SNP Profiles of GU 310 /P   View Data

 Show/Hide Profiles

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
CCACAGCCAAGGGGCCAAGGGGAAGGAA
1._GU_175___
CCACAGAAAAGGAACCAAGGGGAAAACC
2._GU_175___
CCACAGCCTTCCGGGGAACCGGTTCCTT
3._GU_175___
CCACAGCCTTCCGGGGAACCGGTTCCTT
4._GU_175___
CCACAGCCTTCCGGGGAACCGGTTCCTT
5._GU_175___
CCACAGCCTTCCGGGGAACCGGTTCCTT
6._GU_175___
CCACAGCCTTCCGGGGAACCGGTTCCTT
7._GU_175___
CCACAGCCTTCCGGGGAACCGGTTCCTT
8._GU_175___
CCACAGCCTTCCGGGGAACCGGTTCCTT
9._GU_175___
CCACAGCCTTCCGGGGAACCGGTTCCTT
10._GU_175___
CCACAGCCTTCCGGGGAACCGGTTCCTT
11._GU_175___
CCACAGCCTTCCGGGGAACCGGTTCCTT
12._GU_175___
CC__AGCCTTCCGGGGAACCGGTTCCTT
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
AAAAAAAAGGAAGGAAGGCCGGAAAAGG
1._GU_175___
AAAAGGAGAGAAAACCGGCCAAACGGAA
2._GU_175___
TTTTTTTTGGTTCCAACCGGGGTTTTCC
3._GU_175___
TTTTTTTTGGTTCCAACCGGGGTTTTCC
4._GU_175___
TTTTTTTTGGTTCCAACCGGGGTTTTCC
5._GU_175___
TTTTTTTTGGTTCCAACCGGGGTTTTCC
6._GU_175___
TTTTTTTTGGTTCCAACCGGGGTTTTCC
7._GU_175___
TTTTTTTTGGTTCCAACCGGGGTTTTCC
8._GU_175___
TTTTTTTTGGTTCCAACCGGGGTTTTCC
9._GU_175___
TTTTTTTTGGTTCCAACCGGGGTTTTCC
10._GU_175___
TTTTTTTTGGTTCCAACCGGGGTTTTCC
11._GU_175___
TTTTTTTTGGTTCCAACCGGGGTTTTCC
12._GU_175___
TTTTTTTTGGTTCCAACCGGGGTTTTCC
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
TTGGAAGGGGGGGGGGTTTTGGGGAAAA
1._GU_175___
TTAGAACGAGGGGGGGATTTGGAGATAA
2._GU_175___
AAGGAACCGGGGCCGGAATTGGGGAATT
3._GU_175___
AAGGAACCGGGGCCGGAATTGGGGAATT
4._GU_175___
AAGGAACCGGGGCCGGAATTGGGGAATT
5._GU_175___
AAGGAACCGGGGCCGGAATTGGGGAATT
6._GU_175___
AAGGAACCGGGGCCGGAATTGGGGAATT
7._GU_175___
AAGGAACCGGGGCCGGAATTGGGGAATT
8._GU_175___
AAGGAACCGGGGCCGGAATTGGGGAATT
9._GU_175___
AAGGAACCGGGGCCGGAATTGGGGAATT
10._GU_175___
AAGGAACCGGGGCCGGAATTGGGGAATT
11._GU_175___
AAGGAACCGGGGCCGGAATTGGGGAATT
12._GU_175___
AAGGAACCGGGGCCGGAATTGGGGAATT
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
GGGGGGTTGGAACCAAGGCCAGCCCCGG
1._GU_175___
GGGGGGTTCGAACCCCGGAAAGCCAAGG
2._GU_175___
GGGGGGTTCC__CCAAGGGGAGCCCC__
3._GU_175___
GGGGGGTTCC__CCAAGGGGAGCCCCCC
4._GU_175___
GGGGGGTTCC__CCAAGGGGAGCCCCCC
5._GU_175___
GGGGGGTTCC__CCAAGGGGAGCCCCCC
6._GU_175___
GGGGGGTTCC__CCAAGGGGAGCCCCCC
7._GU_175___
GGGGGGTTCC__CCAAGGGGAGCCCCCC
8._GU_175___
GGGGGGTTCC__CCAAGGGGAGCCCCCC
9._GU_175___
GGGGGGTTCC__CCAAGGGGAGCCCCCC
10._GU_175___
GGGGGGTTCC__CCAAGGGGAGCCCCCC
11._GU_175___
GGGGGGTTCC__CCAAGGGGAGCCCCCC
12._GU_175___
GGGGGGTTCC__CCAAGGGGAGCCCCCC
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
GGGGAAAACCAAAACCAAAAAACCGGCC
1._GU_175___
AAAGAGAACCGGAAAAAAAAACCCGGCC
2._GU_175___
CCCCAAAAGGAATTGGTTTTAAGG__GG
3._GU_175___
CCCCAAAAGGAATTGGTTTTAAGG__GG
4._GU_175___
CCCCAAAAGGAATTGGTTTTAAGG__GG
5._GU_175___
CCCCAAAAGGAATTGGTTTTAAGG__GG
6._GU_175___
CCCCAAAAGGAATTGGTTTTAAGG__GG
7._GU_175___
CCCCAAAAGGAATTGGTTTTAAGG__GG
8._GU_175___
CCCCAAAAGGAATTGGTTTTAAGG__GG
9._GU_175___
CCCCAAAAGGAATTGGTTTTAAGG__GG
10._GU_175___
CCCCAAAAGGAATTGGTTTTAAGG__GG
11._GU_175___
CCCCAAAAGGAATTGGTTTTAAGG__GG
12._GU_175___
CCCCAAAAGGAATTGGTTTTAAGG__GG
 71 72 73 74 75 76 77 78 79 80     
_Input profile
GGGGGGCCGGGGGGAAGGAAX_XX_XX_XX_X
1._GU_175___
GGGGAACCAACGGGAAAAAGX_XX_XX_XX_X
2._GU_175___
CCCCGGCCCCGGCCAACCAAX_XX_XX_XX_X
3._GU_175___
CCCCGGCCCCGGCCAACCAAX_XX_XX_XX_X
4._GU_175___
CCCCGGCCCCGGCCAACCAAX_XX_XX_XX_X
5._GU_175___
CCCCGGCCCCGGCCAACCAAX_XX_XX_XX_X
6._GU_175___
CCCCGGCCCCGGCCAACCAAX_XX_XX_XX_X
7._GU_175___
CCCCGGCCCCGGCCAACCAAX_XX_XX_XX_X
8._GU_175___
CCCCGGCCCCGGCCAACCAAX_XX_XX_XX_X
9._GU_175___
CCCCGGCCCCGGCCAACCAAX_XX_XX_XX_X
10._GU_175___
CCCCGGCCCCGGCCAACCAAX_XX_XX_XX_X
11._GU_175___
CCCCGGCCCCGGCCAACCAAX_XX_XX_XX_X
12._GU_175___
CCCCGGCCCCGGCCAACCAAX_XX_XX_XX_X

Input profile: GU_175 GC-01-100-5-17

 
Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 5, Rep: 17, Tree: 6
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

1._GU_175 MITC-000401

66.9 %
80 shared markers

USDA-SHRS, United States of America
 Mars, 2018

2._GU_175 GC-01-100-5-17

49.4 %
77 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8 > FP3
 Mars, 2018

3._GU_175 GC-01-100-5-17

48.7 %
78 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

4._GU_175 GC-01-100-5-17

48.7 %
78 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

5._GU_175 GC-01-100-5-17

48.7 %
78 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

6._GU_175 GC-01-100-5-17

48.7 %
78 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14
 Mars, 2018

7._GU_175 GC-01-100-5-17

48.7 %
78 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 15
Notes: 15
 Mars, 2018

8._GU_175 GC-05-097-2-48

48.7 %
78 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

9._GU_175 GC-05-097-2-48

48.7 %
78 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP2
 Mars, 2018

10._GU_175 GC-05-097-2-48

48.7 %
78 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4 > FP3
 Mars, 2018

11._GU_175 GC-05-097-2-48

48.7 %
78 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

12._GU_175 GC-01-100-5-17

48.1 %
77 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11 > FP2
 Mars, 2018

 


  Key to SNP Markers

1Tcm001s00947643 2Tcm003s01336581 3Tcm003s07402719 4Tcm006s26664133 5TcSNP1034
6TcSNP1060 7TcSNP1062 8TcSNP1063 9TcSNP1075 10TcSNP1096
11TcSNP1111 12TcSNP1149 13TcSNP1156 14TcSNP1175 15TcSNP122
16TcSNP1253 17TcSNP1270 18TcSNP1309 19TcSNP1383 20TcSNP1414
21TcSNP1439 22TcSNP144 23TcSNP1442 24TcSNP1458 25TcSNP1484
26TcSNP150 27TcSNP151 28TcSNP1520 29TcSNP154 30TcSNP174
31TcSNP193 32TcSNP226 33TcSNP230 34TcSNP240 35TcSNP242
36TcSNP25 37TcSNP316 38TcSNP32 39TcSNP329 40TcSNP364
41TcSNP372 42TcSNP413 43TcSNP418 44TcSNP42 45TcSNP429
46TcSNP430 47TcSNP448 48TcSNP497 49TcSNP521 50TcSNP529
51TcSNP547 52TcSNP560 53TcSNP561 54TcSNP577 55TcSNP591
56TcSNP60 57TcSNP602 58TcSNP619 59TcSNP653 60TcSNP689
61TcSNP723 62TcSNP731 63TcSNP75 64TcSNP751 65TcSNP776
66TcSNP799 67TcSNP823 68TcSNP836 69TcSNP860 70TcSNP872
71TcSNP891 72TcSNP894 73TcSNP899 74TcSNP90 75TcSNP917
76TcSNP929 77TcSNP944 78TcSNP953 79TcSNP994 80TcSNP998