SNP Profiles of CATONGO   View Data

 Show/Hide Profiles

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
AAAATTCCGGGGCCCCCCCCGGTTCCCC
1._SIC_628___
AAAATTCCGGGGCCCCCCCCGGTTCCCC
2._SIC_628___
AAAATTCCGGGGCCCCCCCCGGTTCCCC
3._SIC_628___
AAAATTCCGGGGCCCCCCCCGGTTCCCC
4._SIC_628___
AAAA__CCGGGG__GGGG__GGAAGGGG
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
AACCAAGGCCGGAATTGGTTAACCGGAA
1._SIC_628___
AACCAAGGCCGGAATTGGTTAACCGGAA
2._SIC_628___
AACCAAGGCCGGAATTGGTTAACCGGAA
3._SIC_628___
AACCAAGGCCGGAATTGGTTAACCGGAA
4._SIC_628___
TTCCAACC__GGGGAAGGTTAAGGCCAA
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
TTGGAACCCCGGTTGGTTAATTAATTCC
1._SIC_628___
TTGGAACCCCGGTTGGTTAATTAATTCC
2._SIC_628___
TTGGAACCCCGGTTGGTTAATTAATTCC
3._SIC_628___
TTGGAACCCCGGTTGG__AATTAATTCC
4._SIC_628___
AACCAACCCCGGAA__AAAAAAAAAAGG
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
GGTTCCAAGGAACCCCGGGGTTTTCCTT
1._SIC_628___
GGTTCCAAGGAACCCCGGGGTTTTCCTT
2._SIC_628___
GGTTCCAAGGAACCCCGGGGTTTTCCTT
3._SIC_628___
GGTTCCAAGGAACCCCGGGGTTTTCCTT
4._SIC_628___
CC__GG__GGAAGG__GGGGAAAAGGAA
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
TTAACCTTCCAAGGGGAAAATTGGGGTT
1._SIC_628___
TTAACCTTCCAAGGGGAAAATTGGGGTT
2._SIC_628___
TTAACCTTCCAAGGGGAAAATTGGGGTT
3._SIC_628___
TTAACCTTCCAAGGGGAAAATTGGGGTT
4._SIC_628___
AAAAGGAAGGAAGGGGAAAAAACCGG__
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
_Input profile
CCGGCCAACCAAAACCGGCCTTTTTTTT
1._SIC_628___
CCGGCCAACCAAAACCGGCCTTTTTTTT
2._SIC_628___
CCGGCCAACCAAAACCGGCCTTTTTTTT
3._SIC_628___
CCGGCCAACCAAAACCGGCCTTTTTTTT
4._SIC_628___
____CCAACCAA__CCCCGGTTAAAAAA
 85 86 87 88           
_Input profile
AATTTTTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
1._SIC_628___
AATTTTTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
2._SIC_628___
AATTTTTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
3._SIC_628___
AA__TTTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
4._SIC_628___
____AAAAX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X

Input profile: SIC_628 GC-06-15-1-15

 
Mars Center for Cocoa Science, Brazil
Location: Field: 6, Block: 1, Rep: 15, Tree: PL6
Notes: PL6 FP4
 Mars, 2018

1._SIC_628 GC-06-15-1-15

identical
88 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 6, Block: 1, Rep: 15, Tree: PL2
Notes: PL2 FP3
 Mars, 2018

2._SIC_628 GC-06-15-1-15

identical
88 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 6, Block: 1, Rep: 15, Tree: PL5
Notes: PL5 FP2
 Mars, 2018

3._SIC_628 GC-06-15-1-15

identical
86 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 6, Block: 1, Rep: 15, Tree: PL1
Notes: PL1 FP1
 Mars, 2018

4._SIC_628 GC-06-15-1-15

48.6 %
74 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 6, Block: 1, Rep: 15, Tree: 1 > FP1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP1062 18TcSNP836 19TcSNP878 20TcSNP929
21TcSNP653 22TcSNP1149 23TcSNP174 24TcSNP32 25TcSNP372
26TcSNP448 27TcSNP872 28TcSNP953 29TcSNP1034 30TcSNP1175
31TcSNP1111 32TcSNP577 33TcSNP90 34TcSNP998 35TcSNP150
36TcSNP28 37TcSNP751 38TcSNP1484 39TcSNP602 40TcSNP561
41TcSNP497 42TcSNP894 43TcSNP1063 44TcSNP1126 45TcSNP1270
46TcSNP606 47TcSNP329 48TcSNP689 49TcSNP944 50TcSNP1242
51TcSNP1383 52TcSNP547 53TcSNP776 54TcSNP1309 55TcSNP151
56TcSNP1520 57TcSNP799 58TcSNP899 59TcSNP226 60TcSNP1439
61TcSNP1442 62TcSNP193 63TcSNP25 64TcSNP364 65TcSNP144
66TcSNP230 67TcSNP560 68TcSNP723 69TcSNP731 70TcSNP701
71TcSNP1041 72TcSNP645 73Tcm003s01336581 74Tcm003s07402719 75Tcm001s00947643
76Tcm006s26664133 77Tcm002s20575712 78TcSNP529 79TcSNP1458 80TcSNP60
81TcSNP430 82TcSNP619 83TcSNP994 84TcSNP1156 85TcSNP469
86TcSNP999 87TcSNP1253 88TcSNP1414