SNP Profiles of POUND 18   View Data

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
1._POUND 18___
______GGGGTT___GG______CCTTCCTT___
2._POUND 18___
______GGGGTT___GG______CCTTCCTT___
3._POUND 18___
______GGGGTT___GG______CCTTCCTT___
4._POUND 18___
______GGGGTT___GG______CC___CCTT___
5._POUND 18___
______GGGGTT___GG______CCTTCCTT___
6._POUND 18___
______GGGGTT___GG______CCTTCCTT___
7._POUND 18___
______GGGGTT___GG______CCTTCCTT___
8._POUND 18___
______GGGGTT___GG______CCTTCCTT___
9._POUND 18___
______GGGGTT___GG______CCTTCCTT___
10._POUND 18___
______GGCCTT___GG______GGAACCAA___
11._POUND 18___
______GG___TT___________________________
12._POUND 18___
______GG___TT___________________________
13._POUND 18___
______GG___TT___________________________
14._POUND 18___
______GG___TT___________________________
15._POUND 18___
______GG___TT___________________________
16._POUND 18___
______GG___TT___________________________
17._POUND 18___
______GG___TT___________________________
18._POUND 18___
______GG___TT___________________________
19._POUND 18___
______GG___TT___________________________
20._POUND 18___
CTCC_________TT___CCGG____________GT
21._POUND 18___
CTCC_________TT___CCGG____________GT
22._POUND 18___
______GGCCTT___GG______GGAACCAA___
23._POUND 18___
______________________________TTCC______
24._POUND 18___
______GG___TT___________________________
25._POUND 18___
______GG___TT___________________________
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
1._POUND 18___
___ACGTCTTTGG______CC___CGAAGGCT
2._POUND 18___
___ACGTCTTTGG______CC___CGAAGGCT
3._POUND 18___
___ACGTCTTTGG______CC___CGAAGGCT
4._POUND 18___
___ACGTCTTTGG______CC___CGAAGGCT
5._POUND 18___
___ACGTCTTTGG______CC___CGAAGGCT
6._POUND 18___
___ACGTCTTTGG______CC___CGAAGGCT
7._POUND 18___
___ACGTCTTTGG______CC___CGAAGGCT
8._POUND 18___
___ACGTCTTTGG______CC___CGAAGGCT
9._POUND 18___
___ACGTCTTTGG______CC___CGAAGGCT
10._POUND 18___
___ACACAGAAGG______CC___CGAAGGAG
11._POUND 18___
___ACGTCT____________CC___CGAA___CT
12._POUND 18___
___ACGTCT____________CC___CGAA___CT
13._POUND 18___
___ACGTCT____________CC___CGAA___CT
14._POUND 18___
___ACGTCT____________CC___CGAA___CT
15._POUND 18___
___ACGTCT____________CC___CGAA___CT
16._POUND 18___
___ACGTCT____________CC___CGAA___CT
17._POUND 18___
___ACGTCT____________CC___CGAA___CT
18._POUND 18___
___ACGTCT____________CC___CGAA___CT
19._POUND 18___
___ACGTCT____________CC___CGAA___CT
20._POUND 18___
ATAC____________CCAG___GT___AA______
21._POUND 18___
ATAC____________CCAG___GT___AA______
22._POUND 18___
___ACACAGAAGG______CC___CGAAGGAG
23._POUND 18___
___ACGTCT___GG______CC___CGAA___CT
24._POUND 18___
___ACGTCT____________CC___CGAA___CT
25._POUND 18___
___ACGTCT____________CC______AA___CT
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
1._POUND 18___
______AAAG___GGAACCAG___GGAACCAA
2._POUND 18___
______AAAG___GGAACCAG___GGAACCAA
3._POUND 18___
______AAAG___GGAACCAG___GGAACCAA
4._POUND 18___
______AAAG___GGAACCAG___GGAACCAA
5._POUND 18___
______AAAG___GGAACCAG___GGAACCAA
6._POUND 18___
______AAAG___GGAACCAG___GGAACCAA
7._POUND 18___
______AAAG___GGAACCAG___GGAACCAA
8._POUND 18___
______AAAG___GGAACCAG___GGAACCAA
9._POUND 18___
______AAAG___GGAACCAG___GGAACCAA
10._POUND 18___
______TTAG___GGAAGGAG___GGAAGG___
11._POUND 18___
__________________AA_________GG______AA
12._POUND 18___
__________________AA_________GG______AA
13._POUND 18___
__________________AA_________GG______AA
14._POUND 18___
__________________AA_________GG______AA
15._POUND 18___
__________________AA_________GG______AA
16._POUND 18___
__________________AA_________GG______AA
17._POUND 18___
__________________AA_________GG______AA
18._POUND 18___
__________________AA_________GG______AA
19._POUND 18___
__________________AA_________GG______AA
20._POUND 18___
TTAA___AGAA____________CC____________
21._POUND 18___
TTAA___AGAA____________CC____________
22._POUND 18___
______TTAG___GGAAGGAG___GGAAGG___
23._POUND 18___
_________AG___GGAA_______________CCAA
24._POUND 18___
__________________AA_________AG______AA
25._POUND 18___
__________________AA_________GG______AA
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
1._POUND 18___
______AA___ACCT___GGGTGGGG___ACCC
2._POUND 18___
______AA___ACCT___GGGTGGGG___ACCC
3._POUND 18___
______AA___ACCT___GGGTGGGG___ACCC
4._POUND 18___
______AA___ACCT___GGGTGGGG___ACCC
5._POUND 18___
______AA___ACCT___GGGTGGGG___ACCC
6._POUND 18___
____________ACCT___GGGTGGGG___ACCC
7._POUND 18___
______AA___ACCT___GGGTGGGG___ACCC
8._POUND 18___
______AA___ACCT___GGGTGGGG___ACCC
9._POUND 18___
______AA___ACCT___GGGTGGGG___ACCC
10._POUND 18___
AG___AA___AC______GGACGGGG___ACGG
11._POUND 18___
____________ACCT______GT___GG___AC___
12._POUND 18___
____________ACCT______GT___GG___AC___
13._POUND 18___
____________ACCT______GT___GG___AC___
14._POUND 18___
____________ACCT______GT___GG___AC___
15._POUND 18___
____________ACCT______GT___GG___AC___
16._POUND 18___
____________ACCT______GT___GG___AC___
17._POUND 18___
____________ACCT______GT___GG___AC___
18._POUND 18___
____________ACCT______GT___GG___AC___
19._POUND 18___
____________ACCT______GT___GG___AC___
20._POUND 18___
___AA___CCAC___AG_________GGTTACCC
21._POUND 18___
___AA___CCAC___AG_________GGTTACCC
22._POUND 18___
AG___AA___AC______GGACGGGG___ACGG
23._POUND 18___
____________ACCT______GT___GG___ACCC
24._POUND 18___
____________ACCT______GT___GG___AC___
25._POUND 18___
____________ACCT______GT___GG___AC___
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
1._POUND 18___
AGCC_________AAAA___AATTCCGGGG___
2._POUND 18___
AGCC_________AAAA___AATTCCGGGG___
3._POUND 18___
AGCC_________AAAA___AATTCCGGGG___
4._POUND 18___
AGCC_________AAAA___AATTCCGGGG___
5._POUND 18___
AGCC_________AAAA___AATTCCGGGG___
6._POUND 18___
AGCC_________AAAA___AATTCCGGGG___
7._POUND 18___
AGCC_________AAAA___AATTCCGGGG___
8._POUND 18___
AGCC_________AAAA___AATTCCGGGG___
9._POUND 18___
AGCC_________AAAA___AATTCCGGGG___
10._POUND 18___
___GG____________AA___AA______CCGG___
11._POUND 18___
___CC_________AA_______________GG______
12._POUND 18___
___CC_________AA_______________GG______
13._POUND 18___
___CC_________AA_______________GG______
14._POUND 18___
___CC_________AA_______________GG______
15._POUND 18___
___CC_________AA_______________GG______
16._POUND 18___
___CC_________AA_______________GG______
17._POUND 18___
___CC_________AA_______________GG______
18._POUND 18___
___CC_________AA_______________GG______
19._POUND 18___
___CC_________AA_______________GG______
20._POUND 18___
______TTAGCCAA___CG______TTGGGGCT
21._POUND 18___
______TTAGCCAA___CG______TTGGGGCT
22._POUND 18___
___GG____________AA___AA______CCGG___
23._POUND 18___
___CC________________________TTGGGG___
24._POUND 18___
___CC_________AA_______________GG______
25._POUND 18___
___CC_________AA_______________GG______
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
1._POUND 18___
TTGTTT___AC___CG___CCCCCTCCGGCC
2._POUND 18___
TTGTTT___AC___CG___CCCCCTCCGGCC
3._POUND 18___
TTGTTT___AC___CG___CCCCCTCCGGCC
4._POUND 18___
TTGTTT___AC___CG___CCCCCTCCGGCC
5._POUND 18___
TTGTTT___AC___CG___CCCCCTCCGGCC
6._POUND 18___
TTGTTT___AC___CG___CCCCCTCCGGCC
7._POUND 18___
TTGTTT___AC___CG___CCCCCTCCGGCC
8._POUND 18___
TTGTTT___AC___CG___CCCCCTCCGGCC
9._POUND 18___
TTGTTT___AC___CG___CCCCCTCCGGCC
10._POUND 18___
AAACAA___AC___CGGGGG___AGGGGGGG
11._POUND 18___
________________________CC___CT______CC
12._POUND 18___
________________________CC___CT______CC
13._POUND 18___
________________________CC___CT______CC
14._POUND 18___
________________________CC___CT______CC
15._POUND 18___
________________________CC___CT______CC
16._POUND 18___
________________________CC___CT______CC
17._POUND 18___
________________________CC___CT______CC
18._POUND 18___
________________________CC___CT______CC
19._POUND 18___
________________________CC___CT______CC
20._POUND 18___
_________TTACATCT___CC_________GG___
21._POUND 18___
_________TTACATCT___CC_________GG___
22._POUND 18___
AAACAA___AC___CGGGGG___AGGGGGGG
23._POUND 18___
______TT___AC_________CCCCTT_________
24._POUND 18___
________________________CC___CT______CC
25._POUND 18___
________________________CC___CT______CC
 85 86 87 88 89 90 91 92 93 94 95 96 97 98
1._POUND 18___
GGCC___AATTAACC______TTCG___CCGG
2._POUND 18___
GGCC___AATTAACC______TTCG___CCGG
3._POUND 18___
GGCC___AATTAACC______TTCG___CCGG
4._POUND 18___
GGCC___AATTAACC______TTCG___CCGG
5._POUND 18___
GGCC___AATTAACC______TTCG___CCGG
6._POUND 18___
GGCC___AATTAACC______TTCG___CCGG
7._POUND 18___
GGCC___AATTAACC______TTCG___CCGG
8._POUND 18___
GGCC___AATTAACC______TTCG___CCGG
9._POUND 18___
GGCC___AATTAACC______TTCG___CCGG
10._POUND 18___
GGGG___AAAAAA_________AA______GGGG
11._POUND 18___
GG______AATTAA__________________CCGG
12._POUND 18___
GG______AATTAA__________________CCGG
13._POUND 18___
GG______AATTAA__________________CCGG
14._POUND 18___
GG______AATTAA__________________CCGG
15._POUND 18___
GG______AATTAA__________________CCGG
16._POUND 18___
GG______AATTAA__________________CCGG
17._POUND 18___
GG______AATTAA__________________CCGG
18._POUND 18___
GG______AATTAA__________________CCGG
19._POUND 18___
GG______AATTAA__________________CCGG
20._POUND 18___
______CC______AACCCCAA______CC___GG
21._POUND 18___
______CC______AACCCCAA______CC___GG
22._POUND 18___
GGGG___AAAAAA_________AA______GGGG
23._POUND 18___
_______________AACC_______________CC___
24._POUND 18___
GG______AATTAA__________________CCGG
25._POUND 18___
GG______AATTAA__________________CCGG
 99 100 101 102 103 104 105 106 107 108 109 110 111 112
1._POUND 18___
GGAACCGG___TTCCTTCTCCGG______CC
2._POUND 18___
GGAACCGG___TTCCTTCTCCGG______CC
3._POUND 18___
GGAACCGG___TTCCTTCTCCGG______CC
4._POUND 18___
GGAACCGG___TTCCTTCTCCGG______CC
5._POUND 18___
GGAACCGG___TTCCTTCTCCGG______CC
6._POUND 18___
GGAACCGG___TTCCTTCTCCGG______CC
7._POUND 18___
GGAACCGG___TTCCTTCTCCGG______CC
8._POUND 18___
GGAACCGG___TTCCTTCTCCGG______CC
9._POUND 18___
GGAACCGG___TTCCTTCTCCGG______CC
10._POUND 18___
CCAAGGGG_________AAAG___CC_________
11._POUND 18___
___AA____________CC______CC____________
12._POUND 18___
___AA____________CC______CC____________
13._POUND 18___
___AA____________CC______CC____________
14._POUND 18___
___AA____________CC______CC____________
15._POUND 18___
___AA____________CC______CC____________
16._POUND 18___
___AA____________CC______CC____________
17._POUND 18___
___AA____________CC______CC____________
18._POUND 18___
___AA____________CC______CC____________
19._POUND 18___
___AA____________CC______CC____________
20._POUND 18___
____________CC___CC____________GGAA___
21._POUND 18___
____________CC___CC____________GGAA___
22._POUND 18___
CCAAGGGG_________AAAG___CC_________
23._POUND 18___
GG______GG___TT________________________
24._POUND 18___
___AA____________CC______CC____________
25._POUND 18___
___AA____________CC______CC____________
 113 114 115 116 117 118 119 120 121 122 123 124 125 126
1._POUND 18___
GTTT______TTCCGG______CTCCTTCGAA
2._POUND 18___
GTTT______TTCCGG______CTCCTTCGAA
3._POUND 18___
GTTT______TTCCGG______CTCCTTCGAA
4._POUND 18___
GTTT______TTCCGG______CTCCTTCGAA
5._POUND 18___
GTTT______TTCCGG______CTCCTTCGAA
6._POUND 18___
GTTT______TTCCGG______CTCCTTCGAA
7._POUND 18___
GTTT______TTCCGG______CTCCTTCGAA
8._POUND 18___
GTTT______TTCCGG______CTCCTTCGAA
9._POUND 18___
GTTT______TTCCGG______CTCCTTCGAA
10._POUND 18___
ACAA______AACCGG______AGGGAACGAA
11._POUND 18___
GTTT_________CC_________CT___TTCGAA
12._POUND 18___
GTTT_________CC_________CT___TTCGAA
13._POUND 18___
GTTT_________CC_________CT___TTCGAA
14._POUND 18___
GTTT_________CC_________CT___TTCGAA
15._POUND 18___
GTTT_________CC_________CT___TTCGAA
16._POUND 18___
GTTT_________CC_________CT___TTCGAA
17._POUND 18___
GTTT_________CC_________CT___TTCGAA
18._POUND 18___
GTTT_________CC_________CT___TTCGAA
19._POUND 18___
GTTT_________CC_________CT___TTCGAA
20._POUND 18___
GT___GTTT_________AGAG_________CG___
21._POUND 18___
GT___GTTT_________AGAG_________CG___
22._POUND 18___
ACAA______AACCGG______AGGGAACGAA
23._POUND 18___
GT_________TT_______________CCTTCGAA
24._POUND 18___
GTTT_________CC_________CT___TTCGAG
25._POUND 18___
GTTT_________CC_________CT___TTCGAA
 127 128 129 130 131 132 133 134       
1._POUND 18___
CC______CCAGAAAACCX_XX_XX_XX_XX_XX_X
2._POUND 18___
CC______CCAGAAAACCX_XX_XX_XX_XX_XX_X
3._POUND 18___
CC______CCAGAAAACCX_XX_XX_XX_XX_XX_X
4._POUND 18___
CC______CCAGAAAACCX_XX_XX_XX_XX_XX_X
5._POUND 18___
CC______CCAGAAAACCX_XX_XX_XX_XX_XX_X
6._POUND 18___
CC______CCAGAAAACCX_XX_XX_XX_XX_XX_X
7._POUND 18___
CC______CCAGAAAACCX_XX_XX_XX_XX_XX_X
8._POUND 18___
CC______CCAGAAAACCX_XX_XX_XX_XX_XX_X
9._POUND 18___
CC______CCAGAAAACCX_XX_XX_XX_XX_XX_X
10._POUND 18___
GG______CC___AAAACCX_XX_XX_XX_XX_XX_X
11._POUND 18___
CC_____________________X_XX_XX_XX_XX_XX_X
12._POUND 18___
CC_____________________X_XX_XX_XX_XX_XX_X
13._POUND 18___
CC_____________________X_XX_XX_XX_XX_XX_X
14._POUND 18___
CC_____________________X_XX_XX_XX_XX_XX_X
15._POUND 18___
CC_____________________X_XX_XX_XX_XX_XX_X
16._POUND 18___
CC_____________________X_XX_XX_XX_XX_XX_X
17._POUND 18___
CC_____________________X_XX_XX_XX_XX_XX_X
18._POUND 18___
CC_____________________X_XX_XX_XX_XX_XX_X
19._POUND 18___
CC_____________________X_XX_XX_XX_XX_XX_X
20._POUND 18___
___TTAT_______________X_XX_XX_XX_XX_XX_X
21._POUND 18___
___TTAT_______________X_XX_XX_XX_XX_XX_X
22._POUND 18___
GG______CC___AAAACCX_XX_XX_XX_XX_XX_X
23._POUND 18___
________________________X_XX_XX_XX_XX_XX_X
24._POUND 18___
CC_____________________X_XX_XX_XX_XX_XX_X
25._POUND 18___
CC_____________________X_XX_XX_XX_XX_XX_X

 Key

Mars Center for Cocoa Science Brazil

1._POUND_18 GC-08-064-1-86

Location: Tree: 1
Notes: 1
 Mars, 2018

2._POUND_18 GC-08-064-1-86

Location: Tree: 2
Notes: 2 > FP2
 Mars, 2018

3._POUND_18 GC-08-064-1-86

Location: Tree: 3
Notes: 3
 Mars, 2018

4._POUND_18 GC-08-064-1-86

Location: Tree: 4
Notes: 4
 Mars, 2018

5._POUND_18 GC-08-064-1-86

Location: Tree: 6
Notes: 6
 Mars, 2018

6._POUND_18 GC-08-064-1-86

Location: Tree: 7
Notes: 7
 Mars, 2018

7._POUND_18 GC-08-064-1-86

Location: Tree: 9
Notes: 9
 Mars, 2018

8._POUND_18 GC-08-064-1-86

Location: Tree: 11
Notes: 11
 Mars, 2018

9._POUND_18 GC-08-064-1-86

Location: Tree: 12
Notes: 12
 Mars, 2018

10._POUND_18 GC-08-64-1-86

Location: Field: 8, Block: 1, Rep: 86, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

11._POUND_18

Location: 8186 1
 Dapeng Zhang, 2016

12._POUND_18

Location: 8186 3
 Dapeng Zhang, 2016

13._POUND_18

Location: 8186 4
 Dapeng Zhang, 2016

14._POUND_18

Location: 8186 6
 Dapeng Zhang, 2016

15._POUND_18

Location: 8186 7
 Dapeng Zhang, 2016

16._POUND_18

Location: 8186 9
 Dapeng Zhang, 2016

17._POUND_18

Location: 8186 11
 Dapeng Zhang, 2016

18._POUND_18

Location: 8186 12
 Dapeng Zhang, 2016

19._POUND_18

Location: 8186 2 > FP
 Dapeng Zhang, 2016

International Cocoa Quarantine Centre, Reading (ICQC,R) United Kingdom

20._POUND_18 RUQ 874

 Lambert Motilal, 2023
Population Assignment: 

21._POUND_18 RUQ 874B

 Lambert Motilal, 2023

22._POUND_18 RUQ 874

Notes: Reading_Collection
 Mars, 2018

23._POUND_18 RUQ 874

 Dapeng Zhang, 2014

24._POUND_18 RUQ 874

 Dapeng Zhang, 2016

International Cocoa Genebank, Trinidad (ICG,T) Trinidad and Tobago

25._POUND_18

Location: 6B F447 T2
 Dapeng Zhang, 2016

  Key to SNP Markers

1TcSNP13 2TcSNP19 3TcSNP25 4TcSNP28 5TcSNP32
6TcSNP33 7TcSNP42 8TcSNP49 9TcSNP52 10TcSNP60
11TcSNP75 12TcSNP90 13TcSNP122 14TcSNP131 15TcSNP143
16TcSNP144 17TcSNP150 18TcSNP151 19TcSNP154 20TcSNP174
21TcSNP176 22TcSNP189 23TcSNP193 24TcSNP194 25TcSNP226
26TcSNP230 27TcSNP240 28TcSNP242 29TcSNP290 30TcSNP305
31TcSNP316 32TcSNP329 33TcSNP363 34TcSNP364 35TcSNP372
36TcSNP413 37TcSNP418 38TcSNP421 39TcSNP429 40TcSNP430
41TcSNP448 42TcSNP469 43TcSNP497 44TcSNP519 45TcSNP521
46TcSNP522 47TcSNP529 48TcSNP534 49TcSNP546 50TcSNP547
51TcSNP560 52TcSNP561 53TcSNP577 54TcSNP589 55TcSNP591
56TcSNP602 57TcSNP606 58TcSNP619 59TcSNP640 60TcSNP642
61TcSNP644 62TcSNP645 63TcSNP653 64TcSNP660 65TcSNP689
66TcSNP701 67TcSNP702 68TcSNP723 69TcSNP731 70TcSNP739
71TcSNP751 72TcSNP776 73TcSNP799 74TcSNP800 75TcSNP823
76TcSNP835 77TcSNP836 78TcSNP860 79TcSNP872 80TcSNP878
81TcSNP891 82TcSNP894 83TcSNP899 84TcSNP917 85TcSNP929
86TcSNP944 87TcSNP945 88TcSNP953 89TcSNP994 90TcSNP998
91TcSNP999 92TcSNP1010 93TcSNP1019 94TcSNP1034 95TcSNP1041
96TcSNP1053 97TcSNP1060 98TcSNP1062 99TcSNP1063 100TcSNP1075
101TcSNP1096 102TcSNP1111 103TcSNP1112 104TcSNP1126 105TcSNP1144
106TcSNP1149 107TcSNP1156 108TcSNP1165 109TcSNP1175 110TcSNP1205
111TcSNP1230 112TcSNP1242 113TcSNP1253 114TcSNP1270 115TcSNP1275
116TcSNP1293 117TcSNP1309 118TcSNP1350 119TcSNP1383 120TcSNP1401
121TcSNP1404 122TcSNP1414 123TcSNP1439 124TcSNP1442 125TcSNP1458
126TcSNP1484 127TcSNP1520 128TcSNP1524 129TcSNP1527 130Tcm001s00947643
131Tcm002s20575712 132Tcm003s01336581 133Tcm003s07402719 134Tcm006s26664133