SNP Profiles of LCT EEN 163/A View Data

Show/Hide Profiles

	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	CT	CC	AA	GG	TT	AA	CC	CC	GG	CC	AA	AG	TT	CC
1._LCT_EEN_163_/A___	__	__	AA	__	__	__	__	__	GG	__	AA	__	__	__
2._LCT_EEN_163_/A___	__	__	AA	__	TT	AA	CC	CG	GG	__	__	AG	TT	CC
3._LCT_EEN_163_/A___	AG	CC	AA	CC	AA	AA	CC	GG	GG	GG	AA	AG	TT	CG

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	GG	AA	CC	GG	GG	CC	CC	TT	CC	TT	AA	TT	CC	CC
1._LCT_EEN_163_/A___	__	AA	__	__	GG	CC	CC	__	CC	TT	AA	__	CC	CC
2._LCT_EEN_163_/A___	__	__	__	__	GG	CC	CC	__	__	__	__	__	__	GG
3._LCT_EEN_163_/A___	__	AA	__	CC	GG	CC	GG	AA	__	AA	AA	AA	CC	GG

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	CC	TT	GG	AA	CC	CC	GG	GG	TT	GG	CC	CC	TT	CC
1._LCT_EEN_163_/A___	__	__	GG	AA	CC	__	__	__	__	GG	__	__	__	CC
2._LCT_EEN_163_/A___	CG	TT	__	__	__	CC	__	GG	TT	__	__	CC	__	GG
3._LCT_EEN_163_/A___	__	AA	GG	AA	__	GG	CC	GG	__	__	GG	GG	AA	GG

	43
_Input profile	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
1._LCT_EEN_163_/A___	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
2._LCT_EEN_163_/A___	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
3._LCT_EEN_163_/A___	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X

Input profile: LCT_EEN_163_/A RUQ_178

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

1._LCT_EEN_163_/A RUQ_178

identical
17 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

2._LCT_EEN_163_/A RUQ_178

85 %
20 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Location: GBR207

Jocelyn De Wever et al., 2019

3._LCT_EEN_163_/A RUQ_178

48.6 %
36 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

Key to SNP Markers

Key to SNP Markers

1	TcSNP75	2	TcSNP90	3	TcSNP144	4	TcSNP150	5	TcSNP151
6	TcSNP174	7	TcSNP193	8	TcSNP226	9	TcSNP230	10	TcSNP242
11	TcSNP329	12	TcSNP364	13	TcSNP372	14	TcSNP448	15	TcSNP469
16	TcSNP529	17	TcSNP534	18	TcSNP560	19	TcSNP577	20	TcSNP591
21	TcSNP602	22	TcSNP619	23	TcSNP702	24	TcSNP723	25	TcSNP731
26	TcSNP799	27	TcSNP823	28	TcSNP872	29	TcSNP878	30	TcSNP891
31	TcSNP899	32	TcSNP998	33	TcSNP999	34	TcSNP1060	35	TcSNP1063
36	TcSNP1111	37	TcSNP1126	38	TcSNP1253	39	TcSNP1309	40	TcSNP1439
41	TcSNP1442	42	TcSNP1458	43	TcSNP1484