SNP Profiles matching NA 95

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	CC	AA	CG	CT	TT	AA	CT	GT	CT	TT	AA	AA	CC	AG
1._NA_95	CC	AA	CG	CT	TT	AA	CT	GT	CT	TT	AA	AA	CC	AG
2._NA_95	CC	AA	CG	CT	TT	AA	CT	GT	CT	TT	AA	AA	CC	AG
3._NA_95	CC	AA	CG	CT	TT	AA	CT	GT	CT	TT	AA	AA	CC	AG
4._NA_95	CC	AA	CG	CT	TT	AA	CT	GT	CT	TT	AA	AA	CC	AG
5._NA_95	CC	AA	CG	CT	TT	AA	CT	GT	CT	TT	AA	AA	CC	AG
6._NA_95	CC	AA	CG	CT	TT	AA	CT	GT	CT	TT	AA	AA	CC	AG
7._NA_95	CC	AA	CG	CT	TT	AA	CT	GT	CT	TT	AA	AA	CC	AG
8._NA_95	CC	AA	CG	CT	TT	AA	CT	GT	CT	TT	AA	AA	CC	AG
9._NA_95	CC	AA	CG	CT	TT	AA	CT	GT	CT	TT	AA	AA	CC	AG
10._NA_95	CC	AA	CG	CT	TT	AA	CT	GT	CT	TT	AA	AA	CC	AG
11._GC-01-122-6-19	CC	AA	CG	CT	TT	AA	CT	GT	CT	TT	AA	AA	CC	AG
12._GC-01-122-6-19	CC	AA	CG	CT	TT	AA	CT	GT	CT	TT	AA	AA	CC	AG
13._GC-08-168-4-11	CC	AA	CG	CT	TT	AA	CT	GT	CT	TT	AA	AA	CC	AG
14._GC-08-168-4-11	CC	AA	CG	CT	TT	AA	CT	GT	CT	TT	AA	AA	CC	AG
15._GC-08-168-4-11	CC	AA	CG	CT	TT	AA	CT	GT	CT	TT	AA	AA	CC	AG
16._GC-08-168-4-11	CC	AA	CG	CT	TT	AA	CT	GT	CT	TT	AA	AA	CC	AG
17._GC-08-168-4-11	CC	AA	CG	CT	TT	AA	CT	GT	CT	TT	AA	AA	CC	AG
18._GC-08-168-4-11	CC	AA	CG	CT	TT	AA	CT	GT	CT	TT	AA	AA	CC	AG
19._GC-08-168-4-11	CC	AA	CG	CT	TT	AA	CT	GT	CT	TT	AA	AA	CC	AG
20._GC-08-168-4-11	CC	AA	CG	CT	TT	AA	CT	GT	CT	TT	AA	AA	CC	AG
21._GC-08-168-4-11	CC	AA	CG	CT	TT	AA	CT	GT	CT	TT	AA	AA	CC	AG
22._NA_95	CC	AA	CG	CT	TT	AA	CT	GT	CT	TT	AA	AA	CC	AG
23._GC-01-122-6-19	CC	AA	CG	CT	TT	AA	CT	GT	CT	TT	AA	AA	CC	AG
24._NA_95	CC	AA	CG	CT	TT	_	CT	GT	CT	TT	AA	AA	CC	AG
25._GC-08-168-4-11	CC	AA	CG	CT	TT	_	CT	GT	CT	TT	AA	AA	CC	AG

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	CT	AA	GG	TT	CC	GG	GT	GG	TT	AC	CC	TT	TT	CC
1._NA_95	CT	AA	GG	TT	CC	GG	GT	GG	TT	AC	CC	TT	TT	CC
2._NA_95	CT	AA	GG	TT	CC	GG	GT	GG	TT	AC	CC	TT	TT	CC
3._NA_95	CT	AA	GG	TT	CC	GG	GT	GG	TT	AC	CC	TT	TT	CC
4._NA_95	CT	AA	GG	TT	CC	GG	GT	GG	TT	AC	CC	TT	TT	CC
5._NA_95	CT	AA	GG	TT	CC	GG	GT	GG	TT	AC	CC	TT	TT	CC
6._NA_95	CT	AA	GG	TT	CC	GG	GT	GG	TT	AC	CC	TT	TT	CC
7._NA_95	CT	AA	GG	TT	CC	GG	GT	GG	TT	AC	CC	TT	TT	CC
8._NA_95	CT	AA	GG	TT	CC	GG	GT	GG	TT	AC	CC	TT	TT	CC
9._NA_95	CT	AA	GG	TT	CC	GG	GT	GG	TT	AC	CC	TT	TT	CC
10._NA_95	CT	AA	GG	TT	CC	GG	GT	GG	TT	AC	CC	TT	TT	CC
11._GC-01-122-6-19	CT	AA	GG	TT	CC	GG	GT	GG	TT	AC	CC	TT	TT	CC
12._GC-01-122-6-19	CT	AA	GG	TT	CC	GG	GT	GG	TT	AC	CC	TT	TT	CC
13._GC-08-168-4-11	CT	AA	GG	TT	CC	GG	GT	GG	TT	AC	CC	TT	TT	CC
14._GC-08-168-4-11	CT	AA	GG	TT	CC	GG	GT	GG	TT	AC	CC	TT	TT	CC
15._GC-08-168-4-11	CT	AA	GG	TT	CC	GG	GT	GG	TT	AC	CC	TT	TT	CC
16._GC-08-168-4-11	CT	AA	GG	TT	CC	GG	GT	GG	TT	AC	CC	TT	TT	CC
17._GC-08-168-4-11	CT	AA	GG	TT	CC	GG	GT	GG	TT	AC	CC	TT	TT	CC
18._GC-08-168-4-11	CT	AA	GG	TT	CC	GG	GT	GG	TT	AC	CC	TT	TT	CC
19._GC-08-168-4-11	CT	AA	GG	TT	CC	GG	GT	GG	TT	AC	CC	TT	TT	CC
20._GC-08-168-4-11	CT	AA	GG	TT	CC	GG	GT	GG	TT	AC	CC	TT	TT	CC
21._GC-08-168-4-11	CT	AA	GG	TT	CC	GG	GT	GG	TT	AC	CC	TT	TT	CC
22._NA_95	CT	AA	GG	TT	CC	GG	GT	GG	TT	AC	CC	TT	TT	CC
23._GC-01-122-6-19	CT	AA	GG	TT	CC	GG	GT	GG	TT	AC	CC	TT	TT	CC
24._NA_95	CT	AA	GG	TT	CC	GG	GT	GG	TT	AC	CC	TT	_	CC
25._GC-08-168-4-11	CT	AA	GG	TT	CC	GG	GT	GG	TT	AC	CC	TT	_	CC

	29	30	31	32	33	34	35	36	37	38	39	40
_Input profile	AG	GG	AT	CT	AA	CG	AC	CC	TT	CC	AT	GG	X_X	X_X
1._NA_95	AG	GG	AT	CT	AA	CG	AC	CC	TT	CC	AT	GG	X_X	X_X
2._NA_95	AG	GG	AT	CT	AA	CG	AC	CC	TT	CC	AT	GG	X_X	X_X
3._NA_95	AG	GG	AT	CT	AA	CG	AC	CC	TT	CC	AT	GG	X_X	X_X
4._NA_95	AG	GG	AT	CT	AA	CG	AC	CC	TT	CC	AT	GG	X_X	X_X
5._NA_95	AG	GG	AT	CT	AA	CG	AC	CC	TT	CC	AT	GG	X_X	X_X
6._NA_95	AG	GG	AT	CT	AA	CG	AC	CC	TT	CC	AT	GG	X_X	X_X
7._NA_95	AG	GG	AT	CT	AA	CG	AC	CC	TT	CC	AT	GG	X_X	X_X
8._NA_95	AG	GG	AT	CT	AA	CG	AC	CC	TT	CC	AT	GG	X_X	X_X
9._NA_95	AG	GG	AT	CT	AA	CG	AC	CC	TT	CC	AT	GG	X_X	X_X
10._NA_95	AG	GG	AT	CT	AA	CG	AC	CC	TT	CC	AT	GG	X_X	X_X
11._GC-01-122-6-19	AG	GG	AT	CT	AA	CG	AC	CC	TT	CC	AT	GG	X_X	X_X
12._GC-01-122-6-19	AG	GG	AT	CT	AA	CG	AC	CC	TT	CC	AT	GG	X_X	X_X
13._GC-08-168-4-11	AG	GG	AT	CT	AA	CG	AC	CC	TT	CC	AT	GG	X_X	X_X
14._GC-08-168-4-11	AG	GG	AT	CT	AA	CG	AC	CC	TT	CC	AT	GG	X_X	X_X
15._GC-08-168-4-11	AG	GG	AT	CT	AA	CG	AC	CC	TT	CC	AT	GG	X_X	X_X
16._GC-08-168-4-11	AG	GG	AT	CT	AA	CG	AC	CC	TT	CC	AT	GG	X_X	X_X
17._GC-08-168-4-11	AG	GG	AT	CT	AA	CG	AC	CC	TT	CC	AT	GG	X_X	X_X
18._GC-08-168-4-11	AG	GG	AT	CT	AA	CG	AC	CC	TT	CC	AT	GG	X_X	X_X
19._GC-08-168-4-11	AG	GG	AT	CT	AA	CG	AC	CC	TT	CC	AT	GG	X_X	X_X
20._GC-08-168-4-11	AG	GG	AT	CT	AA	CG	AC	CC	TT	CC	AT	GG	X_X	X_X
21._GC-08-168-4-11	AG	GG	AT	CT	AA	CG	AC	CC	TT	CC	AT	GG	X_X	X_X
22._NA_95	AG	GG	AT	CT	AA	CG	AC	CC	TT	_	AT	GG	X_X	X_X
23._GC-01-122-6-19	AG	GG	AT	CT	AA	CG	AC	CC	TT	_	AT	GG	X_X	X_X
24._NA_95	AG	GG	AT	CT	AA	CG	AC	CC	TT	CC	AT	GG	X_X	X_X
25._GC-08-168-4-11	AG	GG	AT	CT	AA	CG	AC	CC	TT	CC	AT	GG	X_X	X_X

Input profile: NA_95

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8411 1

Dapeng Zhang, 2016

1._NA_95

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8411 12

Dapeng Zhang, 2016

2._NA_95

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8411 11

Dapeng Zhang, 2016

3._NA_95

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8411 10

Dapeng Zhang, 2016

4._NA_95

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8411 9

Dapeng Zhang, 2016

5._NA_95

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8411 7

Dapeng Zhang, 2016

6._NA_95

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8411 6

Dapeng Zhang, 2016

7._NA_95

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8411 5

Dapeng Zhang, 2016

8._NA_95

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8411 2

Dapeng Zhang, 2016

9._NA_95

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1619 1 > FP

Dapeng Zhang, 2016

10._NA_95

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1619 12

Dapeng Zhang, 2016

Population Assignment:

Dapeng Zhang, 2016

11._NA_95 GC-01-122-6-19

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1 > FP1

12._NA_95 GC-01-122-6-19

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 12

Notes: 12

13._NA_95 GC-08-168-4-11

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1

14._NA_95 GC-08-168-4-11

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2

15._NA_95 GC-08-168-4-11

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 5

Notes: 5

16._NA_95 GC-08-168-4-11

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 6

Notes: 6

17._NA_95 GC-08-168-4-11

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 7

Notes: 7

18._NA_95 GC-08-168-4-11

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 9

Notes: 9

19._NA_95 GC-08-168-4-11

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 10

Notes: 10

20._NA_95 GC-08-168-4-11

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 11

Notes: 11

21._NA_95 GC-08-168-4-11

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 12

Notes: 12

22._NA_95

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1619 3 > FP

Dapeng Zhang, 2016

23._NA_95 GC-01-122-6-19

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3 > FP3

24._NA_95

identical
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8411 4

Dapeng Zhang, 2016

25._NA_95 GC-08-168-4-11

identical
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4

Key to SNP Markers

Key to SNP Markers

1	TcSNP1520	2	TcSNP1484	3	TcSNP1458	4	TcSNP1442	5	TcSNP1414
6	TcSNP1350	7	TcSNP1270	8	TcSNP1253	9	TcSNP1165	10	TcSNP1144
11	TcSNP1075	12	TcSNP1062	13	TcSNP1060	14	TcSNP998	15	TcSNP994
16	TcSNP953	17	TcSNP929	18	TcSNP917	19	TcSNP891	20	TcSNP872
21	TcSNP723	22	TcSNP645	23	TcSNP619	24	TcSNP591	25	TcSNP577
26	TcSNP560	27	TcSNP534	28	TcSNP529	29	TcSNP469	30	TcSNP429
31	TcSNP372	32	TcSNP242	33	TcSNP230	34	TcSNP226	35	TcSNP193
36	TcSNP151	37	TcSNP150	38	TcSNP144	39	TcSNP32	40	TcSNP25