SNP Profiles of GU 207/H   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
AATTGGGGAATTGGTTTTAATTCCTTGG
1._RUQ_225
____GG________TT____________
2._RUQ_225
____GG________TT______CC__GG
3._GU_207_/H
____GG________TT______TT__AA
4._GU_207_/H
____GG________TT______TT__AA
5._GU_207_/H
____GG________TT______TT__AA
6._GU_207_/H
____GG________TT______TT__AA
7._GU_207_/H
____GG________TT______TT__AA
8._GU_207_/H
____GG________TT______TT__AA
9._GU_207_/H
____GG________TT______TT__AA
10._GU_207_/H
____GG________TT______TT__AA
11._GU_207_/H
____GG________TT______TT__AA
12._GU_207_/H
____GG________TT______TT__AA
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
CCAACCCCGGCCGGGGCCAAAATTTTAA
1._RUQ_225
______CCGG____GG____AA____AA
2._RUQ_225
________GG____GG____________
3._GU_207_/H
________GG____GG____________
4._GU_207_/H
________GG____GG____________
5._GU_207_/H
________GG____GG____________
6._GU_207_/H
________GG____GG____________
7._GU_207_/H
________GG____GG____________
8._GU_207_/H
________GG____GG____________
9._GU_207_/H
________GG____GG____________
10._GU_207_/H
________GG____GG____________
11._GU_207_/H
________GG____GG____________
12._GU_207_/H
________GG____GG____________
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
GGCCCCAACCAGTTCCCCTTCCAAAACC
1._RUQ_225
GGCC__________CCCC__CC__AA__
2._RUQ_225
GG____AA________CC__CC__AA__
3._GU_207_/H
GG____GG________AA__CC__CC__
4._GU_207_/H
GG____GG________AA__CC__CC__
5._GU_207_/H
GG____GG________AA__CC__CC__
6._GU_207_/H
GG____GG________AA__CC__CC__
7._GU_207_/H
GG____GG________AA__CC__CC__
8._GU_207_/H
GG____GG________AA__CC__CC__
9._GU_207_/H
GG____GG________AA__CC__CC__
10._GU_207_/H
GG____GG________AA__CC__CC__
11._GU_207_/H
GG____GG________AA__CC__CC__
12._GU_207_/H
GG____GG________AA__CC__CC__
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
ACCCAAGGAACCGGGGGGCCAAAATTGG
1._RUQ_225
______GG____GG______AA______
2._RUQ_225
____________GG______AA______
3._GU_207_/H
____________AA______________
4._GU_207_/H
____________AA______CC______
5._GU_207_/H
____________AA______CC______
6._GU_207_/H
____________AA______CC______
7._GU_207_/H
____________AA______CC______
8._GU_207_/H
____________AA______CC______
9._GU_207_/H
____________AA______CC______
10._GU_207_/H
____________AA______CC______
11._GU_207_/H
____________AA______CC______
12._GU_207_/H
____________AA______CC______
 57 58 59 60           
_Input profile
CCTTCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
1._RUQ_225
________X_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
2._RUQ_225
________X_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
3._GU_207_/H
________X_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
4._GU_207_/H
________X_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
5._GU_207_/H
________X_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
6._GU_207_/H
________X_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
7._GU_207_/H
________X_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
8._GU_207_/H
________X_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
9._GU_207_/H
________X_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
10._GU_207_/H
________X_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
11._GU_207_/H
________X_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
12._GU_207_/H
________X_XX_XX_XX_XX_XX_XX_XX_XX_XX_X

Input profile: GU_207_/H RUQ_225

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

1._GU_207_/H RUQ_225

identical
16 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

2._GU_207_/H RUQ_225

identical
13 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

3._GU_207_/H

50 %
12 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 13
 Dapeng Zhang, 2016

4._GU_207_/H

46.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 6 > FP
 Dapeng Zhang, 2016

5._GU_207_/H

46.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 12 > F
 Dapeng Zhang, 2016

6._GU_207_/H

46.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 1 > FP
 Dapeng Zhang, 2016

7._GU_207_/H

46.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 11
 Dapeng Zhang, 2016

8._GU_207_/H

46.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 10
 Dapeng Zhang, 2016

9._GU_207_/H

46.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 9
 Dapeng Zhang, 2016

10._GU_207_/H

46.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 7
 Dapeng Zhang, 2016

11._GU_207_/H

46.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 4
 Dapeng Zhang, 2016

12._GU_207_/H

46.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 2
 Dapeng Zhang, 2016

 


  Key to SNP Markers

1TcSNP1527 2TcSNP1524 3TcSNP1458 4TcSNP1404 5TcSNP1401
6TcSNP1293 7TcSNP1275 8TcSNP1253 9TcSNP1237 10TcSNP1230
11TcSNP1205 12TcSNP1144 13TcSNP1112 14TcSNP1062 15TcSNP1053
16TcSNP1019 17TcSNP1010 18TcSNP999 19TcSNP998 20TcSNP945
21TcSNP899 22TcSNP872 23TcSNP836 24TcSNP835 25TcSNP823
26TcSNP800 27TcSNP739 28TcSNP731 29TcSNP723 30TcSNP702
31TcSNP660 32TcSNP645 33TcSNP644 34TcSNP642 35TcSNP640
36TcSNP602 37TcSNP591 38TcSNP589 39TcSNP577 40TcSNP546
41TcSNP529 42TcSNP522 43TcSNP519 44TcSNP421 45TcSNP363
46TcSNP329 47TcSNP305 48TcSNP290 49TcSNP230 50TcSNP194
51TcSNP189 52TcSNP176 53TcSNP144 54TcSNP143 55TcSNP131
56TcSNP52 57TcSNP49 58TcSNP33 59TcSNP19 60TcSNP13