SNP Profiles of "BE 10"   View Data

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
1. _GC-08-090-2-13
GGGGTTGGCCTTCCTTCCTTCCAAGGAA
2. _GC-08-090-2-13
GGGGTTGGCCTTCCTTCCTTCCAAGGAA
3. _GC-08-090-2-13
GGGGTTGGCCTTCCTTCCTT___AAGGAA
4. _GC-08-090-2-13
GGGGTTGGCCTTCCTTCCTTCCAAGGAA
5. _GC-08-090-2-13
GGGGTTGGCCTTCCTTCCTTCCAAGGAA
6. _GC-08-090-2-13
GGGGTTGGCCTTCCTTCCTTCCAAGGAA
7. _GC-08-090-2-13
GGGGTTGGCCTTCCTTCCTTCCAAGGAA
8. _GC-08-090-2-13
GGGGTTGGCCTTCCTTCCTTCCAAGGAA
9. _GC-08-090-2-13
GGGGTTGGCCTTCCTTCCTTCCAAGGAA
10. _GC-08-090-2-13
GGGGTTGGCCTTCCTTCCTTCCAAGGAA
11. _GC-08-090-2-13
GGGGTTGGCCTTCCTTCCTTCCAAGGAA
12. _GC-08-090-2-13
GGGGTTGGCCTTCCTTCCTTCCAAGGAA
13. _GC-08-90-2-13
GGCCTTGGGGAACCAACCAAGGTTGGAA
14. _8213_5
GG___TT_______________CCTTCC______AA
15. _8213_6
GG___TT_______________CCTTCC______AA
16. _8213_7
GG___TT_______________CCTTCC______AA
17. _8213_8
GG___TT_______________CCTTCC______AA
18. _8213_9
GG___TT_______________CCTTCC______AA
19. _8213_11
GG___TT_______________CCTTCC______AA
20. _8213_13
GG___TT_______________CCTTCC______AA
21. _8213_14
GG___TT_______________CCTTCC______AA
22. _8213_1_>_FP
GG___TT_______________CCTTCC______AA
23. _8213_2_>_FP
GG___TT_______________CCTTCC______AA
24. _8213_3_>_FP
GG___TT_______________CCTT_________AA
25. _8213_4_>_FP
GG___TT_______________CCTTCC______AA
26. _5A_N3/467_T1
GG___TT_______________CCTTCC______AA
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
1. _GC-08-090-2-13
CCAAGGCCAAGGGGAATTGGGGTTCCAA
2. _GC-08-090-2-13
CCAAGGCCAAGGGGAATTGGGGTTCCAA
3. _GC-08-090-2-13
CCAAGGCCAAGGGGAATTGGGGTTCCAA
4. _GC-08-090-2-13
CCAAGGCCAAGGGGAATTGGGGTTCCAA
5. _GC-08-090-2-13
CCAAGGCCAAGGGGAATTGGGGTTCCAA
6. _GC-08-090-2-13
CCAAGGCCAAGGGGAATTGGGGTTCCAA
7. _GC-08-090-2-13
CCAAGGCCAAGGGGAATTGGGGTTCCAA
8. _GC-08-090-2-13
CCAAGGCCAAGGGGAATTGGGGTTCCAA
9. _GC-08-090-2-13
CCAAGGCCAAGGGGAATTGGGGTTCCAA
10. _GC-08-090-2-13
CCAAGGCCAAGGGGAATTGGGGTTCCAA
11. _GC-08-090-2-13
CCAAGGCCAAGGGGAATTGGGGTTCCAA
12. _GC-08-090-2-13
CCAAGGCCAAGGGGAATTGGGGTTCCAA
13. _GC-08-90-2-13
GGAAGGGGTTGGGGAAAAGGGGTTGG___
14. _8213_5
CCAA___CC_________AA______GG______AA
15. _8213_6
CCAA___CC_________AA______GG______AA
16. _8213_7
CCAA___CC_________AA______GG______AA
17. _8213_8
CCAA___CC_________AA______GG______AA
18. _8213_9
CCAA___CC_________AA______GG______AA
19. _8213_11
CCAA___CC_________AA______GG______AA
20. _8213_13
CCAA___CC_________AA______GG______AA
21. _8213_14
CCAA___CC_________AA______GG______AA
22. _8213_1_>_FP
CCAA___CC_________AA______GG______AA
23. _8213_2_>_FP
CCAA___CC_________AA______GG______AA
24. _8213_3_>_FP
CCAA___CC_________AA______GG______AA
25. _8213_4_>_FP
CCAA___CC_________AA______GG______AA
26. _5A_N3/467_T1
CCAA_______________AA______GG______AA
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
1. _GC-08-090-2-13
___CCCCTTGGTTAACCAATTAATTGGAA
2. _GC-08-090-2-13
___CCCCTTGGTTAACCAATTAATTGGAA
3. _GC-08-090-2-13
___CCCCTTGGTTAACCAATT___TTGGAA
4. _GC-08-090-2-13
___CCCCTTGGTTAACCAATTAATTGGAA
5. _GC-08-090-2-13
___CCCCTTGGTTAACCAATTAATTGGAA
6. _GC-08-090-2-13
___CCCCTTGGTTAACCAATTAATTGGAA
7. _GC-08-090-2-13
___CCCCTTGGTTAACCAATTAATTGGAA
8. _GC-08-090-2-13
___CCCCTTGGTTAACCAATTAATTGGAA
9. _GC-08-090-2-13
___CCCCTTGGTTAACCAATTAATTGGAA
10. _GC-08-090-2-13
___CCCCTTGGTTAACCAATTAATTGGAA
11. _GC-08-090-2-13
___CCCCTTGGTTAACCAATTAATTGGAA
12. _GC-08-090-2-13
___CCCCTTGGTTAACCAATTAATTGGAA
13. _GC-08-90-2-13
AACCCC___GGAAAACCAAAA___AA___GG
14. _8213_5
______CCTT___TT___CCAA______TTGG___
15. _8213_6
______CCTT___TT___CCAA______TTGG___
16. _8213_7
______CCTT___TT___CCAA______TTGG___
17. _8213_8
______CCTT___TT___CCAA______TTGG___
18. _8213_9
______CCTT___TT___CCAA______TTGG___
19. _8213_11
______CCTT___TT___CCAA______TTGG___
20. _8213_13
______CCTT___TT___CCAA______TTGG___
21. _8213_14
______CCTT___TT___CCAA______TTGG___
22. _8213_1_>_FP
______CCTT___TT___CCAA______TTGG___
23. _8213_2_>_FP
______CCTT___TT___CCAA______TTGG___
24. _8213_3_>_FP
______CCTT___TT___CCAA______TTGG___
25. _8213_4_>_FP
______CCTT___TT___CCAA______TTGG___
26. _5A_N3/467_T1
_________TT___TT___CCAA______TTAA___
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
1. _GC-08-090-2-13
AATTCCGGGGTTTTTTAAGG___GGCCCC
2. _GC-08-090-2-13
AATTCCGGGGTTTTTTAAGG___GGCCCC
3. _GC-08-090-2-13
AATTCCGGGGTTTTTTAAGG___GGCCCC
4. _GC-08-090-2-13
AATTCCGGGGTTTTTTAAGG___GGCCCC
5. _GC-08-090-2-13
AATTCCGGGGTTTTTTAAGG___GGCCCC
6. _GC-08-090-2-13
AATTCCGGGGTTTTTTAAGG___GGCCCC
7. _GC-08-090-2-13
AATTCCGGGGTTTTTTAAGG___GGCCCC
8. _GC-08-090-2-13
AATTCCGGGGTTTTTTAAGG___GGCCCC
9. _GC-08-090-2-13
AATTCCGGGGTTTTTTAAGG___GGCCCC
10. _GC-08-090-2-13
___TTCCGGGGTTTTTTAAGG___GGCCCC
11. _GC-08-090-2-13
AATTCCGGGGTTTTTTAAGG___GGCCCC
12. _GC-08-090-2-13
AATTCCGGGGTTTTTTAAGG___GGCCCC
13. _GC-08-90-2-13
AA______CCGGAAAAAAAACCGGCC___GG
14. _8213_5
_________GG_____________________GG___CC
15. _8213_6
_________GG_____________________GG___CC
16. _8213_7
_________GG_____________________GG___CC
17. _8213_8
_________GG_____________________GG___CC
18. _8213_9
_________GG_____________________GG___CC
19. _8213_11
_________GG_____________________GG___CC
20. _8213_13
_________GG_____________________GG___CC
21. _8213_14
_________GG_____________________GG___CC
22. _8213_1_>_FP
_________GG_____________________GG___CC
23. _8213_2_>_FP
_________GG_____________________GG___CC
24. _8213_3_>_FP
_________GG_____________________GG___CC
25. _8213_4_>_FP
_________GG_____________________GG___CC
26. _5A_N3/467_T1
_________GG_____________________GG___CC
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
1. _GC-08-090-2-13
CCAATTGGCCAATTGGTTTTCCCCAAGG
2. _GC-08-090-2-13
CCAATTGGCCAATTGGTTTTCCCCAAGG
3. _GC-08-090-2-13
CCAA___GGCCAATTGGTTTTCCCCAAGG
4. _GC-08-090-2-13
CCAATTGGCCAATTGGTTTTCCCCAAGG
5. _GC-08-090-2-13
CCAATTGGCCAATTGGTTTTCCCCAAGG
6. _GC-08-090-2-13
CCAATTGGCCAATTGGTTTTCCCCAAGG
7. _GC-08-090-2-13
CCAATTGGCCAATTGGTTTTCCCCAAGG
8. _GC-08-090-2-13
CCAATTGGCCAATTGGTTTTCCCCAAGG
9. _GC-08-090-2-13
CCAATTGGCCAATTGGTTTTCCCCAAGG
10. _GC-08-090-2-13
CCAATTGGCCAATTGGTTTTCCCCAAGG
11. _GC-08-090-2-13
CCAATTGGCCAATTGGTTTTCCCCAAGG
12. _GC-08-090-2-13
CCAATTGGCCAATTGGTTTTCCCCAAGG
13. _GC-08-90-2-13
GGAAAAGGGGAAAAGG___AA___GGAACC
14. _8213_5
______TTGG___AATTGG_________CCAA___
15. _8213_6
______TTGG___AATTGG_________CCAA___
16. _8213_7
______TTGG___AATTGG_________CCAA___
17. _8213_8
______TTGG___AATTGG_________CCAA___
18. _8213_9
______TTGG___AATTGG_________CCAA___
19. _8213_11
______TTGG___AATTGG_________CCAA___
20. _8213_13
______TTGG___AATTGG_________CCAA___
21. _8213_14
______TTGG___AATTGG_________CCAA___
22. _8213_1_>_FP
______TTGG___AATTGG_________CCAA___
23. _8213_2_>_FP
______TTGG___AATTGG_________CCAA___
24. _8213_3_>_FP
_________GG___AATTGG_________CCAA___
25. _8213_4_>_FP
______TTGG___AATTGG_________CCAA___
26. _5A_N3/467_T1
_______________AATTGG_________CCAA___
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
1. _GC-08-090-2-13
AACCGGTTTTTTTTCCGGCCTTCCTTAA
2. _GC-08-090-2-13
AACCGGTTTTTTTTCCGGCC___CCTTAA
3. _GC-08-090-2-13
AACCGGTTTTTTTTCCGGCCTTCCTTAA
4. _GC-08-090-2-13
AACCGGTTTTTTTTCCGGCCTTCCTTAA
5. _GC-08-090-2-13
AACCGGTTTTTTTTCCGGCCTTCCTTAA
6. _GC-08-090-2-13
AACCGGTTTTTTTTCCGGCCTTCCTTAA
7. _GC-08-090-2-13
AACCGGTTTTTTTTCCGGCCTTCCTTAA
8. _GC-08-090-2-13
AACCGGTTTTTTTTCCGGCCTTCCTTAA
9. _GC-08-090-2-13
AACCGGTTTTTTTTCCGGCCTTCCTTAA
10. _GC-08-090-2-13
AACCGGTTTTTTTTCCGGCCTTCCTTAA
11. _GC-08-090-2-13
AACCGGTTTTTTTTCCGGCCTTCCTTAA
12. _GC-08-090-2-13
AACCGGTTTTTTTTCCGGCCTTCCTTAA
13. _GC-08-90-2-13
AAGGGG______AAAA___CC___AAGGAAAA
14. _8213_5
AA_________TT______CC______TTCC___AA
15. _8213_6
AA_________TT______CC______TTCC___AA
16. _8213_7
AA_________TT______CC______TTCC___AA
17. _8213_8
AA_________TT______CC______TTCC___AA
18. _8213_9
AA_________TT______CC______TTCC___AA
19. _8213_11
AA_________TT______CC______TTCC___AA
20. _8213_13
AA_________TT______CC______TTCC___AA
21. _8213_14
AA_________TT______CC______TTCC___AA
22. _8213_1_>_FP
AA_________TT______CC______TTCC___AA
23. _8213_2_>_FP
AA_________TT______CC_________CC___AA
24. _8213_3_>_FP
AA_________TT______CC______TTCC___AA
25. _8213_4_>_FP
AA_________TT______CC______TTCC___AA
26. _5A_N3/467_T1
AA_________TT______CC______TTCC______
 85 86 87 88 89 90 91 92 93 94 95 96   
1. _GC-08-090-2-13
GGTTTTCCGGAATTCCAACCAAAAX_XX_X
2. _GC-08-090-2-13
GGTTTTCCGGAATTCCAACCAAAAX_XX_X
3. _GC-08-090-2-13
GGTTTTCCGGAATTCCAACCAAAAX_XX_X
4. _GC-08-090-2-13
GGTTTTCCGGAATTCCAACCAAAAX_XX_X
5. _GC-08-090-2-13
GGTTTTCCGGAATTCCAACCAAAAX_XX_X
6. _GC-08-090-2-13
GGTTTTCCGGAATTCCAACCAAAAX_XX_X
7. _GC-08-090-2-13
GGTTTTCCGGAATTCCAACCAAAAX_XX_X
8. _GC-08-090-2-13
GGTTTTCCGGAATTCCAACCAAAAX_XX_X
9. _GC-08-090-2-13
GGTTTTCCGGAATTCCAACCAAAAX_XX_X
10. _GC-08-090-2-13
GGTTTTCCGGAATTCCAACCAAAAX_XX_X
11. _GC-08-090-2-13
GGTTTTCCGGAATTCCAACCAAAAX_XX_X
12. _GC-08-090-2-13
GGTTTTCCGGAATTCCAACCAAAAX_XX_X
13. _GC-08-90-2-13
GGAAAAGGCCAAAACC___CCAAAAX_XX_X
14. _8213_5
___TT___CCGGAATT_______________X_XX_X
15. _8213_6
___TT___CCGGAATT_______________X_XX_X
16. _8213_7
___TT___CCGGAATT_______________X_XX_X
17. _8213_8
___TT___CCGGAATT_______________X_XX_X
18. _8213_9
___TT___CCGGAATT_______________X_XX_X
19. _8213_11
___TT___CCGGAATT_______________X_XX_X
20. _8213_13
___TT___CCGGAATT_______________X_XX_X
21. _8213_14
___TT___CCGGAATT_______________X_XX_X
22. _8213_1_>_FP
___TT___CCGGAATT_______________X_XX_X
23. _8213_2_>_FP
___TT___CCGGAATT_______________X_XX_X
24. _8213_3_>_FP
___TT___CCGGAATT_______________X_XX_X
25. _8213_4_>_FP
___TT___CCGGAATT_______________X_XX_X
26. _5A_N3/467_T1
_________CCGGAATT_______________X_XX_X

 Key

Mars Center for Cocoa Science Brazil

1._BE_10 GC-08-090-2-13
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018
2._BE_10 GC-08-090-2-13
Location: Tree: 2
Notes: 2 > FP2
 Mars, 2018
3._BE_10 GC-08-090-2-13
Location: Tree: 3
Notes: 3 > FP4
 Mars, 2018
4._BE_10 GC-08-090-2-13
Location: Tree: 4
Notes: 4 > FP3
 Mars, 2018
5._BE_10 GC-08-090-2-13
Location: Tree: 5
Notes: 5
 Mars, 2018
6._BE_10 GC-08-090-2-13
Location: Tree: 6
Notes: 6
 Mars, 2018
7._BE_10 GC-08-090-2-13
Location: Tree: 7
Notes: 7
 Mars, 2018
8._BE_10 GC-08-090-2-13
Location: Tree: 8
Notes: 8
 Mars, 2018
9._BE_10 GC-08-090-2-13
Location: Tree: 9
Notes: 9
 Mars, 2018
10._BE_10 GC-08-090-2-13
Location: Tree: 11
Notes: 11
 Mars, 2018
11._BE_10 GC-08-090-2-13
Location: Tree: 13
Notes: 13
 Mars, 2018
12._BE_10 GC-08-090-2-13
Location: Tree: 14
Notes: 14
 Mars, 2018
13._BE_10 GC-08-90-2-13
Location: Field: Nursery, Block: -, Rep: -, Tree: 5
Notes: MCCS_Structure_refs_above_0.9membership - Sample
 Mars, 2018
14._BE_10
Location: 8213 5
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016
15._BE_10
Location: 8213 6
 Dapeng Zhang, 2016
16._BE_10
Location: 8213 7
 Dapeng Zhang, 2016
17._BE_10
Location: 8213 8
 Dapeng Zhang, 2016
18._BE_10
Location: 8213 9
 Dapeng Zhang, 2016
19._BE_10
Location: 8213 11
 Dapeng Zhang, 2016
20._BE_10
Location: 8213 13
 Dapeng Zhang, 2016
21._BE_10
Location: 8213 14
 Dapeng Zhang, 2016
22._BE_10
Location: 8213 1 > FP
 Dapeng Zhang, 2016
23._BE_10
Location: 8213 2 > FP
 Dapeng Zhang, 2016
24._BE_10
Location: 8213 3 > FP
 Dapeng Zhang, 2016
25._BE_10
Location: 8213 4 > FP
 Dapeng Zhang, 2016

International Cocoa Genebank, Trinidad (ICG,T) Trinidad and Tobago

26._BE_10
Location: 5A N3/467 T1
 Dapeng Zhang, 2016

  Key to SNP Markers

1TcSNP25 2TcSNP28 3TcSNP32 4TcSNP42 5TcSNP60
6TcSNP75 7TcSNP90 8TcSNP122 9TcSNP144 10TcSNP150
11TcSNP151 12TcSNP154 13TcSNP174 14TcSNP193 15TcSNP226
16TcSNP230 17TcSNP240 18TcSNP242 19TcSNP316 20TcSNP329
21TcSNP364 22TcSNP372 23TcSNP413 24TcSNP418 25TcSNP429
26TcSNP430 27TcSNP448 28TcSNP469 29TcSNP497 30TcSNP521
31TcSNP529 32TcSNP534 33TcSNP547 34TcSNP560 35TcSNP561
36TcSNP577 37TcSNP591 38TcSNP602 39TcSNP606 40TcSNP619
41TcSNP645 42TcSNP653 43TcSNP689 44TcSNP701 45TcSNP702
46TcSNP723 47TcSNP731 48TcSNP751 49TcSNP776 50TcSNP799
51TcSNP823 52TcSNP836 53TcSNP860 54TcSNP872 55TcSNP878
56TcSNP891 57TcSNP894 58TcSNP899 59TcSNP917 60TcSNP929
61TcSNP944 62TcSNP953 63TcSNP994 64TcSNP998 65TcSNP999
66TcSNP1034 67TcSNP1041 68TcSNP1060 69TcSNP1062 70TcSNP1063
71TcSNP1075 72TcSNP1096 73TcSNP1111 74TcSNP1126 75TcSNP1144
76TcSNP1149 77TcSNP1156 78TcSNP1165 79TcSNP1175 80TcSNP1242
81TcSNP1253 82TcSNP1270 83TcSNP1309 84TcSNP1350 85TcSNP1383
86TcSNP1414 87TcSNP1439 88TcSNP1442 89TcSNP1458 90TcSNP1484
91TcSNP1520 92Tcm001s00947643 93Tcm002s20575712 94Tcm003s01336581 95Tcm003s07402719
96Tcm006s26664133