SNP Profiles of AMAZ 11 [CHA]   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
CTCCAAGGTTAACCCCGGCCAAAGTTCC
1._RUQ_1600
____AA__________GG__AA______
2._RUQ_1600
AGCCAACCAAAACCGGGGGGAAAGTTCG
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
GGAACCGGGGCCCCTTCCTTAATTCCCC
1._RUQ_1600
__AA____GGCCCC__CCTTAA__CCCC
2._RUQ_1600
__AA__CCGGCCGGAA__AAAAAACCGG
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
CCTTAACCCCGGGGTTGGCCCCTTCCGG
1._RUQ_1600
____AACC________GG______CC__
2._RUQ_1600
__AAAA__GGCCGG____GGGGAAGGGG

Input profile: AMAZ_11 RUQ_1600

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

1._AMAZ_11 RUQ_1600

identical
16 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

2._AMAZ_11 RUQ_1600

47.1 %
35 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

 


  Key to SNP Markers

1TcSNP75 2TcSNP90 3TcSNP144 4TcSNP150 5TcSNP151
6TcSNP174 7TcSNP193 8TcSNP226 9TcSNP230 10TcSNP242
11TcSNP329 12TcSNP364 13TcSNP372 14TcSNP448 15TcSNP469
16TcSNP529 17TcSNP534 18TcSNP560 19TcSNP577 20TcSNP591
21TcSNP602 22TcSNP619 23TcSNP702 24TcSNP723 25TcSNP731
26TcSNP799 27TcSNP823 28TcSNP872 29TcSNP878 30TcSNP891
31TcSNP998 32TcSNP999 33TcSNP1060 34TcSNP1063 35TcSNP1111
36TcSNP1126 37TcSNP1253 38TcSNP1309 39TcSNP1439 40TcSNP1442
41TcSNP1458 42TcSNP1484