SNP Profiles of "APA 4"   View Data

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
1. _APA4
__________________________________________
2. _RUQ_843
TTCC_________CC___CCGG____________TT
3. _RUQ_843
______GGAATT___GG______GGAACCGG___
4. _RUQ_843
______________________________TTCC______
5. _APA_4_Fld#_26_Plt#_1
______GGAATT___GG______GGAACCGG___
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
1. _APA4
___CC___CC___GG______AA___GGAA______
2. _RUQ_843
TTCC____________CCGG___TT___AA______
3. _RUQ_843
___CCAAGGTTGG______AA___GGAAGGGG
4. _RUQ_843
___CCTTCC___GG______AA___CCAA___CC
5. _APA_4_Fld#_26_Plt#_1
___CCAAGGTTGG______AA___GGAAGGGG
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
1. _APA4
_______________GGAATT____________CC___
2. _RUQ_843
TTAA___GGAA____________CC____________
3. _RUQ_843
______TTGG___GGAAAAGG___GGAAGG___
4. _RUQ_843
_________GG___GGAA_______________CCAA
5. _APA_4_Fld#_26_Plt#_1
______TTGG___GGAAAAGG___GGAAGG___
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
1. _APA4
___________________________CC___AACCAA
2. _RUQ_843
___CC___TTACGG_________CCTTAACC___
3. _RUQ_843
AA___CC___CC___GGAAAACC___AAGG___
4. _RUQ_843
____________CC______TT___CC___AACC___
5. _APA_4_Fld#_26_Plt#_1
AA___CC___CC___GGAAAACC___AAGG___
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
1. _APA4
____________________________________TT___
2. _RUQ_843
___TTAACCAA___GG___TTGGGGTT______
3. _RUQ_843
GG____________AA___AA___CCGG___AACC
4. _RUQ_843
CC_____________________TTGGGG_________
5. _APA_4_Fld#_26_Plt#_1
GG____________AA___AA___CCGG___AACC
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
1. _APA4
_______________GGCCGGCC_______________
2. _RUQ_843
___TTAATTTT___GG_________AA_________
3. _RUQ_843
AA___AA___CCGGCC___GGGGAAGGGGGG
4. _RUQ_843
TT___AA_________GGCCCC_______________
5. _APA_4_Fld#_26_Plt#_1
AA___AA___CCGGCC___GGGGAAGGGGGG
 85 86 87 88 89 90 91 92 93 94 95 96 97 98
1. _APA4
______CC_______________GG___CC_________
2. _RUQ_843
CC______GGTTCCAA______CC___AA______
3. _RUQ_843
___AAGGGG_________AA______GGAACCAA
4. _RUQ_843
_________GGTT_______________CC___GG___
5. _APA_4_Fld#_26_Plt#_1
___AAGGGG_________AA______GGAACCAA
 99 100 101 102 103 104 105 106 107 108 109 110 111 112
1. _APA4
___AA___TT______________________________
2. _RUQ_843
______TT___CC_________TTAACCTT___GG
3. _RUQ_843
GGAA_________AAGGCC_________AAAA___
4. _RUQ_843
___AA___TT_____________________TT______
5. _APA_4_Fld#_26_Plt#_1
GGAA_________AAGGCC_________AAAA___
 113 114 115 116 117 118 119 120 121 122 123 124 125 126
1. _APA4
_____________________TT___CC____________
2. _RUQ_843
TT_________GGGG_________GG______TTAA
3. _RUQ_843
___GGAAGG______AAAAGGCCAAGG______
4. _RUQ_843
___CC_______________TTCCGGAA_________
5. _APA_4_Fld#_26_Plt#_1
___GGAAGG______AAAAGGCCAAGG______
 127 128 129 130           
1. _APA4
____________X_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
2. _RUQ_843
____________X_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
3. _RUQ_843
CCAAAAAAX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
4. _RUQ_843
____________X_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
5. _APA_4_Fld#_26_Plt#_1
CCAAAAAAX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X

 Key

Center for Forestry Research and Technology Transfer Vietnam

1._APA_4
 Jocelyn De Wever et al., 2019

International Cocoa Quarantine Centre, Reading (ICQC,R) United Kingdom

2._APA_4 RUQ 843
 Lambert Motilal, 2023
3._APA_4 RUQ 843
Notes: Reading_Collection
 Mars, 2018
4._APA_4 RUQ 843
 Dapeng Zhang, 2014

USDA-TARS United States of America

5._APA_4 APA 4_Fld#_26_Plt#_1
Location: Field: 26, Tree: 1
 Mars, 2018

  Key to SNP Markers

1TcSNP13 2TcSNP19 3TcSNP25 4TcSNP28 5TcSNP32
6TcSNP33 7TcSNP42 8TcSNP49 9TcSNP52 10TcSNP60
11TcSNP75 12TcSNP90 13TcSNP122 14TcSNP131 15TcSNP143
16TcSNP144 17TcSNP150 18TcSNP151 19TcSNP154 20TcSNP174
21TcSNP176 22TcSNP189 23TcSNP193 24TcSNP194 25TcSNP226
26TcSNP230 27TcSNP240 28TcSNP242 29TcSNP290 30TcSNP305
31TcSNP316 32TcSNP329 33TcSNP363 34TcSNP364 35TcSNP372
36TcSNP413 37TcSNP418 38TcSNP421 39TcSNP429 40TcSNP430
41TcSNP448 42TcSNP469 43TcSNP497 44TcSNP519 45TcSNP521
46TcSNP522 47TcSNP529 48TcSNP546 49TcSNP547 50TcSNP560
51TcSNP561 52TcSNP577 53TcSNP589 54TcSNP591 55TcSNP602
56TcSNP606 57TcSNP619 58TcSNP640 59TcSNP642 60TcSNP644
61TcSNP645 62TcSNP653 63TcSNP660 64TcSNP689 65TcSNP702
66TcSNP723 67TcSNP731 68TcSNP739 69TcSNP751 70TcSNP776
71TcSNP799 72TcSNP800 73TcSNP823 74TcSNP835 75TcSNP836
76TcSNP860 77TcSNP872 78TcSNP878 79TcSNP891 80TcSNP894
81TcSNP899 82TcSNP917 83TcSNP929 84TcSNP944 85TcSNP945
86TcSNP953 87TcSNP994 88TcSNP998 89TcSNP999 90TcSNP1010
91TcSNP1019 92TcSNP1034 93TcSNP1041 94TcSNP1053 95TcSNP1060
96TcSNP1062 97TcSNP1063 98TcSNP1075 99TcSNP1096 100TcSNP1111
101TcSNP1112 102TcSNP1126 103TcSNP1144 104TcSNP1149 105TcSNP1156
106TcSNP1175 107TcSNP1205 108TcSNP1230 109TcSNP1237 110TcSNP1253
111TcSNP1270 112TcSNP1275 113TcSNP1293 114TcSNP1309 115TcSNP1350
116TcSNP1383 117TcSNP1401 118TcSNP1404 119TcSNP1414 120TcSNP1439
121TcSNP1442 122TcSNP1458 123TcSNP1484 124TcSNP1520 125TcSNP1524
126TcSNP1527 127Tcm001s00947643 128Tcm003s01336581 129Tcm003s07402719 130Tcm006s26664133