SNP Profiles of SPEC 41 /6-18   View Data

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 Key

 1234567891011121314
_Input profile
ATCTGGGGGGTTGGTTAAGGCCCTGGCC
1._RUQ_1325
AATT__GG______TTAA__CC__AACC
2._RUQ_1325
____GG________TT____________
3._RUQ_1325
____CC______________________
 1516171819202122232425262728
_Input profile
AACTCTAGCCAGGGTTAAACTTTTGGGG
1._RUQ_1325
AA____GG____GGTT____TTTTGGGG
2._RUQ_1325
____TTGG__AAGG____AA____GGGG
3._RUQ_1325
____________CC______________
 2930313233343536373839404142
_Input profile
CTCGAACCGGCCTTCCAACGAGACCTAA
1._RUQ_1325
TT__AACCAA__CCAAATCG__CCTT__
2._RUQ_1325
TT__________CCAA__CC__CC____
3._RUQ_1325
____________CCAA__CC________
 4344454647484950515253545556
_Input profile
CCAAGGAACTAAGGGGCCACTTGTGGCC
1._RUQ_1325
CC__GGAA__AA__GGCCCC__TTGGCC
2._RUQ_1325
____GG____AA______CC________
3._RUQ_1325
__________AA______CC________
 575859           
_Input profile
CCCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
1._RUQ_1325
__CCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
2._RUQ_1325
______X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
3._RUQ_1325
______X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X

Input profile: PA_156_[PER] RUQ_1531

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

1._SPEC_41_/6-18 RUQ_1325

77.6 %
38 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

2._SPEC_41_/6-18 RUQ_1325

64.7 %
17 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

3._SPEC_41_/6-18 RUQ_1325

28.6 %
7 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Location: GBR207
 Jocelyn De Wever et al., 2019

 


  Key to SNP Markers

1TcSNP1527 2TcSNP1524 3TcSNP1458 4TcSNP1404 5TcSNP1401
6TcSNP1293 7TcSNP1275 8TcSNP1253 9TcSNP1230 10TcSNP1205
11TcSNP1144 12TcSNP1112 13TcSNP1062 14TcSNP1053 15TcSNP1019
16TcSNP1010 17TcSNP999 18TcSNP998 19TcSNP945 20TcSNP899
21TcSNP872 22TcSNP836 23TcSNP835 24TcSNP823 25TcSNP800
26TcSNP739 27TcSNP731 28TcSNP723 29TcSNP702 30TcSNP660
31TcSNP645 32TcSNP644 33TcSNP642 34TcSNP640 35TcSNP602
36TcSNP591 37TcSNP589 38TcSNP577 39TcSNP546 40TcSNP529
41TcSNP522 42TcSNP519 43TcSNP421 44TcSNP363 45TcSNP329
46TcSNP305 47TcSNP290 48TcSNP230 49TcSNP194 50TcSNP189
51TcSNP176 52TcSNP144 53TcSNP143 54TcSNP131 55TcSNP52
56TcSNP49 57TcSNP33 58TcSNP19 59TcSNP13