SNP Profiles of EBC 148   View Data

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
1. _RUQ_1599
__________________________________________
2. _RUQ_1599
CTCC_________TT___CCGG____________GT
3. _RUQ_1599
______GGCCTT___GG______GGAACCAA___
4. _RUQ_1599
______________________________TTCC______
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
1. _RUQ_1599
___CC___CC___GG______AC___CGAG______
2. _RUQ_1599
ATCC____________CCGG___GT___AG______
3. _RUQ_1599
___CCAAGGATGG______AC___CGAGGGAA
4. _RUQ_1599
___CCTTCC___GG______AC___CGAG___TT
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
1. _RUQ_1599
_______________GGAACC____________CC___
2. _RUQ_1599
TTAA___AGAC____________CC____________
3. _RUQ_1599
______TTAG___GGAAGGAG___GGATGG___
4. _RUQ_1599
_________AG___GGAA_______________CCAA
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
1. _RUQ_1599
______________________________GG___AACT
2. _RUQ_1599
___AA___CCCC___AG_________GGATAACT
3. _RUQ_1599
AG___AA___CC______AGACGGGG___AAAG
4. _RUQ_1599
____________CCCT______GT___GG___AACT
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
1. _RUQ_1599
AA____________________________________TT
2. _RUQ_1599
______CTAACCAA___CG___TTGGGGTT___
3. _RUQ_1599
___GG____________AA___AA___CCGG___AA
4. _RUQ_1599
___CC_____________________TTGGGG______
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
1. _RUQ_1599
__________________GGGGGGCT____________
2. _RUQ_1599
______TTAAATCT___CC_________GG______
3. _RUQ_1599
ACAA___AA___CCGGGG___AGGGGGGGGG
4. _RUQ_1599
___TT___AA_________CCCC______GG______
 85 86 87 88 89 90 91 92 93 94 95 96 97 98
1. _RUQ_1599
_________TT_______________CG___CC______
2. _RUQ_1599
___CG______AACCCCAA______CC___GG___
3. _RUQ_1599
GG___AAAAAA_________AA______GGGGCC
4. _RUQ_1599
____________AACC_______________CC___GG
 99 100 101 102 103 104 105 106 107 108 109 110 111 112
1. _RUQ_1599
______GG___TT___________________________
2. _RUQ_1599
_________CT___CC_________AAGG___GTAT
3. _RUQ_1599
AAGGGG_________AAAGCC___CCAA______
4. _RUQ_1599
______GG___TT_______________GG_________
 113 114 115 116 117 118 119 120 121 122 123 124 125 126
1. _RUQ_1599
__________________CC___CG_______________
2. _RUQ_1599
_________AGGG_________CG______TTAT___
3. _RUQ_1599
AACCGG______AAGGAACGAGGG______AC
4. _RUQ_1599
TT_______________CCTTCGAG____________
 127 128 129            
1. _RUQ_1599
_________X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
2. _RUQ_1599
_________X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
3. _RUQ_1599
AAAAACX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
4. _RUQ_1599
_________X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X

 Key

International Cocoa Quarantine Centre, Reading (ICQC,R) United Kingdom

1._EBC_148 RUQ 1599
 Jocelyn De Wever et al., 2019
2._EBC_148 RUQ 1599
 Lambert Motilal, 2023
Population Assignment: 
3._EBC_148 RUQ 1599
Notes: Reading_Collection
 Mars, 2018
4._EBC_148 RUQ 1599
 Dapeng Zhang, 2014

  Key to SNP Markers

1TcSNP13 2TcSNP19 3TcSNP25 4TcSNP28 5TcSNP32
6TcSNP33 7TcSNP42 8TcSNP49 9TcSNP52 10TcSNP60
11TcSNP75 12TcSNP90 13TcSNP122 14TcSNP131 15TcSNP143
16TcSNP144 17TcSNP150 18TcSNP151 19TcSNP154 20TcSNP174
21TcSNP176 22TcSNP189 23TcSNP193 24TcSNP194 25TcSNP226
26TcSNP230 27TcSNP240 28TcSNP242 29TcSNP290 30TcSNP305
31TcSNP316 32TcSNP329 33TcSNP363 34TcSNP364 35TcSNP372
36TcSNP413 37TcSNP418 38TcSNP421 39TcSNP429 40TcSNP430
41TcSNP448 42TcSNP469 43TcSNP497 44TcSNP519 45TcSNP521
46TcSNP522 47TcSNP529 48TcSNP534 49TcSNP546 50TcSNP547
51TcSNP560 52TcSNP561 53TcSNP577 54TcSNP589 55TcSNP591
56TcSNP602 57TcSNP606 58TcSNP619 59TcSNP640 60TcSNP642
61TcSNP644 62TcSNP645 63TcSNP653 64TcSNP660 65TcSNP689
66TcSNP702 67TcSNP723 68TcSNP731 69TcSNP739 70TcSNP751
71TcSNP776 72TcSNP799 73TcSNP800 74TcSNP823 75TcSNP835
76TcSNP836 77TcSNP860 78TcSNP872 79TcSNP878 80TcSNP891
81TcSNP894 82TcSNP899 83TcSNP917 84TcSNP929 85TcSNP944
86TcSNP945 87TcSNP953 88TcSNP994 89TcSNP998 90TcSNP999
91TcSNP1010 92TcSNP1019 93TcSNP1034 94TcSNP1041 95TcSNP1053
96TcSNP1060 97TcSNP1062 98TcSNP1063 99TcSNP1075 100TcSNP1096
101TcSNP1111 102TcSNP1112 103TcSNP1126 104TcSNP1144 105TcSNP1149
106TcSNP1156 107TcSNP1175 108TcSNP1230 109TcSNP1253 110TcSNP1270
111TcSNP1275 112TcSNP1293 113TcSNP1309 114TcSNP1350 115TcSNP1383
116TcSNP1401 117TcSNP1404 118TcSNP1414 119TcSNP1439 120TcSNP1442
121TcSNP1458 122TcSNP1484 123TcSNP1520 124TcSNP1524 125TcSNP1527
126Tcm001s00947643 127Tcm003s01336581 128Tcm003s07402719 129Tcm006s26664133