SNP Profiles of MAR 9   View Data

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 Key

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_Input profile
TTCCCCTTCCGGAACCAACCGGGGAACC
1._RUQ_557
____CC__________AA__GG______
2._MAR_9
______TT________AACC________
3._RUQ_557
AACCCCAAGGGGAAGGAAGGGGGGAAGG
 1516171819202122232425262728
_Input profile
AACCTTTTGGAACCTTTTGGGGTTAAGG
1._RUQ_557
________GGAACC__TTGGGG__AAGG
2._MAR_9
AACCTT__GG____TT__GG________
3._RUQ_557
__CC__AAGGAAGGAA__CCGGAAAACC
 2930313233343536373839404142
_Input profile
CCCCAATTCCGGAATTTTTTTTCCGGAA
1._RUQ_557
____AATT________TT______GG__
2._MAR_9
__CCAA________________CCGGAA
3._RUQ_557
__GGAA__GGCCAA__AAAAAAGGCCAA

Input profile: MAR_9 RUQ_557

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

1._MAR_9 RUQ_557

identical
15 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

2._MAR_9

identical
14 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 4A B220 T3
 Dapeng Zhang, 2014

3._MAR_9 RUQ_557

44.4 %
36 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

 


  Key to SNP Markers

1TcSNP75 2TcSNP90 3TcSNP144 4TcSNP150 5TcSNP151
6TcSNP174 7TcSNP193 8TcSNP226 9TcSNP230 10TcSNP242
11TcSNP329 12TcSNP364 13TcSNP372 14TcSNP448 15TcSNP469
16TcSNP529 17TcSNP534 18TcSNP560 19TcSNP577 20TcSNP591
21TcSNP602 22TcSNP619 23TcSNP702 24TcSNP723 25TcSNP731
26TcSNP799 27TcSNP823 28TcSNP872 29TcSNP878 30TcSNP891
31TcSNP998 32TcSNP999 33TcSNP1060 34TcSNP1063 35TcSNP1111
36TcSNP1126 37TcSNP1253 38TcSNP1309 39TcSNP1439 40TcSNP1442
41TcSNP1458 42TcSNP1484