SNP Profiles of CERRO AZUL 10 View Data

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	TT	CC	AC	TT	CT	GG	AC	CC	AG	TT	AG	GG	AA	CC
1._RUQ_936	TT	CC	CC	TT	CC	GG	AA	CC	AG	CT	GG	GG	AA	CC
2._RUQ_936	__	__	CC	__	__	__	__	__	AG	__	GG	__	__	__
3._GC-05-077-2-28	TT	CC	CC	TT	CC	GG	AA	CC	AG	CT	GG	GG	AA	CC
4._GC-05-077-2-28	TT	CC	CC	TT	CC	GG	AA	CC	AG	CT	GG	GG	AA	CC
5._GC-05-077-2-28	TT	CC	CC	TT	CC	GG	AA	CC	AG	CT	GG	GG	AA	CC
6._GC-05-077-2-28	TT	CC	CC	TT	CC	GG	AA	CC	AG	CT	GG	GG	AA	CC
7._GC-05-077-2-28	TT	CC	CC	TT	CC	GG	AA	CC	AG	CT	GG	GG	AA	CC
8._GC-05-77-2-28	AA	CC	CC	AA	GG	GG	AA	GG	AG	AG	GG	GG	AA	GG
9._RUQ_936	AA	CC	CC	AA	GG	GG	AA	GG	AG	AG	GG	GG	AA	GG

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AA	CC	CT	GG	GG	AA	CT	CC	TT	GG	GG	TT	AA	CC
1._RUQ_936	AA	CC	__	TT	CG	CC	TT	TT	TT	GT	GG	TT	CC	GG
2._RUQ_936	__	CC	__	__	CG	CC	__	__	TT	GT	GG	__	__	__
3._GC-05-077-2-28	AA	CC	TT	TT	CG	CC	TT	TT	CC	GT	GG	TT	CC	GG
4._GC-05-077-2-28	AA	CC	TT	TT	CG	CC	TT	TT	CC	GT	GG	TT	CC	GG
5._GC-05-077-2-28	AA	CC	TT	TT	CG	CC	TT	TT	CC	GT	GG	TT	CC	GG
6._GC-05-077-2-28	AA	CC	TT	TT	CG	CC	TT	TT	CC	GT	GG	TT	CC	GG
7._GC-05-077-2-28	AA	CC	TT	TT	CG	CC	TT	TT	CC	GT	GG	TT	CC	GG
8._GC-05-77-2-28	__	CC	__	AA	CG	CC	AA	AA	__	AC	GG	AA	CC	CC
9._RUQ_936	__	CC	__	AA	CG	CC	AA	AA	__	AC	GG	AA	CC	CC

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	CC	CC	AA	CC	CT	GG	GG	TT	TT	TT	CC	TT	CG	AG
1._RUQ_936	CC	CC	AA	TT	CC	GG	AG	TT	TT	TT	TT	CT	GG	AA
2._RUQ_936	__	__	AA	TT	__	__	__	__	TT	__	__	__	__	__
3._GC-05-077-2-28	CC	CC	AA	TT	CC	GG	AG	TT	TT	TT	TT	CT	GG	AA
4._GC-05-077-2-28	CC	CC	AA	TT	CC	GG	AG	TT	TT	TT	TT	CT	GG	AA
5._GC-05-077-2-28	CC	CC	AA	TT	CC	GG	AG	TT	TT	TT	TT	CT	GG	AA
6._GC-05-077-2-28	CC	CC	AA	TT	CC	GG	AG	TT	TT	TT	TT	CT	GG	AA
7._GC-05-077-2-28	CC	CC	AA	TT	CC	GG	AG	TT	TT	TT	TT	CT	GG	AA
8._GC-05-77-2-28	__	GG	AA	__	GG	CC	AG	__	AA	AA	AA	AG	CC	AA
9._RUQ_936	__	GG	AA	__	GG	CC	AG	__	AA	AA	AA	AG	CC	AA

Input profile: CERRO_AZUL_10 RUQ_936

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

1._CERRO_AZUL_10 RUQ_936

67.1 %
41 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

2._CERRO_AZUL_10 RUQ_936

66.7 %
12 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

View Data

Ame
0.972

3._CERRO_AZUL_10 GC-05-077-2-28

64.3 %
42 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1 > FP1

Mars, 2018

4._CERRO_AZUL_10 GC-05-077-2-28

64.3 %
42 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2 > FP2

Mars, 2018

5._CERRO_AZUL_10 GC-05-077-2-28

64.3 %
42 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3 > FP3

Mars, 2018

6._CERRO_AZUL_10 GC-05-077-2-28

64.3 %
42 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4 > FP4

Mars, 2018

7._CERRO_AZUL_10 GC-05-077-2-28

64.3 %
42 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 5

Notes: 5

Mars, 2018

8._CERRO_AZUL_10 GC-05-77-2-28

34.7 %
36 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Field: 5, Block: 2, Rep: 28, Tree: 5

Notes: MCCS_Structure_refs_above_0.9membership

Mars, 2018

9._CERRO_AZUL_10 RUQ_936

34.7 %
36 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

Mars, 2018

Key to SNP Markers

1	TcSNP75	2	TcSNP90	3	TcSNP144	4	TcSNP150	5	TcSNP151
6	TcSNP174	7	TcSNP193	8	TcSNP226	9	TcSNP230	10	TcSNP242
11	TcSNP329	12	TcSNP364	13	TcSNP372	14	TcSNP448	15	TcSNP469
16	TcSNP529	17	TcSNP534	18	TcSNP560	19	TcSNP577	20	TcSNP591
21	TcSNP602	22	TcSNP619	23	TcSNP702	24	TcSNP723	25	TcSNP731
26	TcSNP799	27	TcSNP823	28	TcSNP872	29	TcSNP878	30	TcSNP891
31	TcSNP998	32	TcSNP999	33	TcSNP1060	34	TcSNP1063	35	TcSNP1111
36	TcSNP1126	37	TcSNP1253	38	TcSNP1309	39	TcSNP1439	40	TcSNP1442
41	TcSNP1458	42	TcSNP1484

SNP Profiles of CERRO AZUL 10 View Data

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Input profile: CERRO_AZUL_10 RUQ_936

1._CERRO_AZUL_10 RUQ_936

67.1 % 41 shared markers

2._CERRO_AZUL_10 RUQ_936

66.7 % 12 shared markers

3._CERRO_AZUL_10 GC-05-077-2-28

64.3 % 42 shared markers

4._CERRO_AZUL_10 GC-05-077-2-28

64.3 % 42 shared markers

5._CERRO_AZUL_10 GC-05-077-2-28

64.3 % 42 shared markers

6._CERRO_AZUL_10 GC-05-077-2-28

64.3 % 42 shared markers

7._CERRO_AZUL_10 GC-05-077-2-28

64.3 % 42 shared markers

8._CERRO_AZUL_10 GC-05-77-2-28

34.7 % 36 shared markers

9._CERRO_AZUL_10 RUQ_936

34.7 % 36 shared markers

67.1 %
41 shared markers

66.7 %
12 shared markers

64.3 %
42 shared markers

64.3 %
42 shared markers

64.3 %
42 shared markers

64.3 %
42 shared markers

64.3 %
42 shared markers

34.7 %
36 shared markers

34.7 %
36 shared markers