| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
_Input profile | AA | CT | CC | AA | AA | AT | GG | GG | AA | GG | CC | CT | GG | CC |
1._RUQ_234 | AA | CT | CC | AA | AA | __ | GG | GG | AA | GG | CC | CT | GG | CC |
2._SCA_6 | __ | __ | CC | __ | __ | __ | __ | GG | __ | __ | CC | __ | GG | __ |
3._RUQ_234 | __ | __ | CC | __ | __ | __ | __ | GG | __ | __ | CC | __ | GG | __ |
4._SCA_6 | __ | __ | CC | __ | __ | __ | __ | GG | __ | __ | CC | __ | GG | __ |
5._SCA_6 | __ | __ | CC | __ | __ | __ | __ | GG | __ | __ | CC | __ | GG | __ |
6._SCA_6 | __ | __ | CC | __ | __ | __ | __ | GG | __ | __ | CC | __ | GG | __ |
7._SCA_6 | __ | __ | CC | __ | __ | __ | __ | GG | __ | __ | CC | __ | GG | __ |
8._SCA_6 | __ | __ | CC | __ | __ | __ | __ | GG | __ | __ | CC | __ | GG | __ |
9._GC-01-026-2-03 | __ | __ | CC | __ | __ | __ | __ | GG | __ | __ | CC | __ | GG | __ |
10._RUQ_234 | __ | __ | CC | __ | __ | __ | __ | GG | __ | __ | __ | __ | __ | __ |
11._SCA_6 | __ | __ | CC | __ | __ | __ | __ | GG | __ | __ | CC | __ | GG | __ |
12._SCA_6 | __ | __ | CC | __ | __ | __ | __ | GG | __ | __ | CC | __ | GG | __ |
13._SCA_6 | __ | __ | CC | __ | __ | __ | __ | GG | __ | __ | CC | __ | GG | __ |
14._SCA_6 | __ | __ | CC | __ | __ | __ | __ | GG | __ | __ | CC | __ | GG | __ |
15._SCA_6 | __ | __ | CC | __ | __ | __ | __ | GG | __ | __ | CC | __ | GG | __ |
16._SCA_6 | __ | __ | CC | __ | __ | __ | __ | GG | __ | __ | CC | __ | GG | __ |
17._SCA_6 | __ | __ | CC | __ | __ | __ | __ | GG | __ | __ | CC | __ | GG | __ |
18._SCA_6 | __ | __ | CC | __ | __ | __ | __ | GG | __ | __ | CC | __ | GG | __ |
19._SCA_6 | __ | __ | CC | __ | __ | __ | __ | GG | __ | __ | CC | __ | GG | __ |
20._SCA_6 | __ | __ | CC | __ | __ | __ | __ | GG | __ | __ | CC | __ | GG | __ |
21._SCA_6 | __ | __ | CC | __ | __ | __ | __ | GG | __ | __ | CC | __ | GG | __ |
22._SCA_6 | __ | __ | CC | __ | __ | __ | __ | GG | __ | __ | CC | __ | GG | __ |
23._SCA_6 | __ | __ | CC | __ | __ | __ | __ | GG | __ | __ | CC | __ | GG | __ |
24._SCA_6 | __ | __ | CC | __ | __ | __ | __ | GG | __ | __ | CC | __ | GG | __ |
25._SCA_6 | __ | __ | CC | __ | __ | __ | __ | GG | __ | __ | CC | __ | GG | __ |
26._SCA_6 | __ | __ | CC | __ | __ | __ | __ | GG | __ | __ | CC | __ | GG | __ |
27._SCA_6 | __ | __ | CC | __ | __ | __ | __ | GG | __ | __ | CC | __ | GG | __ |
28._GC-01-26-2-03 | __ | __ | CC | __ | __ | __ | __ | GG | __ | __ | CC | __ | GG | __ |
29._GC-01-026-2-03 | __ | __ | CC | __ | __ | __ | __ | GG | __ | __ | CC | __ | GG | __ |
30._GC-01-026-2-03 | __ | __ | CC | __ | __ | __ | __ | GG | __ | __ | CC | __ | GG | __ |
31._GC-01-026-2-03 | __ | __ | CC | __ | __ | __ | __ | GG | __ | __ | CC | __ | GG | __ |
32._GC-01-026-2-03 | __ | __ | CC | __ | __ | __ | __ | GG | __ | __ | CC | __ | GG | __ |
33._GC-01-026-2-03 | __ | __ | CC | __ | __ | __ | __ | GG | __ | __ | CC | __ | GG | __ |
34._GC-01-026-2-03 | __ | __ | CC | __ | __ | __ | __ | GG | __ | __ | CC | __ | GG | __ |
35._GC-01-026-2-03 | __ | __ | CC | __ | __ | __ | __ | GG | __ | __ | CC | __ | GG | __ |
36._GC-01-026-2-03 | __ | __ | CC | __ | __ | __ | __ | GG | __ | __ | CC | __ | GG | __ |
37._GC-01-026-2-03 | __ | __ | CC | __ | __ | __ | __ | GG | __ | __ | CC | __ | GG | __ |
38._GC-01-026-2-03 | __ | __ | CC | __ | __ | __ | __ | GG | __ | __ | CC | __ | GG | __ |
39._GC-01-026-2-03 | __ | __ | CC | __ | __ | __ | __ | GG | __ | __ | CC | __ | GG | __ |
40._GC-01-26-2-03 | __ | __ | CC | __ | __ | __ | __ | GG | __ | __ | CC | __ | GG | __ |
41._GC-01-26-2-03 | __ | __ | CC | __ | __ | __ | __ | GG | __ | __ | CC | __ | GG | __ |
42._GC-01-26-2-03 | __ | __ | CC | __ | __ | __ | __ | GG | __ | __ | CC | __ | GG | __ |
43._GC-01-026-2-03 | __ | __ | CC | __ | __ | __ | __ | GG | __ | __ | CC | __ | GG | __ |
44._RUQ_234 | __ | __ | GG | __ | __ | __ | __ | CC | __ | __ | __ | __ | GG | __ |
45._MITC-000343 | __ | __ | GG | __ | __ | __ | __ | CC | __ | __ | __ | __ | GG | __ |
46._MITC-000344 | __ | __ | GG | __ | __ | __ | __ | CC | __ | __ | __ | __ | GG | __ |
47._MITC-000345 | __ | __ | GG | __ | __ | __ | __ | CC | __ | __ | __ | __ | GG | __ |
48._MITC-000347 | __ | __ | GG | __ | __ | __ | __ | CC | __ | __ | __ | __ | GG | __ |
49._MITC-000348 | __ | __ | GG | __ | __ | __ | __ | CC | __ | __ | __ | __ | GG | __ |
50._MITC-000349 | __ | __ | GG | __ | __ | __ | __ | CC | __ | __ | __ | __ | GG | __ |
51._MITC-000376 | __ | __ | GG | __ | __ | __ | __ | CC | __ | __ | __ | __ | GG | __ |
52._MITC-000452 | __ | __ | GG | __ | __ | __ | __ | CC | __ | __ | __ | __ | GG | __ |
53._SCA6 | __ | __ | GG | __ | __ | __ | __ | __ | __ | __ | __ | __ | __ | __ |
54._SCA_6_TC_(Penn_State)_Fld#_197_Plt#_6 | __ | __ | CG | __ | __ | __ | __ | AC | __ | __ | __ | __ | AG | __ |
55._SCA_6_Fld#_16_Plt#_1 | __ | __ | CG | __ | __ | __ | __ | AC | __ | __ | __ | __ | AG | __ |
| 15 | 16 | 17 | 18 | 19 | 20 | 21 | 22 | 23 | 24 | 25 | 26 | 27 | 28 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
_Input profile | AA | TT | CC | AA | GG | GG | CC | CC | TT | CC | TT | CC | AA | GG |
1._RUQ_234 | AA | TT | CC | AA | GG | GG | CC | CC | TT | CC | TT | CC | AA | GG |
2._SCA_6 | __ | __ | __ | AA | __ | __ | CC | __ | __ | __ | __ | __ | __ | GG |
3._RUQ_234 | __ | __ | __ | AA | __ | __ | CC | __ | __ | __ | __ | __ | __ | GG |
4._SCA_6 | __ | __ | __ | AA | __ | __ | CC | __ | __ | __ | __ | __ | __ | GG |
5._SCA_6 | __ | __ | __ | AA | __ | __ | CC | __ | __ | __ | __ | __ | __ | GG |
6._SCA_6 | __ | __ | __ | AA | __ | __ | CC | __ | __ | __ | __ | __ | __ | GG |
7._SCA_6 | __ | __ | __ | AA | __ | __ | CC | __ | __ | __ | __ | __ | __ | GG |
8._SCA_6 | __ | __ | __ | AA | __ | __ | CC | __ | __ | __ | __ | __ | __ | GG |
9._GC-01-026-2-03 | __ | __ | CC | AA | __ | GG | CC | CC | __ | CC | __ | __ | AA | GG |
10._RUQ_234 | __ | __ | CC | AA | __ | __ | CC | __ | __ | CC | __ | __ | AA | GG |
11._SCA_6 | __ | __ | __ | AA | __ | __ | CC | __ | __ | __ | __ | __ | __ | GG |
12._SCA_6 | __ | __ | __ | AA | __ | __ | CC | __ | __ | __ | __ | __ | __ | GG |
13._SCA_6 | __ | __ | __ | AA | __ | __ | CC | __ | __ | __ | __ | __ | __ | GG |
14._SCA_6 | __ | __ | __ | AA | __ | __ | CC | __ | __ | __ | __ | __ | __ | GG |
15._SCA_6 | __ | __ | __ | AA | __ | __ | CC | __ | __ | __ | __ | __ | __ | GG |
16._SCA_6 | __ | __ | __ | AA | __ | __ | CC | __ | __ | __ | __ | __ | __ | GG |
17._SCA_6 | __ | __ | __ | AA | __ | __ | CC | __ | __ | __ | __ | __ | __ | GG |
18._SCA_6 | __ | __ | __ | AA | __ | __ | CC | __ | __ | __ | __ | __ | __ | GG |
19._SCA_6 | __ | __ | __ | AA | __ | __ | CC | __ | __ | __ | __ | __ | __ | GG |
20._SCA_6 | __ | __ | __ | AA | __ | __ | CC | __ | __ | __ | __ | __ | __ | GG |
21._SCA_6 | __ | __ | __ | AA | __ | __ | CC | __ | __ | __ | __ | __ | __ | GG |
22._SCA_6 | __ | __ | __ | AA | __ | __ | CC | __ | __ | __ | __ | __ | __ | GG |
23._SCA_6 | __ | __ | __ | AA | __ | __ | CC | __ | __ | __ | __ | __ | __ | GG |
24._SCA_6 | __ | __ | __ | AA | __ | __ | CC | __ | __ | __ | __ | __ | __ | GG |
25._SCA_6 | __ | __ | __ | AA | __ | __ | CC | __ | __ | __ | __ | __ | __ | GG |
26._SCA_6 | __ | __ | __ | AA | __ | __ | CC | __ | __ | __ | __ | __ | __ | GG |
27._SCA_6 | __ | __ | __ | AA | __ | __ | CC | __ | __ | __ | __ | __ | __ | GG |
28._GC-01-26-2-03 | __ | __ | CC | AA | __ | GG | CC | CC | __ | CC | __ | __ | AA | GG |
29._GC-01-026-2-03 | __ | __ | CC | AA | __ | GG | CC | CC | __ | CC | __ | __ | AA | GG |
30._GC-01-026-2-03 | __ | __ | CC | AA | __ | GG | CC | CC | __ | CC | __ | __ | AA | GG |
31._GC-01-026-2-03 | __ | __ | CC | AA | __ | GG | CC | CC | __ | CC | __ | __ | AA | GG |
32._GC-01-026-2-03 | __ | __ | CC | AA | __ | GG | CC | CC | __ | CC | __ | __ | AA | GG |
33._GC-01-026-2-03 | __ | __ | CC | AA | __ | GG | CC | CC | __ | CC | __ | __ | AA | GG |
34._GC-01-026-2-03 | __ | __ | CC | AA | __ | GG | CC | CC | __ | CC | __ | __ | AA | GG |
35._GC-01-026-2-03 | __ | __ | CC | AA | __ | GG | CC | CC | __ | CC | __ | __ | AA | GG |
36._GC-01-026-2-03 | __ | __ | CC | AA | __ | GG | CC | CC | __ | CC | __ | __ | AA | GG |
37._GC-01-026-2-03 | __ | __ | CC | AA | __ | GG | CC | CC | __ | CC | __ | __ | AA | GG |
38._GC-01-026-2-03 | __ | __ | CC | AA | __ | GG | CC | CC | __ | CC | __ | __ | AA | GG |
39._GC-01-026-2-03 | __ | __ | CC | AA | __ | GG | CC | CC | __ | CC | __ | __ | AA | GG |
40._GC-01-26-2-03 | __ | __ | CC | AA | __ | GG | CC | CC | __ | CC | __ | __ | AA | GG |
41._GC-01-26-2-03 | __ | __ | CC | AA | __ | GG | CC | CC | __ | CC | __ | __ | AA | GG |
42._GC-01-26-2-03 | __ | __ | CC | AA | __ | GG | CC | CC | __ | CC | __ | __ | AA | GG |
43._GC-01-026-2-03 | __ | __ | CC | AA | __ | GG | CC | CC | __ | CC | __ | __ | AA | GG |
44._RUQ_234 | __ | __ | __ | AA | __ | GG | GG | GG | __ | CC | __ | __ | AA | CC |
45._MITC-000343 | __ | __ | __ | AA | __ | GG | GG | GG | __ | CC | __ | __ | AA | CC |
46._MITC-000344 | __ | __ | __ | AA | __ | GG | GG | GG | __ | CC | __ | __ | AA | CC |
47._MITC-000345 | __ | __ | __ | AA | __ | GG | GG | GG | __ | CC | __ | __ | AA | CC |
48._MITC-000347 | __ | __ | __ | AA | __ | GG | GG | GG | __ | CC | __ | __ | AA | CC |
49._MITC-000348 | __ | __ | __ | AA | __ | GG | GG | GG | __ | CC | __ | __ | AA | CC |
50._MITC-000349 | __ | __ | __ | AA | __ | GG | GG | GG | __ | CC | __ | __ | AA | CC |
51._MITC-000376 | __ | __ | __ | AA | __ | GG | GG | GG | __ | CC | __ | __ | AA | CC |
52._MITC-000452 | __ | __ | __ | AA | __ | GG | GG | GG | __ | CC | __ | __ | AA | CC |
53._SCA6 | __ | __ | __ | __ | __ | __ | GG | __ | __ | __ | __ | __ | __ | __ |
54._SCA_6_TC_(Penn_State)_Fld#_197_Plt#_6 | __ | __ | __ | AG | __ | AG | CG | CG | __ | AC | __ | __ | AG | CC |
55._SCA_6_Fld#_16_Plt#_1 | __ | __ | __ | AG | __ | AG | CG | CG | __ | AC | __ | __ | AG | CC |
| 29 | 30 | 31 | 32 | 33 | 34 | 35 | 36 | 37 | 38 | 39 | 40 | 41 | 42 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
_Input profile | CT | CC | AG | CC | GG | TT | CC | CC | AA | CG | AG | AA | CC | AA |
1._RUQ_234 | CT | CC | AG | CC | GG | TT | CC | CC | AA | CG | AG | AA | CC | AA |
2._SCA_6 | __ | __ | AG | __ | __ | __ | __ | CC | __ | CG | __ | AA | __ | __ |
3._RUQ_234 | __ | __ | AG | __ | __ | __ | __ | CC | __ | CG | __ | AA | __ | __ |
4._SCA_6 | __ | __ | AG | __ | __ | __ | __ | CC | __ | CG | __ | AA | __ | __ |
5._SCA_6 | __ | __ | AG | __ | __ | __ | __ | CC | __ | CG | __ | AA | __ | __ |
6._SCA_6 | __ | __ | AG | __ | __ | __ | __ | CC | __ | CG | __ | AA | __ | __ |
7._SCA_6 | __ | __ | AG | __ | __ | __ | __ | CC | __ | CG | __ | AA | __ | __ |
8._SCA_6 | __ | __ | AG | __ | __ | __ | __ | CC | __ | CG | __ | AA | __ | __ |
9._GC-01-026-2-03 | __ | __ | AA | __ | __ | __ | CC | CC | __ | CG | __ | AA | __ | __ |
10._RUQ_234 | CT | __ | __ | __ | __ | __ | CC | CC | __ | CG | __ | AA | __ | __ |
11._SCA_6 | __ | __ | AA | __ | __ | __ | __ | CC | __ | CG | __ | AA | __ | __ |
12._SCA_6 | __ | __ | AA | __ | __ | __ | __ | CC | __ | CG | __ | AA | __ | __ |
13._SCA_6 | __ | __ | AA | __ | __ | __ | __ | CC | __ | CG | __ | AA | __ | __ |
14._SCA_6 | __ | __ | AA | __ | __ | __ | __ | CC | __ | CG | __ | AA | __ | __ |
15._SCA_6 | __ | __ | AA | __ | __ | __ | __ | CC | __ | CG | __ | AA | __ | __ |
16._SCA_6 | __ | __ | AA | __ | __ | __ | __ | CC | __ | CG | __ | AA | __ | __ |
17._SCA_6 | __ | __ | AA | __ | __ | __ | __ | CC | __ | CG | __ | AA | __ | __ |
18._SCA_6 | __ | __ | AA | __ | __ | __ | __ | CC | __ | CG | __ | AA | __ | __ |
19._SCA_6 | __ | __ | AA | __ | __ | __ | __ | CC | __ | CG | __ | AA | __ | __ |
20._SCA_6 | __ | __ | AA | __ | __ | __ | __ | CC | __ | CG | __ | AA | __ | __ |
21._SCA_6 | __ | __ | AA | __ | __ | __ | __ | CC | __ | CG | __ | AA | __ | __ |
22._SCA_6 | __ | __ | AA | __ | __ | __ | __ | CC | __ | CG | __ | AA | __ | __ |
23._SCA_6 | __ | __ | AA | __ | __ | __ | __ | CC | __ | CG | __ | AA | __ | __ |
24._SCA_6 | __ | __ | AA | __ | __ | __ | __ | CC | __ | CG | __ | AA | __ | __ |
25._SCA_6 | __ | __ | AA | __ | __ | __ | __ | CC | __ | CG | __ | AA | __ | __ |
26._SCA_6 | __ | __ | AA | __ | __ | __ | __ | CC | __ | CG | __ | AA | __ | __ |
27._SCA_6 | __ | __ | AA | __ | __ | __ | __ | CC | __ | CG | __ | AA | __ | __ |
28._GC-01-26-2-03 | TT | __ | AA | __ | __ | __ | CC | CC | __ | CG | __ | AA | __ | __ |
29._GC-01-026-2-03 | TT | __ | AA | __ | __ | __ | CC | CC | __ | CG | __ | AA | __ | __ |
30._GC-01-026-2-03 | TT | __ | AA | __ | __ | __ | CC | CC | __ | CG | __ | AA | __ | __ |
31._GC-01-026-2-03 | TT | __ | AA | __ | __ | __ | CC | CC | __ | CG | __ | AA | __ | __ |
32._GC-01-026-2-03 | TT | __ | AA | __ | __ | __ | CC | CC | __ | CG | __ | AA | __ | __ |
33._GC-01-026-2-03 | TT | __ | AA | __ | __ | __ | CC | CC | __ | CG | __ | AA | __ | __ |
34._GC-01-026-2-03 | TT | __ | AA | __ | __ | __ | CC | CC | __ | CG | __ | AA | __ | __ |
35._GC-01-026-2-03 | TT | __ | AA | __ | __ | __ | CC | CC | __ | CG | __ | AA | __ | __ |
36._GC-01-026-2-03 | TT | __ | AA | __ | __ | __ | CC | CC | __ | CG | __ | AA | __ | __ |
37._GC-01-026-2-03 | TT | __ | AA | __ | __ | __ | CC | CC | __ | CG | __ | AA | __ | __ |
38._GC-01-026-2-03 | TT | __ | AA | __ | __ | __ | CC | CC | __ | CG | __ | AA | __ | __ |
39._GC-01-026-2-03 | TT | __ | AA | __ | __ | __ | CC | CC | __ | CG | __ | AA | __ | __ |
40._GC-01-26-2-03 | TT | __ | AA | __ | __ | __ | CC | CC | __ | CG | __ | AA | __ | __ |
41._GC-01-26-2-03 | TT | __ | AA | __ | __ | __ | CC | CC | __ | CG | __ | AA | __ | __ |
42._GC-01-26-2-03 | TT | __ | AA | __ | __ | __ | CC | CC | __ | CG | __ | AA | __ | __ |
43._GC-01-026-2-03 | TT | __ | AA | __ | __ | __ | CC | CC | __ | CG | __ | AA | __ | __ |
44._RUQ_234 | __ | __ | __ | __ | __ | __ | GG | CC | __ | CG | __ | AA | __ | __ |
45._MITC-000343 | __ | __ | __ | __ | __ | __ | GG | CC | __ | CG | __ | AA | __ | __ |
46._MITC-000344 | __ | __ | __ | __ | __ | __ | GG | CC | __ | CG | __ | AA | __ | __ |
47._MITC-000345 | __ | __ | __ | __ | __ | __ | GG | CC | __ | CG | __ | AA | __ | __ |
48._MITC-000347 | __ | __ | __ | __ | __ | __ | GG | CC | __ | CG | __ | AA | __ | __ |
49._MITC-000348 | __ | __ | __ | __ | __ | __ | GG | CC | __ | CG | __ | AA | __ | __ |
50._MITC-000349 | __ | __ | __ | __ | __ | __ | GG | CC | __ | CG | __ | AA | __ | __ |
51._MITC-000376 | __ | __ | __ | __ | __ | __ | GG | CC | __ | CG | __ | AA | __ | __ |
52._MITC-000452 | __ | __ | __ | __ | __ | __ | GG | CC | __ | CG | __ | AA | __ | __ |
53._SCA6 | __ | __ | __ | __ | __ | __ | CC | CC | __ | CG | __ | __ | __ | __ |
54._SCA_6_TC_(Penn_State)_Fld#_197_Plt#_6 | __ | __ | __ | __ | __ | __ | AG | AC | __ | CG | __ | AC | __ | __ |
55._SCA_6_Fld#_16_Plt#_1 | __ | __ | __ | __ | __ | __ | AG | AC | __ | CG | __ | AC | __ | __ |
| 43 | 44 | 45 | 46 | 47 | 48 | 49 | 50 | 51 | 52 | 53 | 54 | 55 | 56 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
_Input profile | CT | AA | AA | AA | TT | AA | GG | AA | TT | AC | AA | TT | TT | CC |
1._RUQ_234 | CT | AA | AA | AA | TT | AA | GG | AA | TT | AC | AA | TT | TT | CC |
2._SCA_6 | __ | __ | __ | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
3._RUQ_234 | __ | __ | __ | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
4._SCA_6 | __ | __ | __ | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
5._SCA_6 | __ | __ | __ | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
6._SCA_6 | __ | __ | __ | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
7._SCA_6 | __ | __ | __ | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
8._SCA_6 | __ | __ | __ | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
9._GC-01-026-2-03 | __ | __ | AA | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
10._RUQ_234 | __ | __ | AA | __ | __ | AA | __ | __ | __ | CC | __ | __ | __ | __ |
11._SCA_6 | __ | __ | __ | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
12._SCA_6 | __ | __ | __ | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
13._SCA_6 | __ | __ | __ | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
14._SCA_6 | __ | __ | __ | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
15._SCA_6 | __ | __ | __ | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
16._SCA_6 | __ | __ | __ | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
17._SCA_6 | __ | __ | __ | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
18._SCA_6 | __ | __ | __ | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
19._SCA_6 | __ | __ | __ | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
20._SCA_6 | __ | __ | __ | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
21._SCA_6 | __ | __ | __ | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
22._SCA_6 | __ | __ | __ | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
23._SCA_6 | __ | __ | __ | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
24._SCA_6 | __ | __ | __ | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
25._SCA_6 | __ | __ | __ | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
26._SCA_6 | __ | __ | __ | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
27._SCA_6 | __ | __ | __ | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
28._GC-01-26-2-03 | __ | __ | AA | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
29._GC-01-026-2-03 | __ | __ | AA | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
30._GC-01-026-2-03 | __ | __ | AA | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
31._GC-01-026-2-03 | __ | __ | AA | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
32._GC-01-026-2-03 | __ | __ | AA | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
33._GC-01-026-2-03 | __ | __ | AA | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
34._GC-01-026-2-03 | __ | __ | AA | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
35._GC-01-026-2-03 | __ | __ | AA | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
36._GC-01-026-2-03 | __ | __ | AA | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
37._GC-01-026-2-03 | __ | __ | AA | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
38._GC-01-026-2-03 | __ | __ | AA | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
39._GC-01-026-2-03 | __ | __ | AA | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
40._GC-01-26-2-03 | __ | __ | AA | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
41._GC-01-26-2-03 | __ | __ | AA | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
42._GC-01-26-2-03 | __ | __ | __ | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
43._GC-01-026-2-03 | __ | __ | GG | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
44._RUQ_234 | __ | __ | AA | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
45._MITC-000343 | __ | __ | AA | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
46._MITC-000344 | __ | __ | AA | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
47._MITC-000345 | __ | __ | AA | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
48._MITC-000347 | __ | __ | AA | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
49._MITC-000348 | __ | __ | AA | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
50._MITC-000349 | __ | __ | AA | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
51._MITC-000376 | __ | __ | AA | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
52._MITC-000452 | __ | __ | AA | __ | __ | AA | __ | __ | __ | AC | __ | __ | __ | __ |
53._SCA6 | __ | __ | __ | __ | __ | AA | __ | __ | __ | CC | __ | __ | __ | __ |
54._SCA_6_TC_(Penn_State)_Fld#_197_Plt#_6 | __ | __ | AG | __ | __ | AA | __ | __ | __ | AA | __ | __ | __ | __ |
55._SCA_6_Fld#_16_Plt#_1 | __ | __ | AG | __ | __ | AA | __ | __ | __ | AA | __ | __ | __ | __ |
| 57 | 58 | 59 | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
_Input profile | TT | AA | CC | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
1._RUQ_234 | TT | AA | CC | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
2._SCA_6 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
3._RUQ_234 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
4._SCA_6 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
5._SCA_6 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
6._SCA_6 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
7._SCA_6 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
8._SCA_6 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
9._GC-01-026-2-03 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
10._RUQ_234 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
11._SCA_6 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
12._SCA_6 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
13._SCA_6 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
14._SCA_6 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
15._SCA_6 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
16._SCA_6 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
17._SCA_6 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
18._SCA_6 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
19._SCA_6 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
20._SCA_6 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
21._SCA_6 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
22._SCA_6 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
23._SCA_6 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
24._SCA_6 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
25._SCA_6 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
26._SCA_6 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
27._SCA_6 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
28._GC-01-26-2-03 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
29._GC-01-026-2-03 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
30._GC-01-026-2-03 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
31._GC-01-026-2-03 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
32._GC-01-026-2-03 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
33._GC-01-026-2-03 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
34._GC-01-026-2-03 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
35._GC-01-026-2-03 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
36._GC-01-026-2-03 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
37._GC-01-026-2-03 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
38._GC-01-026-2-03 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
39._GC-01-026-2-03 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
40._GC-01-26-2-03 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
41._GC-01-26-2-03 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
42._GC-01-26-2-03 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
43._GC-01-026-2-03 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
44._RUQ_234 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
45._MITC-000343 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
46._MITC-000344 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
47._MITC-000345 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
48._MITC-000347 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
49._MITC-000348 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
50._MITC-000349 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
51._MITC-000376 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
52._MITC-000452 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
53._SCA6 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
54._SCA_6_TC_(Penn_State)_Fld#_197_Plt#_6 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
55._SCA_6_Fld#_16_Plt#_1 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
| 1 | TcSNP1527 | 2 | TcSNP1524 | 3 | TcSNP1458 | 4 | TcSNP1404 | 5 | TcSNP1401 |
| 6 | TcSNP1293 | 7 | TcSNP1275 | 8 | TcSNP1253 | 9 | TcSNP1230 | 10 | TcSNP1205 |
| 11 | TcSNP1144 | 12 | TcSNP1112 | 13 | TcSNP1062 | 14 | TcSNP1053 | 15 | TcSNP1019 |
| 16 | TcSNP1010 | 17 | TcSNP999 | 18 | TcSNP998 | 19 | TcSNP945 | 20 | TcSNP899 |
| 21 | TcSNP872 | 22 | TcSNP836 | 23 | TcSNP835 | 24 | TcSNP823 | 25 | TcSNP800 |
| 26 | TcSNP739 | 27 | TcSNP731 | 28 | TcSNP723 | 29 | TcSNP702 | 30 | TcSNP660 |
| 31 | TcSNP645 | 32 | TcSNP644 | 33 | TcSNP642 | 34 | TcSNP640 | 35 | TcSNP602 |
| 36 | TcSNP591 | 37 | TcSNP589 | 38 | TcSNP577 | 39 | TcSNP546 | 40 | TcSNP529 |
| 41 | TcSNP522 | 42 | TcSNP519 | 43 | TcSNP421 | 44 | TcSNP363 | 45 | TcSNP329 |
| 46 | TcSNP305 | 47 | TcSNP290 | 48 | TcSNP230 | 49 | TcSNP194 | 50 | TcSNP189 |
| 51 | TcSNP176 | 52 | TcSNP144 | 53 | TcSNP143 | 54 | TcSNP131 | 55 | TcSNP52 |
| 56 | TcSNP49 | 57 | TcSNP33 | 58 | TcSNP19 | 59 | TcSNP13 |