SNP Profiles of ICS-95   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
AAAACTCCAGAGCTCCCTCTGGCTCCCC
1._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCCC
2._ICS_95___
AAAACTCCAGAGCTCC__CTGGCTCCCC
3._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCCC
4._ICS_95___
AAAACTCC________CTCTGG__CC__
5._ICS_95___
AAAACTCC________CTCTGG__CC__
6._ICS_95___
AAAACTCC________CTCTGG__CC__
7._ICS_95___
AAAACTCC________CTCTGG__CC__
8._ICS_95___
AAAACTCC________CTCTGG__CC__
9._ICS_95___
AAAACTCC________CTCTGG__CC__
10._ICS_95___
AAAACTCC________CTCTGG__CC__
11._ICS_95___
AAAACTCC________CTCTGG__CC__
12._ICS_95___
AAAACTCC________CTCTGG__CC__
13._ICS_95___
AAAACTCC________CTCTGG__CC__
14._ICS_95___
AAAACTCC________CTCTGG__CC__
15._ICS_95___
AAAACTCC________CTCTGG__CC__
16._ICS_95___
AAAACTCC________CTCTGG__CC__
17._ICS_95___
AAAACTCC________CTCTGG__CC__
18._ICS_95___
AAAACTCC________CTCTGG__CC__
19._ICS_95___
AAAACTCC________CTCTGG__CC__
20._ICS_95___
AAAACTCC________CTCTGG__CC__
21._ICS_95___
AAAACTCC________CTCTGG__CC__
22._ICS_95___
AAAACTCC________CTCTGG__CC__
23._ICS_95___
AAAACTCC________CTCTGG__CC__
24._ICS_95___
AAAACTCC________CTCTGG__CC__
25._ICS_95___
AAAACTCC________CTCTGG______
26._ICS_95___
AA__CTCC________CTCTGG__CC__
27._ICS_95___
AAAACTCC________CTCTGG__CC__
28._ICS_95___
AAAACTCC________CTCTGG__CC__
29._ICS_95___
AAAACTCC________CTCTGG__CC__
30._ICS_95___
AAAACTCC__________CTGG__CC__
31._ICS_95___
AAAACTCC________CTCTGG__CC__
32._ICS_95___
AAAACTCC________CTCTGG__CC__
33._ICS_95___
AAAACTCC________CTCTGG__CC__
34._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCCC
35._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCCC
36._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCCC
37._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCCC
38._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCCC
39._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCCC
40._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCCC
41._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCCC
42._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCCC
43._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCCC
44._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCCC
45._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCCC
46._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCCC
47._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCCC
48._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCCC
49._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCCC
50._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCT__CC
51._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCCC
52._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCC__
53._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCCC
54._ICS_95___
AA__CTCCAGAGCTCCCTCTGGCTCCCC
55._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCCC
56._ICS_95___
AAAACTCC________CTCTGG__CC__
57._ICS_95___
____CTCC____CC__CT____CTCC__
58._ICS_95___
______CC________CT______CC__
59._ICS_95___
______CC____CC______________
60._ICS_95___
______CC____CC______________
61._ICS_95___
AAAA__CCAGAG__GGAG__GGAGGGGG
62._ICS_95___
AAAA__CCAGAG__GGAG__GGAGGGGG
63._ICS_95___
AAAA__CCAGAG__GGAG__GGAGGGGG
64._ICS_95___
AAAA__CCAGAG__GGAG__GGAGGGGG
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
ATCCAAAAGGCGGGCTAGTTAGATATCG
1._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
2._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
3._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
4._ICS_95___
______AA____GG________ATAT__
5._ICS_95___
______AA____GG________ATAT__
6._ICS_95___
______AA____GG________ATAT__
7._ICS_95___
______AA____GG________ATAT__
8._ICS_95___
______AA____GG________ATAT__
9._ICS_95___
______AA____GG________ATAT__
10._ICS_95___
______AA____GG________ATAT__
11._ICS_95___
______AA____GG________ATAT__
12._ICS_95___
______AA____GG________ATAT__
13._ICS_95___
______AA____GG________ATAT__
14._ICS_95___
______AA____GG________ATAT__
15._ICS_95___
______AA____GG________ATAT__
16._ICS_95___
______AA____GG________ATAT__
17._ICS_95___
______AA____GG________ATAT__
18._ICS_95___
______AA____GG________ATAT__
19._ICS_95___
______AA____GG________ATAT__
20._ICS_95___
______AA____GG________ATAT__
21._ICS_95___
______AA____GG________ATAT__
22._ICS_95___
______AA____GG________ATAT__
23._ICS_95___
______AA____GG________ATAT__
24._ICS_95___
______AA____GG________ATAT__
25._ICS_95___
______AA____GG________ATAT__
26._ICS_95___
______AA____GG________ATAT__
27._ICS_95___
______AA____GG________ATAT__
28._ICS_95___
______AA____GG________ATAT__
29._ICS_95___
______AA____GG________ATAT__
30._ICS_95___
______AA____GG________ATAT__
31._ICS_95___
______AA____GG________ATAT__
32._ICS_95___
______AA____GG________ATAT__
33._ICS_95___
______AA____GG________ATAT__
34._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
35._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
36._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
37._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
38._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
39._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
40._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
41._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
42._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
43._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
44._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
45._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
46._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
47._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
48._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
49._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
50._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
51._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
52._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
53._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
54._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
55._ICS_95___
ATCCAAAAGGCGGGCTAGTTAGATATCG
56._ICS_95___
______AA____GG________ATAT__
57._ICS_95___
__________CG________AG__ATCG
58._ICS_95___
____AG____CG__CT____AG__ATCG
59._ICS_95___
______AATT__________________
60._ICS_95___
______AATT__________________
61._ICS_95___
ATCCAGAACC__GGAGAAAAAGATATCG
62._ICS_95___
ATCCAGAACC__GGAGAAAAAGATATCG
63._ICS_95___
ATCCAGAACC__GGAGAAAAAGATATCG
64._ICS_95___
ATCCAGAACC__GGAGAAAAAGATATCG
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
CGCTGTGGCCACAAGTGGGTAGCTAACT
1._ICS_95___
CGCTGTGGCCACAAGTGGGTAGCTAACT
2._ICS_95___
CGCTGTGGCCACAAGTGGGTAGCTAACT
3._ICS_95___
CGCTGTGGCCACAAGTGGGTAGCTAACT
4._ICS_95___
CG______CC__AAGT____AG______
5._ICS_95___
CG______CC__AAGT____AG______
6._ICS_95___
CG______CC__AAGT____AG______
7._ICS_95___
CG______CC__AAGT____AG______
8._ICS_95___
CG______CC__AAGT____AG______
9._ICS_95___
CG______CC__AAGT____AG______
10._ICS_95___
CG______CC__AAGT____AG______
11._ICS_95___
CG______CC__AAGT____AG______
12._ICS_95___
CG______CC__AAGT____AG______
13._ICS_95___
CG______CC__AAGT____AG______
14._ICS_95___
CG______CC__AAGT____AG______
15._ICS_95___
CG______CC__AAGT____AG______
16._ICS_95___
CG______CC__AAGT____AG______
17._ICS_95___
CG______CC__AAGT____AG______
18._ICS_95___
CG______CC__AAGT____AG______
19._ICS_95___
CG______CC__AAGT____AG______
20._ICS_95___
CG______CC__AAGT____AG______
21._ICS_95___
CG______CC__AAGT____AG______
22._ICS_95___
CG______CC__AAGT____AG______
23._ICS_95___
CG______CC__AAGT____AG______
24._ICS_95___
CG______CC__AAGT____AG______
25._ICS_95___
CG______CC__AAGT____AG______
26._ICS_95___
CG______CC__AAGT____AG______
27._ICS_95___
CG______CC__AAGT____AG______
28._ICS_95___
CG______CC__AAGT____AG______
29._ICS_95___
CG______CC__AAGT____AG______
30._ICS_95___
CG______CC__AAGT____AG______
31._ICS_95___
CG______CC__AAGT____AG______
32._ICS_95___
CG______CC__AAGT____AG______
33._ICS_95___
CG______CC__AAGT____AG______
34._ICS_95___
CGCTGTGGCCACAAGTGGGTAGCTAA__
35._ICS_95___
CGCTGTGGCCACAAGTGGGTAGCTAA__
36._ICS_95___
CGCTGTGGCCACAAGTGGGTAGCTAA__
37._ICS_95___
CGCTGTGGCCACAAGTGGGTAGCTAA__
38._ICS_95___
CGCTGTGGCCACAAGTGGGTAGCTAA__
39._ICS_95___
CGCTGTGGCCACAAGTGGGTAGCTAA__
40._ICS_95___
CGCTGTGGCCACAAGTGGGTAGCTAA__
41._ICS_95___
CGCTGTGGCCACAAGTGGGTAGCTAA__
42._ICS_95___
CGCTGTGGCCACAAGTGGGTAGCTAA__
43._ICS_95___
CGCTGTGGCCACAAGTGGGTAGCTAA__
44._ICS_95___
CGCTGTGGCCACAAGTGGGTAGCTAA__
45._ICS_95___
CGCTGTGGCCACAAGTGGGTAGCTAA__
46._ICS_95___
CGCTGTGGCCACAAGTGGGTAGCTAA__
47._ICS_95___
CGCTGTGGCCACAAGTGGGTAGCTAA__
48._ICS_95___
CGCTGTGGCCACAAGTGGGTAGCTAA__
49._ICS_95___
CGCTGTGGCCACAAGTGGGTAGCTAA__
50._ICS_95___
CGCTGTGGCCACAAGTGGGTAGCTAA__
51._ICS_95___
CGCTGTGGCCACAAGTGGGTAGCTAA__
52._ICS_95___
CGCTGTGGCCACAAGTGGGTAGCTAA__
53._ICS_95___
CGCTGTGGCCACAAGTGGGTAGCTAA__
54._ICS_95___
CGCTGTGGCCACAAGTGGGTAGCTAA__
55._ICS_95___
CGCTGTGGCCACAAGTGGGTAGCTAA__
56._ICS_95___
CG______CC__AAGT____AG______
57._ICS_95___
CG____GGCCACAAGT____AGCT____
58._ICS_95___
CG____GGCC________GT__CT____
59._ICS_95___
CG______CC____________CT____
60._ICS_95___
CG______CC__AA______________
61._ICS_95___
CGAGACGGCCACAAACCCACAGAGAAAG
62._ICS_95___
CGAGACGGCCACAAACCCACAGAGAAAG
63._ICS_95___
CGAGACGGCCACAAACCCACAGAGAAAG
64._ICS_95___
CGAGACGGCCACAAACCCACAGAGAAAG
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
CCGTATCCAGAGAGCTCCGGGGGTTTCT
1._ICS_95___
CCGTATCCAGAGAGCTCCGGGGGTTTCT
2._ICS_95___
CCGTATCCAGAGAGCTCCGGGGGTTTCT
3._ICS_95___
CCGTATCCAG__AGCTCCGGGGGTTTCT
4._ICS_95___
______CC__________________CT
5._ICS_95___
______CC__________________CT
6._ICS_95___
______CC__________________CT
7._ICS_95___
______CC__________________CT
8._ICS_95___
______CC__________________CT
9._ICS_95___
______CC__________________CT
10._ICS_95___
______CC__________________CT
11._ICS_95___
______CC__________________CT
12._ICS_95___
______CC__________________CT
13._ICS_95___
______CC__________________CT
14._ICS_95___
______CC__________________CT
15._ICS_95___
______CC__________________CT
16._ICS_95___
______CC__________________CT
17._ICS_95___
______CC__________________CT
18._ICS_95___
______CC__________________CT
19._ICS_95___
______CC__________________CT
20._ICS_95___
______CC__________________CT
21._ICS_95___
______CC__________________CT
22._ICS_95___
______CC__________________CT
23._ICS_95___
______CC__________________CT
24._ICS_95___
______CC__________________CT
25._ICS_95___
______CC__________________CT
26._ICS_95___
______CC__________________CT
27._ICS_95___
______CC__________________CT
28._ICS_95___
______CC__________________CT
29._ICS_95___
______CC__________________CT
30._ICS_95___
______CC__________________CT
31._ICS_95___
______CC__________________CT
32._ICS_95___
______CC__________________CT
33._ICS_95___
______CC__________________CT
34._ICS_95___
CCGTATCCAGAGAGCTCCGGGGGTTTCT
35._ICS_95___
CCGTATCCAGAGAGCTCCGGGGGTTTCT
36._ICS_95___
CCGTATCCAGAGAGCTCCGGGGGTTTCT
37._ICS_95___
CCGTATCCAGAGAGCTCCGGGGGTTTCT
38._ICS_95___
CCGTATCCAGAGAGCTCCGGGGGTTTCT
39._ICS_95___
CCGTATCCAGAGAGCTCCGGGGGTTTCT
40._ICS_95___
CCGTATCCAGAGAGCTCCGGGGGTTTCT
41._ICS_95___
CCGTATCCAGAGAGCTCCGGGGGTTTCT
42._ICS_95___
CCGTATCCAGAGAGCTCCGGGGGTTTCT
43._ICS_95___
CCGTATCCAGAGAGCTCCGGGGGTTTCT
44._ICS_95___
CCGTATCCAGAGAGCTCCGGGGGTTTCT
45._ICS_95___
CCGTATCCAGAGAGCTCCGGGGGTTTCT
46._ICS_95___
CCGTATCCAGAGAGCTCCGGGGGTTTCT
47._ICS_95___
CCGTATCCAGAGAGCTCCGGGGGTTTCT
48._ICS_95___
CCGTATCCAGAGAGCTCCGGGGGTTTCT
49._ICS_95___
CCGTATCCAGAGAGCTCCGGGGGTTTCT
50._ICS_95___
CCGTATCCAGAGAGCTCCGGGGGTTTCT
51._ICS_95___
CCGTATCCAGAGAGCTCCGGGGGTTTCT
52._ICS_95___
CCGTATCCAGAGAGCTCCGGGGGTTTCT
53._ICS_95___
CCGTATCCAGAGAGCTCCGGGGGTTTCT
54._ICS_95___
CCGTATCCAGAGAGCTCCGGGGGTTTCT
55._ICS_95___
CCGTATCCAGAGAGCTCCGGGGGTTTCT
56._ICS_95___
______CC__________________CT
57._ICS_95___
__GTAT____AG____________CTCT
58._ICS_95___
____AT__AG________________CT
59._ICS_95___
__________AG________________
60._ICS_95___
____________________________
61._ICS_95___
GGAC__GG__AGAGAG__GGGGACAGAG
62._ICS_95___
GGAC__GG__AGAGAG__GGGGACAGAG
63._ICS_95___
GGAC__GG__AGAGAG__GGGGACAGAG
64._ICS_95___
GGAC__GG__AGAGAG__GGGGACAGAG
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
CTGTAGCGCTTTACGGAAACGGGTTTAG
1._ICS_95___
CTGTAGCGCTTTACGGAAACGGGTTTAG
2._ICS_95___
__GTAGCGCTTTACGGAAACGGGTTTAG
3._ICS_95___
CTGTAGCGCTTTACGGAAACGGGTTTAG
4._ICS_95___
CT____CG__TTACGG__ACGGGTTT__
5._ICS_95___
CT____CG__TTACGG__ACGGGTTT__
6._ICS_95___
CT____CG__TTACGG__ACGGGTTT__
7._ICS_95___
CT____CG__TTACGG__ACGGGTTT__
8._ICS_95___
CT____CG__TTACGG__ACGGGTTT__
9._ICS_95___
CT____CG__TTACGG__ACGGGTTT__
10._ICS_95___
CT____CG__TTACGG__ACGGGTTT__
11._ICS_95___
CT____CG__TTACGG__ACGGGTTT__
12._ICS_95___
CT____CG__TTACGG__ACGGGTTT__
13._ICS_95___
CT____CG__TTACGG__ACGGGTTT__
14._ICS_95___
CT____CG__TTACGG__ACGGGTTT__
15._ICS_95___
CT____CG__TTACGG__ACGGGTTT__
16._ICS_95___
CT____CG__TTACGG__ACGGGTTT__
17._ICS_95___
CT____CG__TTACGG__ACGGGTTT__
18._ICS_95___
CT____CG__TTACGG__ACGGGTTT__
19._ICS_95___
CT____CG__TTACGG__ACGGGTTT__
20._ICS_95___
CT____CG__TTACGG__ACGGGTTT__
21._ICS_95___
CT____CG__TTACGG__ACGGGTTT__
22._ICS_95___
CT____CG__TTACGG__ACGGGTTT__
23._ICS_95___
CT____CG__TTACGG__ACGGGTTT__
24._ICS_95___
CT____CG__TTACGG__ACGGGTTT__
25._ICS_95___
CT____CG__TTACGG__ACGGGTTT__
26._ICS_95___
CT____CG__TTACGG__ACGGGTTT__
27._ICS_95___
CT____CG__TTACGG__ACGGGTTT__
28._ICS_95___
CT____CG__TTACGG__ACGGGTTT__
29._ICS_95___
CT____CG__TTACGG__AC__GT____
30._ICS_95___
______CG__TTACGG__ACGGGTTT__
31._ICS_95___
CT____CG__TTACGG__ACGGGTTT__
32._ICS_95___
CT____CG__TTACGG__ACGGGTTT__
33._ICS_95___
CT____CG__TTACGG__ACGGGTTT__
34._ICS_95___
CTGTAGCGCTTTACGGAAACGGGTTTAG
35._ICS_95___
CTGTAGCGCTTTACGGAAACGGGTTTAG
36._ICS_95___
CTGTAGCGCTTTACGGAAACGGGTTTAG
37._ICS_95___
CTGTAGCGCTTTACGGAAACGGGTTTAG
38._ICS_95___
CTGTAGCGCTTTACGGAAACGGGTTTAG
39._ICS_95___
CTGTAGCGCTTTACGGAAACGGGTTTAG
40._ICS_95___
CTGTAGCGCTTTACGGAAACGGGTTTAG
41._ICS_95___
CTGTAGCGCTTTACGGAAACGGGTTTAG
42._ICS_95___
CTGTAGCGCTTTACGGAAACGGGTTTAG
43._ICS_95___
CTGTAGCGCTTTACGGAAACGGGTTTAG
44._ICS_95___
CTGTAGCGCTTTACGGAAACGGGTTTAG
45._ICS_95___
CTGTAGCGCTTTACGGAAACGGGTTTAG
46._ICS_95___
CTGTAGCGCTTTACGGAAACGGGTTTAG
47._ICS_95___
CTGTAGCGCTTTACGGAAACGGGTTTAG
48._ICS_95___
CTGTAGCGCTTTACGGAAACGGGTTTAG
49._ICS_95___
CTGTAGCGCTTTACGGAAACGGGTTTAG
50._ICS_95___
CTGTAGCGCTTTACGGAAACGGGTTTAG
51._ICS_95___
CTGTAGCGCTTTACGGAAACGGGTTTAG
52._ICS_95___
CTGTAGCGCTTTACGGAAACGGGTTTAG
53._ICS_95___
CTGTAGCGCTTTACGGAAACGGGTTTAG
54._ICS_95___
CTGTAGCGCTTTACGGAAACGGGTTTAG
55._ICS_95___
CTGTAGCGCTTTACGGAAAC__GT__AG
56._ICS_95___
CT____GG__TTACGG__ACGGGTTT__
57._ICS_95___
__GTGGCGCTTTAC__AAACGGGTTTAG
58._ICS_95___
______CGCT__AC__AAACGG______
59._ICS_95___
____AG____________ACGG__TTAG
60._ICS_95___
____AG____________ACGG__TTAG
61._ICS_95___
AGACAGCGAGAAACGGAAACGGACAAAG
62._ICS_95___
AGACAGCGAGAAACGGAAACGGACAAAG
63._ICS_95___
AGACAGCGAGAAACGGAAACGGACAAAG
64._ICS_95___
AGACAGCGAGAAACGGAAACGGACAAAG
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
_Input profile
CCCCTTACAGACAAAGCCCGCTAAACCT
1._ICS_95___
CCCCTTACAGACAAAGCCCGCTAAACCT
2._ICS_95___
CCCCTTACAGACAAAGCCCGCTAAACCT
3._ICS_95___
CCCCTTACAGACAAAGCCCGCTAAACCT
4._ICS_95___
____TT__________CCCG______CT
5._ICS_95___
____TT__________CCCG______CT
6._ICS_95___
____TT__________CCCG______CT
7._ICS_95___
____TT__________CCCG______CT
8._ICS_95___
____TT__________CCCG______CT
9._ICS_95___
____TT__________CCCG______CT
10._ICS_95___
____TT__________CCCG______CT
11._ICS_95___
____TT__________CCCG______CT
12._ICS_95___
____TT__________CCCG______CT
13._ICS_95___
____TT__________CCCG______CT
14._ICS_95___
____TT__________CCCG______CT
15._ICS_95___
____TT__________CCCG______CT
16._ICS_95___
____TT__________CCCG______CT
17._ICS_95___
____TT__________CCCG______CT
18._ICS_95___
____TT__________CCCG______CT
19._ICS_95___
____TT__________CCCG______CT
20._ICS_95___
____TT__________CCCG______CT
21._ICS_95___
____TT__________CCCG______CT
22._ICS_95___
____TT__________CCCG______CT
23._ICS_95___
____TT__________CCCG______CT
24._ICS_95___
____TT__________CCCG______CT
25._ICS_95___
____TT__________CCCG______CT
26._ICS_95___
____TT__________CCCG______CT
27._ICS_95___
____TT__________CCCG______CT
28._ICS_95___
____TT__________CC________CT
29._ICS_95___
____TT__________CCCG______CT
30._ICS_95___
____TT__________CCCG______CT
31._ICS_95___
____TT__________CCGG______CT
32._ICS_95___
____TT__________CCGG______CT
33._ICS_95___
____TT__________CCGG______CT
34._ICS_95___
CCCCTTACAGACAAAGCCCGCTAAACCT
35._ICS_95___
CCCCTTACAGACAAAGCCCGCTAAACCT
36._ICS_95___
CCCCTTACAGACAAAGCCCGCTAAACCT
37._ICS_95___
CCCCTTACAGACAAAGCCCGCTAAACCT
38._ICS_95___
CCCCTTACAGACAAAGCCCGCTAAACCT
39._ICS_95___
CCCCTTACAGACAAAGCCCGCTAAACCT
40._ICS_95___
CCCCTTACAGACAAAGCCCGCTAAACCT
41._ICS_95___
CCCCTTACAGACAAAGCCCGCTAAACCT
42._ICS_95___
CCCCTTACAGACAAAGCCCGCTAAACCT
43._ICS_95___
CCCCTTACAGACAAAGCCCGCTAAACCT
44._ICS_95___
CCCCTTACAGACAAAGCCCGCTAAACCT
45._ICS_95___
CCCCTTACAGACAAAGCCCGCTAAACCT
46._ICS_95___
CCCCTTACAGACAAAGCCCGCTAAACCT
47._ICS_95___
CCCCTTACAGACAAAGCCCGCTAAACCT
48._ICS_95___
CCCCTTACAGACAAAGCCCGCTAAACCT
49._ICS_95___
CCCCTTACAGACAAAGCCCGCTAAACCT
50._ICS_95___
CCCCTTACAGACAAAGCCCGCTAAACCT
51._ICS_95___
CCCCTTACAGACAAAGCCCGCTAA__CT
52._ICS_95___
CCCCTTACAGACAAAGCCCGCTAAACCT
53._ICS_95___
CCCCTTACAGACAAAGCCCGCTAAACCT
54._ICS_95___
CCCCTTACAGACAAAGCCCGCTAAACCT
55._ICS_95___
CC__TTACAGACAAAGCCCGCTAAACCT
56._ICS_95___
____TT__________CCGG______CT
57._ICS_95___
________________CCCG____ACCT
58._ICS_95___
__CC______________CC________
59._ICS_95___
________________ACCG____AC__
60._ICS_95___
________________ACCG____AC__
61._ICS_95___
____AAACAGACAA__CCCCAGAAACAG
62._ICS_95___
____AAACAGACAA__CCCCAGAAACAG
63._ICS_95___
____AAACAGACAA__CCCCAGAAACAG
64._ICS_95___
____AAACAGACAA__CCCCAGAAACAG
 85 86 87 88 89 90 91 92 93      
_Input profile
CTCTTTAGCTCTTTCCCCX_XX_XX_XX_XX_X
1._ICS_95___
CTCTTTAGCTCTTTCCCCX_XX_XX_XX_XX_X
2._ICS_95___
__CTTTAGCTCTTTCCCCX_XX_XX_XX_XX_X
3._ICS_95___
__CTTTAGCTCTTT____X_XX_XX_XX_XX_X
4._ICS_95___
CTCT__AG__CTTT____X_XX_XX_XX_XX_X
5._ICS_95___
CTCT__AG__CTTT____X_XX_XX_XX_XX_X
6._ICS_95___
CTCT__AG__CTTT____X_XX_XX_XX_XX_X
7._ICS_95___
CTCT__AG__CTTT____X_XX_XX_XX_XX_X
8._ICS_95___
CTCT__AG__CTTT____X_XX_XX_XX_XX_X
9._ICS_95___
CTCT__AG__CTTT____X_XX_XX_XX_XX_X
10._ICS_95___
CTCT__AG__CTTT____X_XX_XX_XX_XX_X
11._ICS_95___
CTCT__AG__CTTT____X_XX_XX_XX_XX_X
12._ICS_95___
CTCT__AG__CTTT____X_XX_XX_XX_XX_X
13._ICS_95___
CTCT__AG__CTTT____X_XX_XX_XX_XX_X
14._ICS_95___
CTCT__AG__CTTT____X_XX_XX_XX_XX_X
15._ICS_95___
CTCT__AG__CTTT____X_XX_XX_XX_XX_X
16._ICS_95___
CTCT__AG__CTTT____X_XX_XX_XX_XX_X
17._ICS_95___
CTCT__AG__CTTT____X_XX_XX_XX_XX_X
18._ICS_95___
CTCT__AG__CTTT____X_XX_XX_XX_XX_X
19._ICS_95___
CTCT__AG__CTTT____X_XX_XX_XX_XX_X
20._ICS_95___
CTCT__AG__CTTT____X_XX_XX_XX_XX_X
21._ICS_95___
CTCT__AG__CTTT____X_XX_XX_XX_XX_X
22._ICS_95___
CTCT__AG__CTTT____X_XX_XX_XX_XX_X
23._ICS_95___
CTCT__AG__CTTT____X_XX_XX_XX_XX_X
24._ICS_95___
CTCT__AG__CTTT____X_XX_XX_XX_XX_X
25._ICS_95___
CTCT__AG__CTTT____X_XX_XX_XX_XX_X
26._ICS_95___
CTCT__AG__CTTT____X_XX_XX_XX_XX_X
27._ICS_95___
__CT__AG__CTTT____X_XX_XX_XX_XX_X
28._ICS_95___
CTCT__AG__CTTT____X_XX_XX_XX_XX_X
29._ICS_95___
CTCT__AG__CTTT____X_XX_XX_XX_XX_X
30._ICS_95___
__CT__AG__CTTT____X_XX_XX_XX_XX_X
31._ICS_95___
CTCT__AG__CTTT____X_XX_XX_XX_XX_X
32._ICS_95___
CTCT__AG__CTTT____X_XX_XX_XX_XX_X
33._ICS_95___
CTCT__AG__CTTT____X_XX_XX_XX_XX_X
34._ICS_95___
CTCTTTAGCTCTTTATGGX_XX_XX_XX_XX_X
35._ICS_95___
CTCTTTAGCTCTTTATGGX_XX_XX_XX_XX_X
36._ICS_95___
CTCTTTAGCTCTTTATGGX_XX_XX_XX_XX_X
37._ICS_95___
CTCTTTAGCTCTTTATGGX_XX_XX_XX_XX_X
38._ICS_95___
CTCTTTAGCTCTTTATGGX_XX_XX_XX_XX_X
39._ICS_95___
CTCTTTAGCTCTTTATGGX_XX_XX_XX_XX_X
40._ICS_95___
CTCTTTAGCTCTTTATGGX_XX_XX_XX_XX_X
41._ICS_95___
CTCTTTAGCTCTTTATGGX_XX_XX_XX_XX_X
42._ICS_95___
CTCTTTAGCTCTTTATGGX_XX_XX_XX_XX_X
43._ICS_95___
CTCTTTAGCTCTTTATGGX_XX_XX_XX_XX_X
44._ICS_95___
CTCTTTAGCTCTTTATGGX_XX_XX_XX_XX_X
45._ICS_95___
CTCTTTAGCTCTTTATGGX_XX_XX_XX_XX_X
46._ICS_95___
CTCTTTAGCTCTTTATGGX_XX_XX_XX_XX_X
47._ICS_95___
CTCTTTAGCTCTTTATGGX_XX_XX_XX_XX_X
48._ICS_95___
CTCTTTAGCTCTTTATGGX_XX_XX_XX_XX_X
49._ICS_95___
CTCTTTAGCTCTTTATGGX_XX_XX_XX_XX_X
50._ICS_95___
CTCTTTAGCTCTTTATGGX_XX_XX_XX_XX_X
51._ICS_95___
CTCTTTAGCTCTTTATGGX_XX_XX_XX_XX_X
52._ICS_95___
CTCTTTAGCTCTTTATGGX_XX_XX_XX_XX_X
53._ICS_95___
CTCT__AGCTCTTTATGGX_XX_XX_XX_XX_X
54._ICS_95___
CTCTTTAGCTCTTTATGGX_XX_XX_XX_XX_X
55._ICS_95___
CTCTTTAGCTCTTTATGGX_XX_XX_XX_XX_X
56._ICS_95___
CTCT__AG__CTTT____X_XX_XX_XX_XX_X
57._ICS_95___
______AG__CT______X_XX_XX_XX_XX_X
58._ICS_95___
CT________________X_XX_XX_XX_XX_X
59._ICS_95___
__CT____CT________X_XX_XX_XX_XX_X
60._ICS_95___
__CT____CT________X_XX_XX_XX_XX_X
61._ICS_95___
AG__AA____AGAAATGGX_XX_XX_XX_XX_X
62._ICS_95___
AG__AA____AGAAATGGX_XX_XX_XX_XX_X
63._ICS_95___
AG__AA____AGAAATGGX_XX_XX_XX_XX_X
64._ICS_95___
AG__AA____AGAAATGGX_XX_XX_XX_XX_X

Input profile: ICS_95 GC-02-2-1-02

 
Mars Center for Cocoa Science, Brazil
Location: Field: 2, Block: 1, Rep: 2, Tree: PL3
Notes: PL3 FP1
 Mars, 2018

1._ICS_95 GC-02-2-1-02

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 2, Block: 1, Rep: 2, Tree: PL2
Notes: PL2 FP2
 Mars, 2018

2._ICS_95 GC-02-2-1-02

identical
90 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 2, Block: 1, Rep: 2, Tree: PL1
Notes: PL1 FP4
 Mars, 2018

3._ICS_95 GC-02-2-1-02

identical
89 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 2, Block: 1, Rep: 2, Tree: PL13
Notes: PL13 FP13
 Mars, 2018

4._ICS_95

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1705 2
 Dapeng Zhang, 2016

5._ICS_95

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 3
 Dapeng Zhang, 2016

6._ICS_95

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 13
 Dapeng Zhang, 2016

7._ICS_95

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 11
 Dapeng Zhang, 2016

8._ICS_95

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 9
 Dapeng Zhang, 2016

9._ICS_95

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 5
 Dapeng Zhang, 2016

10._ICS_95

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 3
 Dapeng Zhang, 2016

11._ICS_95

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 1
 Dapeng Zhang, 2016

12._ICS_95

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 14
 Dapeng Zhang, 2016

13._ICS_95

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 10
 Dapeng Zhang, 2016

14._ICS_95

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 7
 Dapeng Zhang, 2016

15._ICS_95

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 5
 Dapeng Zhang, 2016

16._ICS_95

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 1
 Dapeng Zhang, 2016

17._ICS_95

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 2102 3 > FP
 Dapeng Zhang, 2016

18._ICS_95

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 2102 2 > FP
 Dapeng Zhang, 2016

19._ICS_95

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 2102 16
 Dapeng Zhang, 2016

20._ICS_95

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 2102 9
 Dapeng Zhang, 2016

21._ICS_95

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1705 6
 Dapeng Zhang, 2016

22._ICS_95

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1705 5
 Dapeng Zhang, 2016

23._ICS_95

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1705 4
 Dapeng Zhang, 2016

24._ICS_95

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1705 3
 Dapeng Zhang, 2016

25._ICS_95

identical
36 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1705 1
 Dapeng Zhang, 2016

26._ICS_95

identical
36 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 15
 Dapeng Zhang, 2016

27._ICS_95

identical
36 shared markers

Mars Center for Cocoa Science, Brazil
Location: 2102 13 > F
 Dapeng Zhang, 2016

28._ICS_95 RUQ_1144

identical
36 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

29._ICS_95

identical
35 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 12
 Dapeng Zhang, 2016

30._ICS_95

identical
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: 2102 1 > FP
 Dapeng Zhang, 2016

31._ICS_95

98.6 %
37 shared markers

Estation Experimental Tropical Pichilingue, Ecuador
 Dapeng Zhang, 2016

32._ICS_95

98.6 %
37 shared markers

Cocoa Research Institute of Ghana (CRIG), Ghana
Location: P26 56
 Dapeng Zhang, 2016

33._ICS_95

98.6 %
37 shared markers

Malaysian Cocoa Board (MCB), Malaysia
Location: Row 10 C0204 2A
 Dapeng Zhang, 2016

34._ICS_95 GC-01-128-7-05

97.8 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

35._ICS_95 GC-03-040-4-04

97.8 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

36._ICS_95 GC-03-040-4-04

97.8 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

37._ICS_95 GC-03-040-4-04

97.8 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

38._ICS_95 GC-03-040-4-04

97.8 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

39._ICS_95 GC-03-040-4-04

97.8 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

40._ICS_95 GC-01-128-7-05

97.8 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

41._ICS_95 GC-01-128-7-05

97.8 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

42._ICS_95 GC-01-128-7-05

97.8 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

43._ICS_95 GC-02-002-1-02

97.8 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 16
Notes: 16
 Mars, 2018

44._ICS_95 GC-03-039-4-03

97.8 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

45._ICS_95 GC-03-039-4-03

97.8 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

46._ICS_95 GC-03-039-4-03

97.8 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

47._ICS_95 GC-03-039-4-03

97.8 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

48._ICS_95 GC-03-039-4-03

97.8 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

49._ICS_95 GC-03-040-4-04

97.8 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

50._ICS_95 GC-01-128-7-05

97.8 %
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

51._ICS_95 GC-01-128-7-05

97.8 %
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

52._ICS_95 GC-02-002-1-02

97.8 %
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

53._ICS_95 GC-03-039-4-03

97.8 %
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14
 Mars, 2018

54._ICS_95 GC-03-040-4-04

97.8 %
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 15
Notes: 15
 Mars, 2018

55._ICS_95 GC-03-039-4-03

97.8 %
89 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

56._ICS_95

97.3 %
37 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: San Juan Block1
 Dapeng Zhang, 2016

57._ICS_95 RUQ_1144

96.3 %
41 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

58._ICS_95 RUQ_1144

96.2 %
26 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Location: GBR207
 Jocelyn De Wever et al., 2019

59._ICS_95 RUQ_1144B

88.9 %
18 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

60._ICS_95 RUQ_1144

88.2 %
17 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

61._ICS_95 GC-02-002-1-2

51.9 %
80 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 2, Block: 1, Rep: 2, Tree: 13 > FP3
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

62._ICS_95 RUQ_1144

51.9 %
80 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

63._ICS_95 MITC-000342

51.9 %
80 shared markers

USDA-SHRS, United States of America
 Mars, 2018

64._ICS_95 ICS_95_Fld#_13_Plt#_1

51.9 %
80 shared markers

USDA-TARS, United States of America
Location: Field: 13, Tree: 1
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP860 18TcSNP1062 19TcSNP836 20TcSNP878
21TcSNP929 22TcSNP413 23TcSNP653 24TcSNP1149 25TcSNP174
26TcSNP32 27TcSNP372 28TcSNP448 29TcSNP872 30TcSNP1034
31TcSNP1175 32TcSNP1111 33TcSNP577 34TcSNP90 35TcSNP998
36TcSNP150 37TcSNP28 38TcSNP751 39TcSNP1484 40TcSNP602
41TcSNP561 42TcSNP497 43TcSNP894 44TcSNP1063 45TcSNP1126
46TcSNP1270 47TcSNP606 48TcSNP329 49TcSNP689 50TcSNP944
51TcSNP1242 52TcSNP1383 53TcSNP547 54TcSNP776 55TcSNP1309
56TcSNP151 57TcSNP1520 58TcSNP799 59TcSNP899 60TcSNP226
61TcSNP1439 62TcSNP1442 63TcSNP193 64TcSNP25 65TcSNP364
66TcSNP144 67TcSNP230 68TcSNP560 69TcSNP723 70TcSNP731
71TcSNP701 72TcSNP1041 73TcSNP917 74Tcm003s01336581 75Tcm003s07402719
76Tcm001s00947643 77Tcm006s26664133 78Tcm002s20575712 79TcSNP529 80TcSNP1458
81TcSNP60 82TcSNP430 83TcSNP823 84TcSNP619 85TcSNP994
86TcSNP1144 87TcSNP1156 88TcSNP469 89TcSNP999 90TcSNP242
91TcSNP1414 92TcSNP154 93TcSNP240