SNP Profiles of ICS-95   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
AAAACTCCAGAGCTCCCTCTGGCTCCCC
1._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCCC
2._ICS_95___
AAAACTCCAGAGCTCC__CTGGCTCCCC
3._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCCC
4._ICS_95___
AAAACTCC________CTCTGG__CC__
5._ICS_95___
AAAACTCC________CTCTGG__CC__
6._ICS_95___
AAAACTCC________CTCTGG__CC__
7._ICS_95___
AAAACTCC________CTCTGG__CC__
8._ICS_95___
AAAACTCC________CTCTGG__CC__
9._ICS_95___
AAAACTCC________CTCTGG__CC__
10._ICS_95___
AAAACTCC________CTCTGG__CC__
11._ICS_95___
AAAACTCC________CTCTGG__CC__
12._ICS_95___
AAAACTCC________CTCTGG__CC__
13._ICS_95___
AAAACTCC________CTCTGG__CC__
14._ICS_95___
AAAACTCC________CTCTGG__CC__
15._ICS_95___
AAAACTCC________CTCTGG__CC__
16._ICS_95___
AAAACTCC________CTCTGG__CC__
17._ICS_95___
AAAACTCC________CTCTGG__CC__
18._ICS_95___
AAAACTCC________CTCTGG__CC__
19._ICS_95___
AAAACTCC________CTCTGG__CC__
20._ICS_95___
AAAACTCC________CTCTGG__CC__
21._ICS_95___
AAAACTCC________CTCTGG__CC__
22._ICS_95___
AAAACTCC________CTCTGG______
23._ICS_95___
AAAACTCC________CTCTGG__CC__
24._ICS_95___
AA__CTCC________CTCTGG__CC__
25._ICS_95___
AAAACTCC________CTCTGG__CC__
26._ICS_95___
AAAACTCC________CTCTGG__CC__
27._ICS_95___
AAAACTCC________CTCTGG__CC__
28._ICS_95___
AAAACTCC________CTCTGG__CC__
29._ICS_95___
AAAACTCC________CTCTGG__CC__
30._ICS_95___
AAAACTCC__________CTGG__CC__
31._ICS_95___
AAAACTCC________CTCTGG__CC__
32._ICS_95___
AAAACTCC________CTCTGG__CC__
33._ICS_95___
AAAACTCC________CTCTGG__CC__
34._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCCC
35._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCCC
36._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCCC
37._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCCC
38._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCCC
39._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCCC
40._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCCC
41._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCCC
42._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCCC
43._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCCC
44._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCCC
45._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCCC
46._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCCC
47._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCCC
48._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCT__CC
49._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCCC
50._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCC__
51._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCCC
52._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCCC
53._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCCC
54._ICS_95___
AA__CTCCAGAGCTCCCTCTGGCTCCCC
55._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCCC
56._ICS_95___
AAAACTCC________CTCTGG__CC__
57._ICS_95___
____CTCC____CC__CT____CTCC__
58._ICS_95___
______CC________CT______CC__
59._ICS_95___
______CC____CC______________
60._ICS_95___
______CC____CC______________
61._ICS_95___
AAAA__CCAGAG__GGAG__GGAGGGGG
62._ICS_95___
AAAA__CCAGAG__GGAG__GGAGGGGG
63._ICS_95___
AAAA__CCAGAG__GGAG__GGAGGGGG
64._ICS_95___
AAAA__CCAGAG__GGAG__GGAGGGGG
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
ATCCAAAAGGCGGGCTAGTTAGATATCG
1._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
2._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
3._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
4._ICS_95___
______AA____GG________ATAT__
5._ICS_95___
______AA____GG________ATAT__
6._ICS_95___
______AA____GG________ATAT__
7._ICS_95___
______AA____GG________ATAT__
8._ICS_95___
______AA____GG________ATAT__
9._ICS_95___
______AA____GG________ATAT__
10._ICS_95___
______AA____GG________ATAT__
11._ICS_95___
______AA____GG________ATAT__
12._ICS_95___
______AA____GG________ATAT__
13._ICS_95___
______AA____GG________ATAT__
14._ICS_95___
______AA____GG________ATAT__
15._ICS_95___
______AA____GG________ATAT__
16._ICS_95___
______AA____GG________ATAT__
17._ICS_95___
______AA____GG________ATAT__
18._ICS_95___
______AA____GG________ATAT__
19._ICS_95___
______AA____GG________ATAT__
20._ICS_95___
______AA____GG________ATAT__
21._ICS_95___
______AA____GG________ATAT__
22._ICS_95___
______AA____GG________ATAT__
23._ICS_95___
______AA____GG________ATAT__
24._ICS_95___
______AA____GG________ATAT__
25._ICS_95___
______AA____GG________ATAT__
26._ICS_95___
______AA____GG________ATAT__
27._ICS_95___
______AA____GG________ATAT__
28._ICS_95___
______AA____GG________ATAT__
29._ICS_95___
______AA____GG________ATAT__
30._ICS_95___
______AA____GG________ATAT__
31._ICS_95___
______AA____GG________ATAT__
32._ICS_95___
______AA____GG________ATAT__
33._ICS_95___
______AA____GG________ATAT__
34._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
35._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
36._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
37._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
38._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
39._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
40._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
41._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
42._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
43._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
44._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
45._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
46._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
47._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
48._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
49._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
50._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
51._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
52._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
53._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
54._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
55._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
56._ICS_95___
______AA____GG________ATAT__
57._ICS_95___
__________CG________AG__ATCG
58._ICS_95___
____AG____CG__CT____AG__ATCG
59._ICS_95___
______AATT__________________
60._ICS_95___
______AATT__________________
61._ICS_95___
ATCCAGAACC__GGAGAAAAAGATATCG
62._ICS_95___
ATCCAGAACC__GGAGAAAAAGATATCG
63._ICS_95___
ATCCAGAACC__GGAGAAAAAGATATCG
64._ICS_95___
ATCCAGAACC__GGAGAAAAAGATATCG
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
CGAACTGTGGCCACAAGTGGGTAGCTAA
1._ICS_95___
CG__CTGTGGCCACAAGTGGGTAGCTAA
2._ICS_95___
CGAACTGTGGCCACAAGTGGGTAGCTAA
3._ICS_95___
CGAACTGTGGCCACAAGTGGGTAGCTAA
4._ICS_95___
CGAA______CC__AAGT____AG____
5._ICS_95___
CGAA______CC__AAGT____AG____
6._ICS_95___
CGAA______CC__AAGT____AG____
7._ICS_95___
CGAA______CC__AAGT____AG____
8._ICS_95___
CGAA______CC__AAGT____AG____
9._ICS_95___
CGAA______CC__AAGT____AG____
10._ICS_95___
CGAA______CC__AAGT____AG____
11._ICS_95___
CGAA______CC__AAGT____AG____
12._ICS_95___
CGAA______CC__AAGT____AG____
13._ICS_95___
CGAA______CC__AAGT____AG____
14._ICS_95___
CGAA______CC__AAGT____AG____
15._ICS_95___
CGAA______CC__AAGT____AG____
16._ICS_95___
CGAA______CC__AAGT____AG____
17._ICS_95___
CGAA______CC__AAGT____AG____
18._ICS_95___
CGAA______CC__AAGT____AG____
19._ICS_95___
CGAA______CC__AAGT____AG____
20._ICS_95___
CGAA______CC__AAGT____AG____
21._ICS_95___
CGAA______CC__AAGT____AG____
22._ICS_95___
CGAA______CC__AAGT____AG____
23._ICS_95___
CGAA______CC__AAGT____AG____
24._ICS_95___
CGAA______CC__AAGT____AG____
25._ICS_95___
CG________CC__AAGT____AG____
26._ICS_95___
CGAA______CC__AAGT____AG____
27._ICS_95___
CGAA______CC__AAGT____AG____
28._ICS_95___
CGAA______CC__AAGT____AG____
29._ICS_95___
CG________CC__AAGT____AG____
30._ICS_95___
CGAA______CC__AAGT____AG____
31._ICS_95___
CGAA______CC__AAGT____AG____
32._ICS_95___
CGAA______CC__AAGT____AG____
33._ICS_95___
CGAA______CC__AAGT____AG____
34._ICS_95___
CGAACTGTGGCCACAAGTGGGTAGCTAA
35._ICS_95___
CGAACTGTGGCCACAAGTGGGTAGCTAA
36._ICS_95___
CGAACTGTGGCCACAAGTGGGTAGCTAA
37._ICS_95___
CGAACTGTGGCCACAAGTGGGTAGCTAA
38._ICS_95___
CGAACTGTGGCCACAAGTGGGTAGCTAA
39._ICS_95___
CGAACTGTGGCCACAAGTGGGTAGCTAA
40._ICS_95___
CGAACTGTGGCCACAAGTGGGTAGCTAA
41._ICS_95___
CGAACTGTGGCCACAAGTGGGTAGCTAA
42._ICS_95___
CGAACTGTGGCCACAAGTGGGTAGCTAA
43._ICS_95___
CGAACTGTGGCCACAAGTGGGTAGCTAA
44._ICS_95___
CGAACTGTGGCCACAAGTGGGTAGCTAA
45._ICS_95___
CGAACTGTGGCCACAAGTGGGTAGCTAA
46._ICS_95___
CGAACTGTGGCCACAAGTGGGTAGCTAA
47._ICS_95___
CGAACTGTGGCCACAAGTGGGTAGCTAA
48._ICS_95___
CGAACTGTGGCCACAAGTGGGTAGCTAA
49._ICS_95___
CGAACTGTGGCCACAAGTGGGTAGCTAA
50._ICS_95___
CGAACTGTGGCCACAAGTGGGTAGCTAA
51._ICS_95___
CGAACTGTGGCCACAAGTGGGTAGCTAA
52._ICS_95___
CG__CTGTGGCCACAAGTGGGTAGCTAA
53._ICS_95___
CGAACTGTGGCCACAAGTGGGTAGCTAA
54._ICS_95___
CGAACTGTGGCCACAAGTGGGTAGCTAA
55._ICS_95___
CGAACTGTGGCCACAAGTGGGTAGCTAA
56._ICS_95___
CGAA______CC__AAGT____AG____
57._ICS_95___
CG______GGCCACAAGT____AGCT__
58._ICS_95___
CG______GGCC________GT__CT__
59._ICS_95___
CG________CC____________CT__
60._ICS_95___
CG________CC__AA____________
61._ICS_95___
CGAAAGACGGCCACAAACCCACAGAGAA
62._ICS_95___
CGAAAGACGGCCACAAACCCACAGAGAA
63._ICS_95___
CGAAAGACGGCCACAAACCCACAGAGAA
64._ICS_95___
CGAAAGACGGCCACAAACCCACAGAGAA
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
CTCCGTATCCAGAGAGCTCCGGGGGTTT
1._ICS_95___
CTCCGTATCCAGAGAGCTCCGGGGGTTT
2._ICS_95___
CTCCGTATCCAGAGAGCTCCGGGGGTTT
3._ICS_95___
CTCCGTATCCAG__AGCTCCGGGGGTTT
4._ICS_95___
________CC__________________
5._ICS_95___
________CC__________________
6._ICS_95___
________CC__________________
7._ICS_95___
________CC__________________
8._ICS_95___
________CC__________________
9._ICS_95___
________CC__________________
10._ICS_95___
________CC__________________
11._ICS_95___
________CC__________________
12._ICS_95___
________CC__________________
13._ICS_95___
________CC__________________
14._ICS_95___
________CC__________________
15._ICS_95___
________CC__________________
16._ICS_95___
________CC__________________
17._ICS_95___
________CC__________________
18._ICS_95___
________CC__________________
19._ICS_95___
________CC__________________
20._ICS_95___
________CC__________________
21._ICS_95___
________CC__________________
22._ICS_95___
________CC__________________
23._ICS_95___
________CC__________________
24._ICS_95___
________CC__________________
25._ICS_95___
________CC__________________
26._ICS_95___
________CC__________________
27._ICS_95___
________CC__________________
28._ICS_95___
________CC__________________
29._ICS_95___
________CC__________________
30._ICS_95___
________CC__________________
31._ICS_95___
________CC__________________
32._ICS_95___
________CC__________________
33._ICS_95___
________CC__________________
34._ICS_95___
__CCGTATCCAGAGAGCTCCGGGGGTTT
35._ICS_95___
__CCGTATCCAGAGAGCTCCGGGGGTTT
36._ICS_95___
__CCGTATCCAGAGAGCTCCGGGGGTTT
37._ICS_95___
__CCGTATCCAGAGAGCTCCGGGGGTTT
38._ICS_95___
__CCGTATCCAGAGAGCTCCGGGGGTTT
39._ICS_95___
__CCGTATCCAGAGAGCTCCGGGGGTTT
40._ICS_95___
__CCGTATCCAGAGAGCTCCGGGGGTTT
41._ICS_95___
__CCGTATCCAGAGAGCTCCGGGGGTTT
42._ICS_95___
__CCGTATCCAGAGAGCTCCGGGGGTTT
43._ICS_95___
__CCGTATCCAGAGAGCTCCGGGGGTTT
44._ICS_95___
__CCGTATCCAGAGAGCTCCGGGGGTTT
45._ICS_95___
__CCGTATCCAGAGAGCTCCGGGGGTTT
46._ICS_95___
__CCGTATCCAGAGAGCTCCGGGGGTTT
47._ICS_95___
__CCGTATCCAGAGAGCTCCGGGGGTTT
48._ICS_95___
__CCGTATCCAGAGAGCTCCGGGGGTTT
49._ICS_95___
__CCGTATCCAGAGAGCTCCGGGGGTTT
50._ICS_95___
__CCGTATCCAGAGAGCTCCGGGGGTTT
51._ICS_95___
__CCGTATCCAGAGAGCTCCGGGGGTTT
52._ICS_95___
__CCGTATCCAGAGAGCTCCGGGGGTTT
53._ICS_95___
__CCGTATCCAGAGAGCTCCGGGGGTTT
54._ICS_95___
__CCGTATCCAGAGAGCTCCGGGGGTTT
55._ICS_95___
__CCGTATCCAGAGAGCTCCGGGGGTTT
56._ICS_95___
________CC__________________
57._ICS_95___
____GTAT____AG____________CT
58._ICS_95___
______AT__AG________________
59._ICS_95___
____________AG______________
60._ICS_95___
____________________________
61._ICS_95___
AGGGAC__GG__AGAGAG__GGGGACAG
62._ICS_95___
AGGGAC__GG__AGAGAG__GGGGACAG
63._ICS_95___
AGGGAC__GG__AGAGAG__GGGGACAG
64._ICS_95___
AGGGAC__GG__AGAGAG__GGGGACAG
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
CTCTGTAGCGCTTTACGGAAACGGGTTT
1._ICS_95___
CTCTGTAGCGCTTTACGGAAACGGGTTT
2._ICS_95___
CT__GTAGCGCTTTACGGAAACGGGTTT
3._ICS_95___
CTCTGTAGCGCTTTACGGAAACGGGTTT
4._ICS_95___
CTCT____CG__TTACGG__ACGGGTTT
5._ICS_95___
CTCT____CG__TTACGG__ACGGGTTT
6._ICS_95___
CTCT____CG__TTACGG__ACGGGTTT
7._ICS_95___
CTCT____CG__TTACGG__ACGGGTTT
8._ICS_95___
CTCT____CG__TTACGG__ACGGGTTT
9._ICS_95___
CTCT____CG__TTACGG__ACGGGTTT
10._ICS_95___
CTCT____CG__TTACGG__ACGGGTTT
11._ICS_95___
CTCT____CG__TTACGG__ACGGGTTT
12._ICS_95___
CTCT____CG__TTACGG__ACGGGTTT
13._ICS_95___
CTCT____CG__TTACGG__ACGGGTTT
14._ICS_95___
CTCT____CG__TTACGG__ACGGGTTT
15._ICS_95___
CTCT____CG__TTACGG__ACGGGTTT
16._ICS_95___
CTCT____CG__TTACGG__ACGGGTTT
17._ICS_95___
CTCT____CG__TTACGG__ACGGGTTT
18._ICS_95___
CTCT____CG__TTACGG__ACGGGTTT
19._ICS_95___
CTCT____CG__TTACGG__ACGGGTTT
20._ICS_95___
CTCT____CG__TTACGG__ACGGGTTT
21._ICS_95___
CTCT____CG__TTACGG__ACGGGTTT
22._ICS_95___
CTCT____CG__TTACGG__ACGGGTTT
23._ICS_95___
CTCT____CG__TTACGG__ACGGGTTT
24._ICS_95___
CTCT____CG__TTACGG__ACGGGTTT
25._ICS_95___
CTCT____CG__TTACGG__ACGGGTTT
26._ICS_95___
CTCT____CG__TTACGG__ACGGGTTT
27._ICS_95___
CTCT____CG__TTACGG__ACGGGTTT
28._ICS_95___
CTCT____CG__TTACGG__AC__GT__
29._ICS_95___
CTCT____CG__TTACGG__ACGGGTTT
30._ICS_95___
CT______CG__TTACGG__ACGGGTTT
31._ICS_95___
CTCT____CG__TTACGG__ACGGGTTT
32._ICS_95___
CTCT____CG__TTACGG__ACGGGTTT
33._ICS_95___
CTCT____CG__TTACGG__ACGGGTTT
34._ICS_95___
CTCTGTAGCGCTTTACGGAAACGGGTTT
35._ICS_95___
CTCTGTAGCGCTTTACGGAAACGGGTTT
36._ICS_95___
CTCTGTAGCGCTTTACGGAAACGGGTTT
37._ICS_95___
CTCTGTAGCGCTTTACGGAAACGGGTTT
38._ICS_95___
CTCTGTAGCGCTTTACGGAAACGGGTTT
39._ICS_95___
CTCTGTAGCGCTTTACGGAAACGGGTTT
40._ICS_95___
CTCTGTAGCGCTTTACGGAAACGGGTTT
41._ICS_95___
CTCTGTAGCGCTTTACGGAAACGGGTTT
42._ICS_95___
CTCTGTAGCGCTTTACGGAAACGGGTTT
43._ICS_95___
CTCTGTAGCGCTTTACGGAAACGGGTTT
44._ICS_95___
CTCTGTAGCGCTTTACGGAAACGGGTTT
45._ICS_95___
CTCTGTAGCGCTTTACGGAAACGGGTTT
46._ICS_95___
CTCTGTAGCGCTTTACGGAAACGGGTTT
47._ICS_95___
CTCTGTAGCGCTTTACGGAAACGGGTTT
48._ICS_95___
CTCTGTAGCGCTTTACGGAAACGGGTTT
49._ICS_95___
CTCTGTAGCGCTTTACGGAAACGGGTTT
50._ICS_95___
CTCTGTAGCGCTTTACGGAAACGGGTTT
51._ICS_95___
CTCTGTAGCGCTTTACGGAAACGGGTTT
52._ICS_95___
CTCTGTAGCGCTTTACGGAAACGGGTTT
53._ICS_95___
CTCTGTAGCGCTTTACGGAAACGGGTTT
54._ICS_95___
CTCTGTAGCGCTTTACGGAAACGGGTTT
55._ICS_95___
CTCTGTAGCGCTTTACGGAAAC__GT__
56._ICS_95___
CTCT____GG__TTACGG__ACGGGTTT
57._ICS_95___
CT__GTGGCGCTTTAC__AAACGGGTTT
58._ICS_95___
CT______CGCT__AC__AAACGG____
59._ICS_95___
______AG____________ACGG__TT
60._ICS_95___
______AG____________ACGG__TT
61._ICS_95___
AGAGACAGCGAGAAACGGAAACGGACAA
62._ICS_95___
AGAGACAGCGAGAAACGGAAACGGACAA
63._ICS_95___
AGAGACAGCGAGAAACGGAAACGGACAA
64._ICS_95___
AGAGACAGCGAGAAACGGAAACGGACAA
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
_Input profile
AGCCCCTTACAGACAAAGCCCGCTAAAC
1._ICS_95___
AGCCCCTTACAGACAAAGCCCGCTAAAC
2._ICS_95___
AGCCCCTTACAGACAAAGCCCGCTAAAC
3._ICS_95___
AGCCCCTTACAGACAAAGCCCGCTAAAC
4._ICS_95___
______TT__________CCCG______
5._ICS_95___
______TT__________CCCG______
6._ICS_95___
______TT__________CCCG______
7._ICS_95___
______TT__________CCCG______
8._ICS_95___
______TT__________CCCG______
9._ICS_95___
______TT__________CCCG______
10._ICS_95___
______TT__________CCCG______
11._ICS_95___
______TT__________CCCG______
12._ICS_95___
______TT__________CCCG______
13._ICS_95___
______TT__________CCCG______
14._ICS_95___
______TT__________CCCG______
15._ICS_95___
______TT__________CCCG______
16._ICS_95___
______TT__________CCCG______
17._ICS_95___
______TT__________CCCG______
18._ICS_95___
______TT__________CCCG______
19._ICS_95___
______TT__________CCCG______
20._ICS_95___
______TT__________CCCG______
21._ICS_95___
______TT__________CCCG______
22._ICS_95___
______TT__________CCCG______
23._ICS_95___
______TT__________CCCG______
24._ICS_95___
______TT__________CCCG______
25._ICS_95___
______TT__________CCCG______
26._ICS_95___
______TT__________CCCG______
27._ICS_95___
______TT__________CC________
28._ICS_95___
______TT__________CCCG______
29._ICS_95___
______TT__________CCCG______
30._ICS_95___
______TT__________CCCG______
31._ICS_95___
______TT__________CCGG______
32._ICS_95___
______TT__________CCGG______
33._ICS_95___
______TT__________CCGG______
34._ICS_95___
AGCCCCTTACAGACAAAGCCCGCTAAAC
35._ICS_95___
AGCCCCTTACAGACAAAGCCCGCTAAAC
36._ICS_95___
AGCCCCTTACAGACAAAGCCCGCTAAAC
37._ICS_95___
AGCCCCTTACAGACAAAGCCCGCTAAAC
38._ICS_95___
AGCCCCTTACAGACAAAGCCCGCTAAAC
39._ICS_95___
AGCCCCTTACAGACAAAGCCCGCTAAAC
40._ICS_95___
AGCCCCTTACAGACAAAGCCCGCTAAAC
41._ICS_95___
AGCCCCTTACAGACAAAGCCCGCTAAAC
42._ICS_95___
AGCCCCTTACAGACAAAGCCCGCTAAAC
43._ICS_95___
AGCCCCTTACAGACAAAGCCCGCTAAAC
44._ICS_95___
AGCCCCTTACAGACAAAGCCCGCTAAAC
45._ICS_95___
AGCCCCTTACAGACAAAGCCCGCTAAAC
46._ICS_95___
AGCCCCTTACAGACAAAGCCCGCTAAAC
47._ICS_95___
AGCCCCTTACAGACAAAGCCCGCTAAAC
48._ICS_95___
AGCCCCTTACAGACAAAGCCCGCTAAAC
49._ICS_95___
AGCCCCTTACAGACAAAGCCCGCTAA__
50._ICS_95___
AGCCCCTTACAGACAAAGCCCGCTAAAC
51._ICS_95___
AGCCCCTTACAGACAAAGCCCGCTAAAC
52._ICS_95___
AGCCCCTTACAGACAAAGCCCGCTAAAC
53._ICS_95___
AGCCCCTTACAGACAAAGCCCGCTAAAC
54._ICS_95___
AGCCCCTTACAGACAAAGCCCGCTAAAC
55._ICS_95___
AGCC__TTACAGACAAAGCCCGCTAAAC
56._ICS_95___
______TT__________CCGG______
57._ICS_95___
AG________________CCCG____AC
58._ICS_95___
____CC______________CC______
59._ICS_95___
AG________________ACCG____AC
60._ICS_95___
AG________________ACCG____AC
61._ICS_95___
AG____AAACAGACAA__CCCCAGAAAC
62._ICS_95___
AG____AAACAGACAA__CCCCAGAAAC
63._ICS_95___
AG____AAACAGACAA__CCCCAGAAAC
64._ICS_95___
AG____AAACAGACAA__CCCCAGAAAC
 85 86 87 88 89 90 91 92 93 94 95    
_Input profile
CTCTCTTTAGCTCTGTTTCCCCX_XX_XX_X
1._ICS_95___
CTCTCTTTAGCTCT__TTCCCCX_XX_XX_X
2._ICS_95___
CT__CTTTAGCTCT__TTCCCCX_XX_XX_X
3._ICS_95___
CT__CTTTAGCTCTGTTT____X_XX_XX_X
4._ICS_95___
CTCTCT__AG__CTGTTT____X_XX_XX_X
5._ICS_95___
CTCTCT__AG__CTGTTT____X_XX_XX_X
6._ICS_95___
CTCTCT__AG__CTGTTT____X_XX_XX_X
7._ICS_95___
CTCTCT__AG__CTGTTT____X_XX_XX_X
8._ICS_95___
CTCTCT__AG__CTGTTT____X_XX_XX_X
9._ICS_95___
CTCTCT__AG__CTGTTT____X_XX_XX_X
10._ICS_95___
CTCTCT__AG__CTGTTT____X_XX_XX_X
11._ICS_95___
CTCTCT__AG__CTGTTT____X_XX_XX_X
12._ICS_95___
CTCTCT__AG__CTGTTT____X_XX_XX_X
13._ICS_95___
CTCTCT__AG__CTGTTT____X_XX_XX_X
14._ICS_95___
CTCTCT__AG__CTGTTT____X_XX_XX_X
15._ICS_95___
CTCTCT__AG__CTGTTT____X_XX_XX_X
16._ICS_95___
CTCTCT__AG__CTGTTT____X_XX_XX_X
17._ICS_95___
CTCTCT__AG__CTGTTT____X_XX_XX_X
18._ICS_95___
CTCTCT__AG__CTGTTT____X_XX_XX_X
19._ICS_95___
CTCTCT__AG__CTGTTT____X_XX_XX_X
20._ICS_95___
CTCTCT__AG__CTGTTT____X_XX_XX_X
21._ICS_95___
CTCTCT__AG__CTGTTT____X_XX_XX_X
22._ICS_95___
CTCTCT__AG__CTGTTT____X_XX_XX_X
23._ICS_95___
CTCTCT__AG__CT__TT____X_XX_XX_X
24._ICS_95___
CTCTCT__AG__CTGTTT____X_XX_XX_X
25._ICS_95___
CTCTCT__AG__CTGTTT____X_XX_XX_X
26._ICS_95___
CT__CT__AG__CTGTTT____X_XX_XX_X
27._ICS_95___
CTCTCT__AG__CTGTTT____X_XX_XX_X
28._ICS_95___
CTCTCT__AG__CTGTTT____X_XX_XX_X
29._ICS_95___
CTCTCT__AG__CT__TT____X_XX_XX_X
30._ICS_95___
CT__CT__AG__CT__TT____X_XX_XX_X
31._ICS_95___
CTCTCT__AG__CTGTTT____X_XX_XX_X
32._ICS_95___
CTCTCT__AG__CTGTTT____X_XX_XX_X
33._ICS_95___
CTCTCT__AG__CTGTTT____X_XX_XX_X
34._ICS_95___
CTCTCTTTAGCTCTGTTTATGGX_XX_XX_X
35._ICS_95___
CTCTCTTTAGCTCTGTTTATGGX_XX_XX_X
36._ICS_95___
CTCTCTTTAGCTCTGTTTATGGX_XX_XX_X
37._ICS_95___
CTCTCTTTAGCTCTGTTTATGGX_XX_XX_X
38._ICS_95___
CTCTCTTTAGCTCTGTTTATGGX_XX_XX_X
39._ICS_95___
CTCTCTTTAGCTCTGTTTATGGX_XX_XX_X
40._ICS_95___
CTCTCTTTAGCTCTGTTTATGGX_XX_XX_X
41._ICS_95___
CTCTCTTTAGCTCTGTTTATGGX_XX_XX_X
42._ICS_95___
CTCTCTTTAGCTCTGTTTATGGX_XX_XX_X
43._ICS_95___
CTCTCTTTAGCTCTGTTTATGGX_XX_XX_X
44._ICS_95___
CTCTCTTTAGCTCTGTTTATGGX_XX_XX_X
45._ICS_95___
CTCTCTTTAGCTCTGTTTATGGX_XX_XX_X
46._ICS_95___
CTCTCTTTAGCTCTGTTTATGGX_XX_XX_X
47._ICS_95___
CTCTCTTTAGCTCTGTTTATGGX_XX_XX_X
48._ICS_95___
CTCTCTTTAGCTCTGTTTATGGX_XX_XX_X
49._ICS_95___
CTCTCTTTAGCTCTGTTTATGGX_XX_XX_X
50._ICS_95___
CTCTCTTTAGCTCTGTTTATGGX_XX_XX_X
51._ICS_95___
CTCTCTTTAGCTCT__TTATGGX_XX_XX_X
52._ICS_95___
CTCTCTTTAGCTCTGTTTATGGX_XX_XX_X
53._ICS_95___
CTCTCT__AGCTCTGTTTATGGX_XX_XX_X
54._ICS_95___
CTCTCTTTAGCTCTGTTTATGGX_XX_XX_X
55._ICS_95___
CTCTCTTTAGCTCTGTTTATGGX_XX_XX_X
56._ICS_95___
CTCTCT__AG__CTGTTT____X_XX_XX_X
57._ICS_95___
CT______AG__CTGT______X_XX_XX_X
58._ICS_95___
__CT__________________X_XX_XX_X
59._ICS_95___
____CT____CT__GT______X_XX_XX_X
60._ICS_95___
____CT____CT__GT______X_XX_XX_X
61._ICS_95___
AGAG__AA____AGAAAAATGGX_XX_XX_X
62._ICS_95___
AGAG__AA____AGAAAAATGGX_XX_XX_X
63._ICS_95___
AGAG__AA____AGAAAAATGGX_XX_XX_X
64._ICS_95___
AGAG__AA____AGAAAAATGGX_XX_XX_X

Input profile: ICS_95 GC-02-2-1-02

 
Mars Center for Cocoa Science, Brazil
Location: Field: 2, Block: 1, Rep: 2, Tree: PL2
Notes: PL2 FP2
 Mars, 2018

1._ICS_95 GC-02-2-1-02

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 2, Block: 1, Rep: 2, Tree: PL3
Notes: PL3 FP1
 Mars, 2018

2._ICS_95 GC-02-2-1-02

identical
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 2, Block: 1, Rep: 2, Tree: PL1
Notes: PL1 FP4
 Mars, 2018

3._ICS_95 GC-02-2-1-02

identical
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 2, Block: 1, Rep: 2, Tree: PL13
Notes: PL13 FP13
 Mars, 2018

4._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1705 2
 Dapeng Zhang, 2016

5._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 13
 Dapeng Zhang, 2016

6._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 11
 Dapeng Zhang, 2016

7._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 9
 Dapeng Zhang, 2016

8._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 5
 Dapeng Zhang, 2016

9._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 3
 Dapeng Zhang, 2016

10._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 1
 Dapeng Zhang, 2016

11._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 14
 Dapeng Zhang, 2016

12._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 10
 Dapeng Zhang, 2016

13._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 5
 Dapeng Zhang, 2016

14._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 1
 Dapeng Zhang, 2016

15._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 2102 2 > FP
 Dapeng Zhang, 2016

16._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 2102 16
 Dapeng Zhang, 2016

17._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 2102 9
 Dapeng Zhang, 2016

18._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1705 6
 Dapeng Zhang, 2016

19._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1705 5
 Dapeng Zhang, 2016

20._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1705 4
 Dapeng Zhang, 2016

21._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1705 3
 Dapeng Zhang, 2016

22._ICS_95

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1705 1
 Dapeng Zhang, 2016

23._ICS_95

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 3
 Dapeng Zhang, 2016

24._ICS_95

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 15
 Dapeng Zhang, 2016

25._ICS_95

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 7
 Dapeng Zhang, 2016

26._ICS_95

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 2102 13 > F
 Dapeng Zhang, 2016

27._ICS_95 RUQ_1144

identical
38 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

28._ICS_95

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 12
 Dapeng Zhang, 2016

29._ICS_95

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 2102 3 > FP
 Dapeng Zhang, 2016

30._ICS_95

identical
35 shared markers

Mars Center for Cocoa Science, Brazil
Location: 2102 1 > FP
 Dapeng Zhang, 2016

31._ICS_95

98.7 %
39 shared markers

Estation Experimental Tropical Pichilingue, Ecuador
 Dapeng Zhang, 2016

32._ICS_95

98.7 %
39 shared markers

Cocoa Research Institute of Ghana (CRIG), Ghana
Location: P26 56
 Dapeng Zhang, 2016

33._ICS_95

98.7 %
39 shared markers

Malaysian Cocoa Board (MCB), Malaysia
Location: Row 10 C0204 2A
 Dapeng Zhang, 2016

34._ICS_95 GC-01-128-7-05

97.9 %
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

35._ICS_95 GC-03-040-4-04

97.9 %
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

36._ICS_95 GC-03-040-4-04

97.9 %
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

37._ICS_95 GC-03-040-4-04

97.9 %
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

38._ICS_95 GC-03-040-4-04

97.9 %
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

39._ICS_95 GC-03-040-4-04

97.9 %
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

40._ICS_95 GC-01-128-7-05

97.9 %
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

41._ICS_95 GC-01-128-7-05

97.9 %
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

42._ICS_95 GC-01-128-7-05

97.9 %
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

43._ICS_95 GC-02-002-1-02

97.9 %
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 16
Notes: 16
 Mars, 2018

44._ICS_95 GC-03-039-4-03

97.9 %
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

45._ICS_95 GC-03-039-4-03

97.9 %
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

46._ICS_95 GC-03-039-4-03

97.9 %
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

47._ICS_95 GC-03-040-4-04

97.9 %
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

48._ICS_95 GC-01-128-7-05

97.8 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

49._ICS_95 GC-01-128-7-05

97.8 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

50._ICS_95 GC-02-002-1-02

97.8 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

51._ICS_95 GC-03-039-4-03

97.8 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

52._ICS_95 GC-03-039-4-03

97.8 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

53._ICS_95 GC-03-039-4-03

97.8 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14
 Mars, 2018

54._ICS_95 GC-03-040-4-04

97.8 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 15
Notes: 15
 Mars, 2018

55._ICS_95 GC-03-039-4-03

97.8 %
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

56._ICS_95

97.4 %
39 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: San Juan Block1
 Dapeng Zhang, 2016

57._ICS_95 RUQ_1144

96.4 %
42 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

58._ICS_95 RUQ_1144

96.2 %
26 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Location: GBR207
 Jocelyn De Wever et al., 2019

59._ICS_95 RUQ_1144B

89.5 %
19 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

60._ICS_95 RUQ_1144

88.9 %
18 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

61._ICS_95 GC-02-002-1-2

51.8 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 2, Block: 1, Rep: 2, Tree: 13 > FP3
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

62._ICS_95 RUQ_1144

51.8 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

63._ICS_95 MITC-000342

51.8 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

64._ICS_95 ICS_95_Fld#_13_Plt#_1

51.8 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 13, Tree: 1
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP860 18TcSNP1062 19TcSNP836 20TcSNP878
21TcSNP929 22TcSNP413 23TcSNP653 24TcSNP1149 25TcSNP174
26TcSNP32 27TcSNP372 28TcSNP448 29TcSNP872 30TcSNP953
31TcSNP1034 32TcSNP1175 33TcSNP1111 34TcSNP577 35TcSNP90
36TcSNP998 37TcSNP150 38TcSNP28 39TcSNP751 40TcSNP1484
41TcSNP602 42TcSNP561 43TcSNP497 44TcSNP894 45TcSNP1063
46TcSNP1126 47TcSNP1270 48TcSNP606 49TcSNP329 50TcSNP689
51TcSNP944 52TcSNP1242 53TcSNP1383 54TcSNP547 55TcSNP776
56TcSNP1309 57TcSNP151 58TcSNP1520 59TcSNP799 60TcSNP899
61TcSNP226 62TcSNP1439 63TcSNP1442 64TcSNP193 65TcSNP25
66TcSNP364 67TcSNP144 68TcSNP230 69TcSNP560 70TcSNP723
71TcSNP731 72TcSNP701 73TcSNP1041 74TcSNP917 75Tcm003s01336581
76Tcm003s07402719 77Tcm001s00947643 78Tcm006s26664133 79Tcm002s20575712 80TcSNP529
81TcSNP1458 82TcSNP60 83TcSNP430 84TcSNP823 85TcSNP619
86TcSNP994 87TcSNP1144 88TcSNP1156 89TcSNP469 90TcSNP999
91TcSNP242 92TcSNP1253 93TcSNP1414 94TcSNP154 95TcSNP240