SNP Profiles of CERRO AZUL 10 View Data

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_Input profile	TT	TT	GG	GG	TT	TT	AA	TT	TT	TT	AA	CT	AA	CC
1._RUQ_936	__	__	__	__	__	TT	__	__	__	__	__	__	__	__
2._GC-05-077-2-28	__	__	__	__	__	TT	__	__	TT	__	AA	__	__	__
3._GC-05-077-2-28	__	__	__	__	__	TT	__	__	TT	__	AA	__	__	__
4._GC-05-077-2-28	__	__	__	__	__	TT	__	__	TT	__	AA	__	__	__
5._GC-05-077-2-28	__	__	__	__	__	TT	__	__	TT	__	AA	__	__	__
6._GC-05-077-2-28	__	__	__	__	__	TT	__	__	TT	__	AA	__	__	__
7._GC-05-77-2-28	__	__	__	__	__	AA	__	__	__	__	AA	__	__	__
8._RUQ_936	__	__	__	__	__	AA	__	__	__	__	AA	__	__	__
9._RUQ_936	__	__	__	__	__	TT	__	__	__	__	__	__	__	__

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_Input profile	TT	AA	CC	AG	TT	AA	TT	TT	GG	GT	TT	GG	AA	CC
1._RUQ_936	TT	AA	__	GG	__	__	__	__	GG	GT	TT	__	__	__
2._GC-05-077-2-28	TT	AA	__	AG	GG	__	__	__	GG	GT	CC	__	GG	__
3._GC-05-077-2-28	TT	AA	__	AG	GG	__	__	__	GG	GT	CC	__	GG	__
4._GC-05-077-2-28	TT	AA	__	AG	GG	__	__	__	GG	GT	CC	__	GG	__
5._GC-05-077-2-28	TT	AA	__	AG	GG	__	__	__	GG	GT	CC	__	GG	__
6._GC-05-077-2-28	TT	AA	__	AG	GG	__	__	__	GG	GT	CC	__	GG	__
7._GC-05-77-2-28	__	AA	__	AG	CC	__	__	__	GG	AC	__	__	__	__
8._RUQ_936	__	AA	__	AG	CC	__	__	__	GG	AC	__	__	__	__
9._RUQ_936	CC	AA	__	__	__	__	__	__	GG	GG	TT	__	__	__

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_Input profile	AA	TT	CC	TT	CG	GG	CC	CT	CC	CT	GG	AA	TT	AG
1._RUQ_936	__	__	CC	__	CG	__	CC	__	__	__	GG	__	__	AG
2._GC-05-077-2-28	__	__	CC	__	CG	__	CC	__	__	__	GG	__	__	AG
3._GC-05-077-2-28	__	__	CC	__	CG	__	CC	__	__	__	GG	__	__	AG
4._GC-05-077-2-28	__	__	CC	__	CG	__	CC	__	__	__	GG	__	__	AG
5._GC-05-077-2-28	__	__	CC	__	CG	__	CC	__	__	__	GG	__	__	AG
6._GC-05-077-2-28	__	__	CC	__	CG	__	CC	__	__	__	GG	__	__	AG
7._GC-05-77-2-28	__	__	CC	__	CG	__	CC	__	__	__	GG	__	__	AG
8._RUQ_936	__	__	CC	__	CG	__	CC	__	__	__	GG	__	__	AG
9._RUQ_936	__	__	AA	__	GG	__	CC	__	__	__	AG	__	__	AG

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_Input profile	TT	GG	CC	CC	TT	TT	CC	CC	CC	TT	X_X	X_X	X_X	X_X
1._RUQ_936	__	__	__	CC	__	__	__	__	__	__	X_X	X_X	X_X	X_X
2._GC-05-077-2-28	__	__	__	CC	__	__	__	__	__	__	X_X	X_X	X_X	X_X
3._GC-05-077-2-28	__	__	__	CC	__	__	__	__	__	__	X_X	X_X	X_X	X_X
4._GC-05-077-2-28	__	__	__	CC	__	__	__	__	__	__	X_X	X_X	X_X	X_X
5._GC-05-077-2-28	__	__	__	CC	__	__	__	__	__	__	X_X	X_X	X_X	X_X
6._GC-05-077-2-28	__	__	__	CC	__	__	__	__	__	__	X_X	X_X	X_X	X_X
7._GC-05-77-2-28	__	__	__	CC	__	__	__	__	__	__	X_X	X_X	X_X	X_X
8._RUQ_936	__	__	__	CC	__	__	__	__	__	__	X_X	X_X	X_X	X_X
9._RUQ_936	__	__	__	AC	__	__	__	__	__	__	X_X	X_X	X_X	X_X

Input profile: CERRO_AZUL_10 RUQ_936

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

View Data

Ame
0.972

1._CERRO_AZUL_10 RUQ_936

96.2 %
13 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

2._CERRO_AZUL_10 GC-05-077-2-28

82.4 %
17 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1 > FP1

Mars, 2018

3._CERRO_AZUL_10 GC-05-077-2-28

82.4 %
17 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2 > FP2

Mars, 2018

4._CERRO_AZUL_10 GC-05-077-2-28

82.4 %
17 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3 > FP3

Mars, 2018

5._CERRO_AZUL_10 GC-05-077-2-28

82.4 %
17 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4 > FP4

Mars, 2018

6._CERRO_AZUL_10 GC-05-077-2-28

82.4 %
17 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 5

Notes: 5

Mars, 2018

7._CERRO_AZUL_10 GC-05-77-2-28

76.9 %
13 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Field: 5, Block: 2, Rep: 28, Tree: 5

Notes: MCCS_Structure_refs_above_0.9membership

Mars, 2018

8._CERRO_AZUL_10 RUQ_936

76.9 %
13 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

Mars, 2018

9._CERRO_AZUL_10 RUQ_936

66.7 %
12 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

Key to SNP Markers

1	TcSNP1527	2	TcSNP1524	3	TcSNP1404	4	TcSNP1401	5	TcSNP1293
6	TcSNP1253	7	TcSNP1230	8	TcSNP1205	9	TcSNP1144	10	TcSNP1112
11	TcSNP1062	12	TcSNP1053	13	TcSNP1019	14	TcSNP1010	15	TcSNP999
16	TcSNP998	17	TcSNP945	18	TcSNP899	19	TcSNP836	20	TcSNP835
21	TcSNP800	22	TcSNP739	23	TcSNP731	24	TcSNP723	25	TcSNP702
26	TcSNP660	27	TcSNP645	28	TcSNP644	29	TcSNP642	30	TcSNP640
31	TcSNP591	32	TcSNP589	33	TcSNP577	34	TcSNP546	35	TcSNP529
36	TcSNP522	37	TcSNP519	38	TcSNP421	39	TcSNP329	40	TcSNP305
41	TcSNP290	42	TcSNP230	43	TcSNP194	44	TcSNP189	45	TcSNP176
46	TcSNP144	47	TcSNP143	48	TcSNP131	49	TcSNP49	50	TcSNP33
51	TcSNP19	52	TcSNP13

SNP Profiles of CERRO AZUL 10 View Data

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Input profile: CERRO_AZUL_10 RUQ_936

1._CERRO_AZUL_10 RUQ_936

96.2 % 13 shared markers

2._CERRO_AZUL_10 GC-05-077-2-28

82.4 % 17 shared markers

3._CERRO_AZUL_10 GC-05-077-2-28

82.4 % 17 shared markers

4._CERRO_AZUL_10 GC-05-077-2-28

82.4 % 17 shared markers

5._CERRO_AZUL_10 GC-05-077-2-28

82.4 % 17 shared markers

6._CERRO_AZUL_10 GC-05-077-2-28

82.4 % 17 shared markers

7._CERRO_AZUL_10 GC-05-77-2-28

76.9 % 13 shared markers

8._CERRO_AZUL_10 RUQ_936

76.9 % 13 shared markers

9._CERRO_AZUL_10 RUQ_936

66.7 % 12 shared markers

96.2 %
13 shared markers

82.4 %
17 shared markers

82.4 %
17 shared markers

82.4 %
17 shared markers

82.4 %
17 shared markers

82.4 %
17 shared markers

76.9 %
13 shared markers

76.9 %
13 shared markers

66.7 %
12 shared markers