SNP Profiles of GU 123/C   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
CCGGGGCCTTTTTTCCCCAAGGCCAACT
1._GC-01-095-5-12
CCGGGGCCTTTTTTCCCCAAGGCCAACT
2._GC-01-095-5-12
CCGGGGCCTTTTTTCCCCAAGGCCAACT
3._GC-01-095-5-12
CCGGGGCCTTTTTTCCCCAAGGCCAACT
4._GC-01-095-5-12
CCGGGGCCTTTTTTCCCCAAGGCCAACT
5._GC-01-095-5-12
CCGGGGCCTTTTTTCCCCAAGGCCAACT
6._GC-01-095-5-12
CCGGGGCCTTTTTTCCCCAAGGCCAACT
7._GC-01-095-5-12
CCGGGGCCTTTTTTCCCCAAGGCCAACT
8._GC-01-095-5-12
CCGGGGCCTTTTTTCCCCAAGGCCAACT
9._GU_123_/C
CCGGGGCCTTTTTTCCCCAAGGCCAACT
10._GU_123_/C
CCGGGGCCTTTTTTCCCCAAGGCCAACT
11._GU_123_/C
CCGGGGCCTTTTTTCCCCAAGGCCAACT
12._GU_123_/C
CCGGGGCCTTTTTTCCCCAAGGCCAACT
13._GU_123_/C
CCGGGGCCTTTTTTCCCCAAGGCCAACT
14._GU_123_/C
CCGGGGCCTTTTTTCCCCAAGGCCAACT
15._GU_123_/C
CCGGGGCCTTTTTTCCCCAAGGCCAACT
16._GU_123_/C
CCGGGGCCTTTTTTCCCCAAGGCCAACT
17._GC-01-95-5-12
GGGGCCGGAAAAAA____AAGGGGAAAG
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
AAGGCCCCGGGGAATTCCCCGGCCAAAG
1._GC-01-095-5-12
AAGGCCCCGGGGAATTCCCCGGCCAAAG
2._GC-01-095-5-12
AAGGCCCCGGGGAATTCCCCGGCCAAAG
3._GC-01-095-5-12
AAGGCCCCGGGGAATTCCCCGGCCAAAG
4._GC-01-095-5-12
AAGGCCCCGGGGAATTCCCCGGCCAAAG
5._GC-01-095-5-12
AAGGCCCCGGGGAATTCCCCGGCCAAAG
6._GC-01-095-5-12
AAGGCCCCGGGGAATTCCCCGGCCAAAG
7._GC-01-095-5-12
AAGGCCCCGGGGAATTCCCCGGCCAAAG
8._GC-01-095-5-12
AAGGCCCCGGGGAATTCCCCGGCCAAAG
9._GU_123_/C
AAGGCCCCGGGGAATTCCCCGGCCAAAG
10._GU_123_/C
AAGGCCCCGGGGAATTCCCCGGCCAAAG
11._GU_123_/C
AAGGCCCCGGGGAATTCCCCGGCCAAAG
12._GU_123_/C
AAGGCCCCGGGGAATTCCCCGGCCAAAG
13._GU_123_/C
AAGGCCCCGGGGAATTCCCCGGCCAAAG
14._GU_123_/C
AAGGCCCCGGGGAATTCCCCGGCCAAAG
15._GU_123_/C
AAGGCCCCGGGGAATTCCCCGGCCAAAG
16._GU_123_/C
AAGGCCCCGGGGAATTCCCCGGCCAAAG
17._GC-01-95-5-12
AAGGGGGGCCCC__AACCCCCC__AA__
 29 30 31 32 33 34 35 36 37 38 39    
_Input profile
GGAACCGGCCAATTTTAATTGGX_XX_XX_X
1._GC-01-095-5-12
GGAACCGGCCAATTTTAATTGGX_XX_XX_X
2._GC-01-095-5-12
GGAACCGGCCAATTTTAATTGGX_XX_XX_X
3._GC-01-095-5-12
GGAACCGGCCAATTTTAATTGGX_XX_XX_X
4._GC-01-095-5-12
GGAACCGGCCAATTTTAATTGGX_XX_XX_X
5._GC-01-095-5-12
GGAACCGGCCAATTTTAATTGGX_XX_XX_X
6._GC-01-095-5-12
GGAACCGGCCAATTTTAATTGGX_XX_XX_X
7._GC-01-095-5-12
GGAACCGGCCAATTTTAATTGGX_XX_XX_X
8._GC-01-095-5-12
GGAACCGGCCAATTTTAATTGGX_XX_XX_X
9._GU_123_/C
GGAACCGGCCAATTTTAATTGGX_XX_XX_X
10._GU_123_/C
GGAACCGGCCAATTTTAATTGGX_XX_XX_X
11._GU_123_/C
GGAACCGGCCAATTTTAATTGGX_XX_XX_X
12._GU_123_/C
GGAACCGGCCAATTTTAATTGGX_XX_XX_X
13._GU_123_/C
GGAACCGGCCAATTTTAATTGGX_XX_XX_X
14._GU_123_/C
GGAACCGGCCAATTTTAATTGGX_XX_XX_X
15._GU_123_/C
GGAACCGGCCAATTTTAATTGGX_XX_XX_X
16._GU_123_/C
GGAACCGGCCAATTTTAATTGGX_XX_XX_X
17._GC-01-95-5-12
GGAAGGGGGGAAAAAAAATTGGX_XX_XX_X

Input profile: GU_123_/C

 
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Mars Center for Cocoa Science, Brazil
Location: 1512 2
 Dapeng Zhang, 2016

1._GU_123_/C GC-01-095-5-12

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14
 Mars, 2018

2._GU_123_/C GC-01-095-5-12

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13 > FP4
 Mars, 2018

3._GU_123_/C GC-01-095-5-12

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

4._GU_123_/C GC-01-095-5-12

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

5._GU_123_/C GC-01-095-5-12

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4 > FP3
 Mars, 2018

6._GU_123_/C GC-01-095-5-12

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

7._GU_123_/C GC-01-095-5-12

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

8._GU_123_/C GC-01-095-5-12

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

9._GU_123_/C

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1512 4 > FP3
 Dapeng Zhang, 2016

10._GU_123_/C

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1512 3
 Dapeng Zhang, 2016

11._GU_123_/C

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1512 6
 Dapeng Zhang, 2016

12._GU_123_/C

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1512 9
 Dapeng Zhang, 2016

13._GU_123_/C

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1512 14
 Dapeng Zhang, 2016

14._GU_123_/C

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1512 1 > FP
 Dapeng Zhang, 2016

15._GU_123_/C

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1512 13 > FP4
 Dapeng Zhang, 2016

16._GU_123_/C

identical
39 shared markers

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Cocoa Research Institute of Ghana (CRIG), Ghana
Location: Q6_EXT_2 44
 Dapeng Zhang, 2016

17._GU_123_/C GC-01-95-5-12

47.1 %
34 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 5, Rep: 12, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

 

  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1270 7TcSNP1253 8TcSNP1165 9TcSNP1144 10TcSNP1075
11TcSNP1062 12TcSNP1060 13TcSNP998 14TcSNP994 15TcSNP953
16TcSNP929 17TcSNP917 18TcSNP891 19TcSNP872 20TcSNP723
21TcSNP645 22TcSNP619 23TcSNP591 24TcSNP577 25TcSNP560
26TcSNP534 27TcSNP529 28TcSNP469 29TcSNP429 30TcSNP372
31TcSNP242 32TcSNP230 33TcSNP226 34TcSNP193 35TcSNP151
36TcSNP150 37TcSNP144 38TcSNP32 39TcSNP25