SNP Profiles of GU 154 /C   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
1._GC-01-078-4-14
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
2._GC-01-078-4-14
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
3._GC-01-078-4-14
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
4._GC-01-078-4-14
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
5._GC-01-078-4-14
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
6._GC-01-078-4-14
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
7._GC-01-078-4-14
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
8._GC-01-078-4-14
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
9._GC-01-078-4-14
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
10._GC-01-078-4-14
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
11._GC-01-078-4-14
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
12._GU_154_/C
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
13._GU_154_/C
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
14._GU_154_/C
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
15._GU_154_/C
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
16._GU_154_/C
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
17._GU_154_/C
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
18._GU_154_/C
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
19._GU_154_/C
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
20._GU_154_/C
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
21._GU_154_/C
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
22._GC-01-078-4-14
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
23._GC-01-078-4-14
CCGGCGCCTTTTTTCCCCAAGG__AGCC
24._GC-01-078-4-14
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
25._GU_154_/C
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
26._GU_154_/C
CCGGCGCCTTTTTTCCCCAAGG__AGCC
27._GU_154_/C
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
28._GC-01-78-4-14
GGGGCGGGAAAAAA____AAGGGGAGGG
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
AAGGCCCCGGGGGGCCACCCGGCCAAGG
1._GC-01-078-4-14
AAGGCCCCGGGGGGCCACCCGGCCAAGG
2._GC-01-078-4-14
AAGGCCCCGGGGGGCCACCCGGCCAAGG
3._GC-01-078-4-14
AAGGCCCCGGGGGGCCACCCGGCCAAGG
4._GC-01-078-4-14
AAGGCCCCGGGGGGCCACCCGGCCAAGG
5._GC-01-078-4-14
AAGGCCCCGGGGGGCCACCCGGCCAAGG
6._GC-01-078-4-14
AAGGCCCCGGGGGGCCACCCGGCCAAGG
7._GC-01-078-4-14
AAGGCCCCGGGGGGCCACCCGGCCAAGG
8._GC-01-078-4-14
AAGGCCCCGGGGGGCCACCCGGCCAAGG
9._GC-01-078-4-14
AAGGCCCCGGGGGGCCACCCGGCCAAGG
10._GC-01-078-4-14
AAGGCCCCGGGGGGCCACCCGGCCAAGG
11._GC-01-078-4-14
AAGGCCCCGGGGGGCCACCCGGCCAAGG
12._GU_154_/C
AAGGCCCCGGGGGGCCACCCGGCCAAGG
13._GU_154_/C
AAGGCCCCGGGGGGCCACCCGGCCAAGG
14._GU_154_/C
AAGGCCCCGGGGGGCCACCCGGCCAAGG
15._GU_154_/C
AAGGCCCCGGGGGGCCACCCGGCCAAGG
16._GU_154_/C
AAGGCCCCGGGGGGCCACCCGGCCAAGG
17._GU_154_/C
AAGGCCCCGGGGGGCCACCCGGCCAAGG
18._GU_154_/C
AAGGCCCCGGGGGGCCACCCGGCCAAGG
19._GU_154_/C
AAGGCCCCGGGGGGCCACCCGGCCAAGG
20._GU_154_/C
AAGGCCCCGGGGGGCCACCCGGCCAAGG
21._GU_154_/C
AAGGCCCCGGGGGGCCACCCGGCCAAGG
22._GC-01-078-4-14
AAGGCCCCGGGGGGCCACCCGGCCAAGG
23._GC-01-078-4-14
AAGGCCCCGGGGGGCCACCCGGCCAAGG
24._GC-01-078-4-14
AAGGCCCCGGGG__CCACCCGGCCAAGG
25._GU_154_/C
AAGGCCCCGGGG__CCACCCGGCCAAGG
26._GU_154_/C
AAGGCCCCGGGGGGCCACCCGGCCAAGG
27._GU_154_/C
AAGGCCCCGGGGGGCCACCCGGCCAAGG
28._GC-01-78-4-14
AAGGGGGGCCCC__GGACCCCC__AA__
 29 30 31 32 33 34 35 36 37 38     
_Input profile
GGAACCGGCCTTTTAAATGGX_XX_XX_XX_X
1._GC-01-078-4-14
GGAACCGGCCTTTTAAATGGX_XX_XX_XX_X
2._GC-01-078-4-14
GGAACCGGCCTTTTAAATGGX_XX_XX_XX_X
3._GC-01-078-4-14
GGAACCGGCCTTTTAAATGGX_XX_XX_XX_X
4._GC-01-078-4-14
GGAACCGGCCTTTTAAATGGX_XX_XX_XX_X
5._GC-01-078-4-14
GGAACCGGCCTTTTAAATGGX_XX_XX_XX_X
6._GC-01-078-4-14
GGAACCGGCCTTTTAAATGGX_XX_XX_XX_X
7._GC-01-078-4-14
GGAACCGGCCTTTTAAATGGX_XX_XX_XX_X
8._GC-01-078-4-14
GGAACCGGCCTTTTAAATGGX_XX_XX_XX_X
9._GC-01-078-4-14
GGAACCGGCCTTTTAAATGGX_XX_XX_XX_X
10._GC-01-078-4-14
GGAACCGGCCTTTTAAATGGX_XX_XX_XX_X
11._GC-01-078-4-14
GGAACCGGCCTTTTAAATGGX_XX_XX_XX_X
12._GU_154_/C
GGAACCGGCCTTTTAAATGGX_XX_XX_XX_X
13._GU_154_/C
GGAACCGGCCTTTTAAATGGX_XX_XX_XX_X
14._GU_154_/C
GGAACCGGCCTTTTAAATGGX_XX_XX_XX_X
15._GU_154_/C
GGAACCGGCCTTTTAAATGGX_XX_XX_XX_X
16._GU_154_/C
GGAACCGGCCTTTTAAATGGX_XX_XX_XX_X
17._GU_154_/C
GGAACCGGCCTTTTAAATGGX_XX_XX_XX_X
18._GU_154_/C
GGAACCGGCCTTTTAAATGGX_XX_XX_XX_X
19._GU_154_/C
GGAACCGGCCTTTTAAATGGX_XX_XX_XX_X
20._GU_154_/C
GGAACCGGCCTTTTAAATGGX_XX_XX_XX_X
21._GU_154_/C
GGAACCGGCCTTTTAAATGGX_XX_XX_XX_X
22._GC-01-078-4-14
GG__CCGGCCTTTTAAATGGX_XX_XX_XX_X
23._GC-01-078-4-14
GGAACCGGCCTTTTAAATGGX_XX_XX_XX_X
24._GC-01-078-4-14
GGAACCGGCCTTTTAAATGGX_XX_XX_XX_X
25._GU_154_/C
GGAACCGGCCTTTTAAATGGX_XX_XX_XX_X
26._GU_154_/C
GGAACCGGCCTTTTAAATGGX_XX_XX_XX_X
27._GU_154_/C
GG__CCGGCCTTTTAAATGGX_XX_XX_XX_X
28._GC-01-78-4-14
GGAAGGGGGGAAAAAAATGGX_XX_XX_XX_X

Input profile: GU_154_/C

 
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Mars Center for Cocoa Science, Brazil
Location: 1414 8
 Dapeng Zhang, 2016

1._GU_154_/C GC-01-078-4-14

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 16
Notes: 16
 Mars, 2018

2._GU_154_/C GC-01-078-4-14

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 15
Notes: 15 > FP4
 Mars, 2018

3._GU_154_/C GC-01-078-4-14

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14
 Mars, 2018

4._GU_154_/C GC-01-078-4-14

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

5._GU_154_/C GC-01-078-4-14

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12 > FP3
 Mars, 2018

6._GU_154_/C GC-01-078-4-14

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10 > FP2
 Mars, 2018

7._GU_154_/C GC-01-078-4-14

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

8._GU_154_/C GC-01-078-4-14

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

9._GU_154_/C GC-01-078-4-14

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

10._GU_154_/C GC-01-078-4-14

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

11._GU_154_/C GC-01-078-4-14

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

12._GU_154_/C

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1414 15 > F
 Dapeng Zhang, 2016

13._GU_154_/C

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1414 2
 Dapeng Zhang, 2016

14._GU_154_/C

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1414 3
 Dapeng Zhang, 2016

15._GU_154_/C

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1414 4
 Dapeng Zhang, 2016

16._GU_154_/C

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1414 9
 Dapeng Zhang, 2016

17._GU_154_/C

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1414 13
 Dapeng Zhang, 2016

18._GU_154_/C

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1414 14
 Dapeng Zhang, 2016

19._GU_154_/C

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1414 16
 Dapeng Zhang, 2016

20._GU_154_/C

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1414 10 > F
 Dapeng Zhang, 2016

21._GU_154_/C

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1414 12 > F
 Dapeng Zhang, 2016

22._GU_154_/C GC-01-078-4-14

identical
37 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

23._GU_154_/C GC-01-078-4-14

identical
37 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

24._GU_154_/C GC-01-078-4-14

identical
37 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

25._GU_154_/C

identical
37 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1414 5
 Dapeng Zhang, 2016

26._GU_154_/C

identical
37 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1414 7
 Dapeng Zhang, 2016

27._GU_154_/C

identical
37 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1414 1 > FP
 Dapeng Zhang, 2016

28._GU_154_/C GC-01-78-4-14

48.5 %
33 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 14, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

 

  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1270 7TcSNP1253 8TcSNP1165 9TcSNP1144 10TcSNP1075
11TcSNP1062 12TcSNP1060 13TcSNP998 14TcSNP994 15TcSNP953
16TcSNP929 17TcSNP917 18TcSNP891 19TcSNP872 20TcSNP723
21TcSNP645 22TcSNP619 23TcSNP591 24TcSNP577 25TcSNP560
26TcSNP534 27TcSNP529 28TcSNP469 29TcSNP429 30TcSNP372
31TcSNP242 32TcSNP230 33TcSNP226 34TcSNP151 35TcSNP150
36TcSNP144 37TcSNP32 38TcSNP25