SNP Profiles of GU 310 /P   View Data

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
1._GU 310 /P___
______GG___AT___________________________
2._GU 310 /P___
______GG___AT___________________________
3._GU 310 /P___
______GG___AT___________________________
4._GU 310 /P___
______GG___AT___________________________
5._GU 310 /P___
______GG___AT___________________________
6._GU 310 /P___
TTAC_________TT___CCGG____________TT
7._GU 310 /P___
______GGCCAT___GG______GGAACCAA___
8._GU 310 /P___
______________________________TTCC______
9._GU 310 /P___
______GG___AT___________________________
10._GU 310 /P___
______GG___AT___________________________
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
1._GU 310 /P___
___AATTTT____________AA___CCGG___CC
2._GU 310 /P___
___AATTTT____________AA___CCGG___CC
3._GU 310 /P___
___AATTTT____________AA___CCGG___CC
4._GU 310 /P___
___AATTTT____________AA___CCGG___CC
5._GU 310 /P___
___AATTTT____________AA___CCGG___CC
6._GU 310 /P___
AAAA____________CCGG___GG___GG______
7._GU 310 /P___
___AAAAAATTGG______AA___GGGGGGGG
8._GU 310 /P___
___AATTTT___GG______AA___CCGG___CC
9._GU 310 /P___
___AATTTT____________AA___CCGG___CC
10._GU 310 /P___
___AATTTT____________AA______GG___CC
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
1._GU 310 /P___
__________________AA_________GG______GG
2._GU 310 /P___
__________________AA_________GG______GG
3._GU 310 /P___
__________________AA_________GG______GG
4._GU 310 /P___
__________________AA_________GG______GG
5._GU 310 /P___
__________________AA_________GG______GG
6._GU 310 /P___
CCAA___GGAA____________TT____________
7._GU 310 /P___
______TTGG___GGAAAAGG___GGTTGG___
8._GU 310 /P___
_________GG___GGAA_______________CCGG
9._GU 310 /P___
__________________AA_________GG______GG
10._GU 310 /P___
__________________AA_________AG______GG
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
1._GU 310 /P___
____________AACC______GG___CC___CC___
2._GU 310 /P___
____________AACC______GG___CC___CC___
3._GU 310 /P___
____________AACC______GG___CC___CC___
4._GU 310 /P___
____________AACC______GG___CC___CC___
5._GU 310 /P___
____________AACC____________CC___CC___
6._GU 310 /P___
___CC___CCAA___AA_________CCATCCCC
7._GU 310 /P___
AA___CC___AA______GGCCGGCC___CCGG
8._GU 310 /P___
____________AACC______GG___CC___CCCC
9._GU 310 /P___
____________AACC______GG___CC___CC___
10._GU 310 /P___
____________AACC______GG___CC___CC___
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
1._GU 310 /P___
CC_________GG____________GG____________
2._GU 310 /P___
CC_________GG____________GG____________
3._GU 310 /P___
CC_________GG____________GG____________
4._GU 310 /P___
CC_________GG____________GG____________
5._GU 310 /P___
CC_________GG____________GG____________
6._GU 310 /P___
___CTAACCAA___CC___CCGGAACT______
7._GU 310 /P___
GG____________GG___AA___CCAA___AAAA
8._GU 310 /P___
CC_____________________CCGGAA_________
9._GU 310 /P___
CC_________AA____________GG____________
10._GU 310 /P___
CC_________AA____________GG____________
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
1._GU 310 /P___
__________________GG___CC______CCGG___
2._GU 310 /P___
__________________GG___CC______CCGG___
3._GU 310 /P___
__________________GG___CC______CCGG___
4._GU 310 /P___
__________________GG___CC______CCGG___
5._GU 310 /P___
__________________GG___CC______CCGG___
6._GU 310 /P___
___TTAAAACT___GG_________GG_________
7._GU 310 /P___
AA___AA___CCGGCC___GGGGGGGGGGGG
8._GU 310 /P___
TT___AA_________GGCCCC_______________
9._GU 310 /P___
__________________GG___CC______CCGG___
10._GU 310 /P___
__________________GG___CC______CCGG___
 85 86 87 88 89 90 91 92 93 94 95 96 97 98
1._GU 310 /P___
___AACCAA_______________CCGG___AA___
2._GU 310 /P___
______CCAA_______________CCGG___AA___
3._GU 310 /P___
___AACCAA_______________CCGG___AA___
4._GU 310 /P___
___AACCAA_______________CCGG___AA___
5._GU 310 /P___
___AACCAA_______________CCGG___AA___
6._GU 310 /P___
CC______AACCCTAA___CT___GG_________
7._GU 310 /P___
___AAGGAA_________AA___GGGGCCAAGG
8._GU 310 /P___
_________AACC____________CC___GG______
9._GU 310 /P___
___AACCAA_______________CCGG___AA___
10._GU 310 /P___
___AACCAA_______________CCGG___AA___
 99 100 101 102 103 104 105 106 107 108 109 110 111 112
1._GU 310 /P___
_________CC______CC_________TTTT______
2._GU 310 /P___
_________CC______CC_________TTTT______
3._GU 310 /P___
_________CC______CC_________TTTT______
4._GU 310 /P___
_________CC______CC_________TTTT______
5._GU 310 /P___
_________CC______CC_________TTTT______
6._GU 310 /P___
___TT___CC____________GGAATT___GGTT
7._GU 310 /P___
GG_________AAGG___AA______AAAA______
8._GU 310 /P___
GG___TT_____________________TT_________
9._GU 310 /P___
_________CC______CC_________TTTT______
10._GU 310 /P___
_________CC______CC_________TTTT______
 113 114 115 116 117 118 119 120 121 122 123 124 125 126
1._GU 310 /P___
_______________TT___CCGGGGCC_________
2._GU 310 /P___
_______________TT___CCGGGGCC_________
3._GU 310 /P___
_______________TT___CCGGGGCC_________
4._GU 310 /P___
_______________TT___CCGGGGCC_________
5._GU 310 /P___
_______________TT___CCGGGGCC_________
6._GU 310 /P___
_________AAGG_________GG______TTAA___
7._GU 310 /P___
AACCGG______AAGGGGCCGGGG______CC
8._GU 310 /P___
TT_______________CCCCGGGG____________
9._GU 310 /P___
___CC_________TT___CCGGGGCC_________
10._GU 310 /P___
___CC_________TT___CCGGGGCC_________
 127 128 129            
1._GU 310 /P___
_________X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
2._GU 310 /P___
_________X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
3._GU 310 /P___
_________X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
4._GU 310 /P___
_________X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
5._GU 310 /P___
_________X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
6._GU 310 /P___
_________X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
7._GU 310 /P___
AAAACCX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
8._GU 310 /P___
_________X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
9._GU 310 /P___
_________X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
10._GU 310 /P___
_________X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X

 Key

Mars Center for Cocoa Science Brazil

1._GU_310_/P

Location: 8840 1
 Dapeng Zhang, 2016

2._GU_310_/P

Location: 8840 2
 Dapeng Zhang, 2016

3._GU_310_/P

Location: 8840 3
 Dapeng Zhang, 2016

4._GU_310_/P

Location: 8840 4
 Dapeng Zhang, 2016

5._GU_310_/P

Location: 8840 5
 Dapeng Zhang, 2016

International Cocoa Quarantine Centre, Reading (ICQC,R) United Kingdom

6._GU_310_/P RUQ 815

 Lambert Motilal, 2023
Population Assignment: 

7._GU_310_/P RUQ 815

Notes: Reading_Collection
 Mars, 2018

8._GU_310_/P RUQ 815

 Dapeng Zhang, 2014

9._GU_310_/P RUQ 815

 Dapeng Zhang, 2016

International Cocoa Genebank, Trinidad (ICG,T) Trinidad and Tobago

10._GU_310_/P

Location: CAMPUS 1 A X1 Y33
 Dapeng Zhang, 2016

  Key to SNP Markers

1TcSNP13 2TcSNP19 3TcSNP25 4TcSNP28 5TcSNP32
6TcSNP33 7TcSNP42 8TcSNP49 9TcSNP52 10TcSNP60
11TcSNP75 12TcSNP90 13TcSNP122 14TcSNP131 15TcSNP143
16TcSNP144 17TcSNP150 18TcSNP151 19TcSNP154 20TcSNP174
21TcSNP176 22TcSNP189 23TcSNP193 24TcSNP194 25TcSNP226
26TcSNP230 27TcSNP240 28TcSNP242 29TcSNP290 30TcSNP305
31TcSNP316 32TcSNP329 33TcSNP363 34TcSNP364 35TcSNP372
36TcSNP413 37TcSNP418 38TcSNP421 39TcSNP429 40TcSNP430
41TcSNP448 42TcSNP469 43TcSNP497 44TcSNP519 45TcSNP521
46TcSNP522 47TcSNP529 48TcSNP534 49TcSNP546 50TcSNP547
51TcSNP560 52TcSNP561 53TcSNP577 54TcSNP589 55TcSNP591
56TcSNP602 57TcSNP619 58TcSNP640 59TcSNP642 60TcSNP644
61TcSNP645 62TcSNP653 63TcSNP660 64TcSNP689 65TcSNP702
66TcSNP723 67TcSNP731 68TcSNP739 69TcSNP751 70TcSNP776
71TcSNP799 72TcSNP800 73TcSNP823 74TcSNP835 75TcSNP836
76TcSNP860 77TcSNP872 78TcSNP878 79TcSNP891 80TcSNP894
81TcSNP899 82TcSNP917 83TcSNP929 84TcSNP944 85TcSNP945
86TcSNP953 87TcSNP994 88TcSNP998 89TcSNP999 90TcSNP1010
91TcSNP1019 92TcSNP1034 93TcSNP1053 94TcSNP1060 95TcSNP1062
96TcSNP1063 97TcSNP1075 98TcSNP1096 99TcSNP1111 100TcSNP1112
101TcSNP1126 102TcSNP1144 103TcSNP1149 104TcSNP1156 105TcSNP1165
106TcSNP1175 107TcSNP1205 108TcSNP1230 109TcSNP1253 110TcSNP1270
111TcSNP1275 112TcSNP1293 113TcSNP1309 114TcSNP1350 115TcSNP1383
116TcSNP1401 117TcSNP1404 118TcSNP1414 119TcSNP1439 120TcSNP1442
121TcSNP1458 122TcSNP1484 123TcSNP1520 124TcSNP1524 125TcSNP1527
126Tcm001s00947643 127Tcm003s01336581 128Tcm003s07402719 129Tcm006s26664133