SNP Profiles of GU 207   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
TTAAGGCCTTAACCTTCCTTAAAACCGG
1._GU_207_/H
TTAAGGCCTTAACCTTCCTTAAAACCGG
2._GU_207_/H
TTAAGGCCTTAACCTTCCTTAAAACCGG
3._GU_207_/H
TTAAGGCCTTAACCTTCCTTAAAACCGG
4._GU_207_/H
TTAAGGCCTTAACCTTCCTTAAAACCGG
5._GU_207_/H
TTAAGGCCTTAACCTTCCTTAAAACCGG
6._GU_207_/H
TTAAGGCCTTAACCTTCCTTAAAACCGG
7._GU_207_/H
TTAAGGCCTTAACCTTCCTTAAAACCGG
8._GU_207_/H
TTAAGGCCTTAACCTTCCTTAAAACCGG
9._GU_207_/H
TTAAGGCC__AACCTTCCTTAAAACCGG
10._RUQ_225
__GGGGCC______TT________CCGG
11._RUQ_225
CCGGGGCCTTCCTTTTCCCCAAGGCCGG
12._RUQ_225
____GG________TT__CC__GG__GG
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
TTAAGGTTCCGGGGGGTTAACCTTTTCC
1._GU_207_/H
TTAAGGTTCCGGGGGGTTAACCTTTTCC
2._GU_207_/H
TTAAGGTTCCGGGGGGTTAACCTTTTCC
3._GU_207_/H
TTAAGGTTCCGGGGGGTTAACCTTTTCC
4._GU_207_/H
TTAAGGTTCCGGGGGGTTAACCTTTTCC
5._GU_207_/H
TTAAGGTTCCGGGGGGTTAACCTTTTCC
6._GU_207_/H
TTAAGGTTCCGGGGGGTTAACCTTTTCC
7._GU_207_/H
TTAAGGTTCCGGGGGGTTAACCTTTTCC
8._GU_207_/H
TTAAGGTTCCGGGGGGTTAACCTTTTCC
9._GU_207_/H
TTAAGGTTCCGGGGGGTTAACCTTTTCC
10._RUQ_225
________CCGGGG__CCCCCCGGCCAA
11._RUQ_225
CCAAGGCCCCGGGGAACCCCCCGGCCAA
12._RUQ_225
__________GGGGAA__CCCC____AA
 29 30 31 32 33 34 35 36 37 38 39    
_Input profile
AAGGAACCAACCCCTTCCTTGGX_XX_XX_X
1._GU_207_/H
AAGGAACCAACCCCTTCCTTGGX_XX_XX_X
2._GU_207_/H
AAGGAACCAACCCCTTCCTTGGX_XX_XX_X
3._GU_207_/H
AAGGAACCAACCCCTTCCTTGGX_XX_XX_X
4._GU_207_/H
AAGGAACCAACCCCTTCCTTGGX_XX_XX_X
5._GU_207_/H
AAGGAACCAACCCCTTCCTTGGX_XX_XX_X
6._GU_207_/H
AAGGAACCAACCCCTTCCTTGGX_XX_XX_X
7._GU_207_/H
AAGGAACCAACCCCTTCCTTGGX_XX_XX_X
8._GU_207_/H
AAGGAACCAACCCCTTCCTTGGX_XX_XX_X
9._GU_207_/H
AAGGAACCAACCCCTT__TTGGX_XX_XX_X
10._RUQ_225
GG__AACCGGCCTTTTAA____X_XX_XX_X
11._RUQ_225
GGAGAACCGGCCTTGTAATTGGX_XX_XX_X
12._RUQ_225
________GG______AA____X_XX_XX_X

Input profile: GU_207_/H

 
Mars Center for Cocoa Science, Brazil
Location: 1311 2
 Dapeng Zhang, 2016

1._GU_207_/H

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 6 > FP
 Dapeng Zhang, 2016

2._GU_207_/H

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 12 > F
 Dapeng Zhang, 2016

3._GU_207_/H

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 1 > FP
 Dapeng Zhang, 2016

4._GU_207_/H

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 11
 Dapeng Zhang, 2016

5._GU_207_/H

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 10
 Dapeng Zhang, 2016

6._GU_207_/H

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 9
 Dapeng Zhang, 2016

7._GU_207_/H

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 7
 Dapeng Zhang, 2016

8._GU_207_/H

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 4
 Dapeng Zhang, 2016

9._GU_207_/H

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 13
 Dapeng Zhang, 2016

10._GU_207_/H RUQ_225

56.5 %
23 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

11._GU_207_/H RUQ_225

51.3 %
39 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

12._GU_207_/H RUQ_225

46.2 %
13 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

 


  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1350 7TcSNP1270 8TcSNP1253 9TcSNP1165 10TcSNP1144
11TcSNP1075 12TcSNP1062 13TcSNP1060 14TcSNP998 15TcSNP994
16TcSNP953 17TcSNP929 18TcSNP917 19TcSNP891 20TcSNP872
21TcSNP723 22TcSNP645 23TcSNP619 24TcSNP591 25TcSNP577
26TcSNP560 27TcSNP534 28TcSNP529 29TcSNP469 30TcSNP429
31TcSNP372 32TcSNP242 33TcSNP230 34TcSNP226 35TcSNP151
36TcSNP150 37TcSNP144 38TcSNP32 39TcSNP25