SNP Profiles of GU 207 /H   View Data

 Show/Hide Profiles

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
TTCCAATTTTGGAACCGGCCGGGGAACC
1._RUQ_225
____AA__________GG__GG______
2._RUQ_225
____AAGTTT__AACCGGCC____AA__
3._GU_207_/H
______TTCC__AACCAACC____AA__
4._GU_207_/H
____CCTTCC__AACCAACC____AA__
5._GU_207_/H
____CCTTCC__AACCAACC____AA__
6._GU_207_/H
____CCTTCC__AACCAACC____AA__
7._GU_207_/H
____CCTTCC__AACCAACC____AA__
8._GU_207_/H
____CCTTCC__AACCAACC____AA__
9._GU_207_/H
____CCTTCC__AACCAACC____AA__
10._GU_207_/H
____CCTTCC__AACCAACC____AA__
11._GU_207_/H
____CCTTCC__AACCAACC____AA__
12._GU_207_/H
____CCTTCC____CCAACC____AA__
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
GGAACCGGCCCCCCCCCCGGAATTAAGG
1._RUQ_225
__AA____CCCCCC__CCGGAA__AAGG
2._RUQ_225
GGAACCGGCCCC__CC__GG______GG
3._GU_207_/H
AACCTTTTCCAA__TT__GG______GG
4._GU_207_/H
AACCTTTTCCAA__TT__GG______GG
5._GU_207_/H
AACCTTTTCCAA__TT__GG______GG
6._GU_207_/H
AACCTTTTCCAA__TT__GG______GG
7._GU_207_/H
AACCTTTTCCAA__TT__GG______GG
8._GU_207_/H
AACCTTTTCCAA__TT__GG______GG
9._GU_207_/H
AACCTTTTCCAA__TT__GG______GG
10._GU_207_/H
AACCTTTTCCAA__TT__GG______GG
11._GU_207_/H
AACCTTTTCCAA__TT__GG______GG
12._GU_207_/H
AACCTTTTCCAA__TT__GG______GG
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
CCCCGGCCCCGGGGTTTTCTCCCCGGGG
1._RUQ_225
____GGCC________TT______GG__
2._RUQ_225
__CCGG__CC______TT____CCGGGG
3._GU_207_/H
__CCGG__CC______TT____CCGGAA
4._GU_207_/H
__CCGG__CC______TT____CCGGAA
5._GU_207_/H
__CCGG__CC______TT____CCGGAA
6._GU_207_/H
__CCGG__CC______TT____CCGGAA
7._GU_207_/H
__CCGG__CC______TT____CCGGAA
8._GU_207_/H
__CCGG__CC______TT____CCGGAA
9._GU_207_/H
__CCGG__CC______TT____CCGGAA
10._GU_207_/H
__CCGG__CC______TT____CCGGAA
11._GU_207_/H
__CCGG__CC______TT____CCGGAA
12._GU_207_/H
__CCGG__CC______TT____CCGGAA

Input profile: GU_207_/H RUQ_225

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

1._GU_207_/H RUQ_225

identical
16 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

2._GU_207_/H RUQ_225

97.9 %
24 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

3._GU_207_/H

60.9 %
23 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 13
 Dapeng Zhang, 2016

4._GU_207_/H

58.3 %
24 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 6 > FP
 Dapeng Zhang, 2016

5._GU_207_/H

58.3 %
24 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 12 > F
 Dapeng Zhang, 2016

6._GU_207_/H

58.3 %
24 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 1 > FP
 Dapeng Zhang, 2016

7._GU_207_/H

58.3 %
24 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 11
 Dapeng Zhang, 2016

8._GU_207_/H

58.3 %
24 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 10
 Dapeng Zhang, 2016

9._GU_207_/H

58.3 %
24 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 9
 Dapeng Zhang, 2016

10._GU_207_/H

58.3 %
24 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 7
 Dapeng Zhang, 2016

11._GU_207_/H

58.3 %
24 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 4
 Dapeng Zhang, 2016

12._GU_207_/H

56.5 %
23 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 2
 Dapeng Zhang, 2016

 


  Key to SNP Markers

1TcSNP75 2TcSNP90 3TcSNP144 4TcSNP150 5TcSNP151
6TcSNP174 7TcSNP193 8TcSNP226 9TcSNP230 10TcSNP242
11TcSNP329 12TcSNP364 13TcSNP372 14TcSNP448 15TcSNP469
16TcSNP529 17TcSNP534 18TcSNP560 19TcSNP577 20TcSNP591
21TcSNP602 22TcSNP619 23TcSNP702 24TcSNP723 25TcSNP731
26TcSNP799 27TcSNP823 28TcSNP872 29TcSNP878 30TcSNP891
31TcSNP998 32TcSNP999 33TcSNP1060 34TcSNP1063 35TcSNP1111
36TcSNP1126 37TcSNP1253 38TcSNP1309 39TcSNP1439 40TcSNP1442
41TcSNP1458 42TcSNP1484