TcSNP872 78TcSNP878 79TcSNP891 80TcSNP894
81TcSNP899 82TcSNP917 83TcSNP929 84TcSNP944 85TcSNP945
86TcSNP953 87TcSNP994 88TcSNP998 89TcSNP999 90TcSNP1010
91TcSNP1019 92TcSNP1034 93TcSNP1041 94TcSNP1053 95TcSNP1060
96TcSNP1062 97TcSNP1063 98TcSNP1075 99TcSNP1096 100TcSNP1111
101TcSNP1112 102TcSNP1126 103TcSNP1144 104TcSNP1149 105TcSNP1156
106TcSNP1165 107TcSNP1175 108TcSNP1205 109TcSNP1230 110TcSNP1242
111TcSNP1253 112TcSNP1270 113TcSNP1275 114TcSNP1293 115TcSNP1309
116TcSNP1350 117TcSNP1383 118TcSNP1401 119TcSNP1404 120TcSNP1414
121TcSNP1439 122TcSNP1442 123TcSNP1458 124TcSNP1484 125TcSNP1520
126TcSNP1524 127TcSNP1527 128Tcm001s00947643 129Tcm002s20575712 130Tcm003s01336581
131Tcm003s07402719 132Tcm006s26664133