SNP Profiles of CATONGO   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
TTAAGGCCTTAACCTTCCTTAAAACCGG
1._GU_207_/H___
TTAAGGCCTTAACCTTCCTTAAAACCGG
2._GU_207_/H___
TTAAGGCCTTAACCTTCCTTAAAACCGG
3._GU_207_/H___
TTAAGGCCTTAACCTTCCTTAAAACCGG
4._GU_207_/H___
TTAAGGCCTTAACCTTCCTTAAAACCGG
5._GU_207_/H___
TTAAGGCCTTAACCTTCCTTAAAACCGG
6._GU_207_/H___
TTAAGGCCTTAACCTTCCTTAAAACCGG
7._GU_207_/H___
TTAAGGCCTTAACCTTCCTTAAAACCGG
8._GU_207_/H___
TTAAGGCCTTAACCTTCCTTAAAACCGG
9._GU_207_/H___
TTAAGGCC__AACCTTCCTTAAAACCGG
10._GU_207_/H___
__GGGGCC______TT________CCGG
11._GU_207_/H___
CCGGGGCCTTCCTTTTCCCCAAGGCCGG
12._GU_207_/H___
____GG________TT__CC__GG__GG
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
TTAAGGTTCCGGGGGGTTAACCTTTTCC
1._GU_207_/H___
TTAAGGTTCCGGGGGGTTAACCTTTTCC
2._GU_207_/H___
TTAAGGTTCCGGGGGGTTAACCTTTTCC
3._GU_207_/H___
TTAAGGTTCCGGGGGGTTAACCTTTTCC
4._GU_207_/H___
TTAAGGTTCCGGGGGGTTAACCTTTTCC
5._GU_207_/H___
TTAAGGTTCCGGGGGGTTAACCTTTTCC
6._GU_207_/H___
TTAAGGTTCCGGGGGGTTAACCTTTTCC
7._GU_207_/H___
TTAAGGTTCCGGGGGGTTAACCTTTTCC
8._GU_207_/H___
TTAAGGTTCCGGGGGGTTAACCTTTTCC
9._GU_207_/H___
TTAAGGTTCCGGGGGGTTAACCTTTTCC
10._GU_207_/H___
________CCGGGG__CCCCCCGGCCAA
11._GU_207_/H___
CCAAGGCCCCGGGGAACCCCCCGGCCAA
12._GU_207_/H___
__________GGGGAA__CCCC____AA
 29 30 31 32 33 34 35 36 37 38 39 40   
_Input profile
AAGGAACCAACCAACCTTCCTTGGX_XX_X
1._GU_207_/H___
AAGGAACCAACCAACCTTCCTTGGX_XX_X
2._GU_207_/H___
AAGGAACCAACCAACCTTCCTTGGX_XX_X
3._GU_207_/H___
AAGGAACCAACCAACCTTCCTTGGX_XX_X
4._GU_207_/H___
AAGGAACCAACCAACCTTCCTTGGX_XX_X
5._GU_207_/H___
AAGGAACCAACCAACCTTCCTTGGX_XX_X
6._GU_207_/H___
AAGGAACCAACCAACCTTCCTTGGX_XX_X
7._GU_207_/H___
AAGGAACCAACCAACCTTCCTTGGX_XX_X
8._GU_207_/H___
AAGGAACCAACC__CCTTCCTTGGX_XX_X
9._GU_207_/H___
AAGGAACCAACCAACCTT__TTGGX_XX_X
10._GU_207_/H___
GG__AACCGGCCAATTTTAA____X_XX_X
11._GU_207_/H___
GGAGAACCGGCCAATTGTAATTGGX_XX_X
12._GU_207_/H___
________GG________AA____X_XX_X

Input profile: GU_207_/H

 
Mars Center for Cocoa Science, Brazil
Location: 1311 11
 Dapeng Zhang, 2016

1._GU_207_/H

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 6 > FP
 Dapeng Zhang, 2016

2._GU_207_/H

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 12 > F
 Dapeng Zhang, 2016

3._GU_207_/H

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 1 > FP
 Dapeng Zhang, 2016

4._GU_207_/H

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 10
 Dapeng Zhang, 2016

5._GU_207_/H

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 9
 Dapeng Zhang, 2016

6._GU_207_/H

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 7
 Dapeng Zhang, 2016

7._GU_207_/H

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 4
 Dapeng Zhang, 2016

8._GU_207_/H

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 2
 Dapeng Zhang, 2016

9._GU_207_/H

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 13
 Dapeng Zhang, 2016

10._GU_207_/H RUQ_225

58.3 %
24 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

11._GU_207_/H RUQ_225

52.5 %
40 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

12._GU_207_/H RUQ_225

46.2 %
13 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

 


  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1350 7TcSNP1270 8TcSNP1253 9TcSNP1165 10TcSNP1144
11TcSNP1075 12TcSNP1062 13TcSNP1060 14TcSNP998 15TcSNP994
16TcSNP953 17TcSNP929 18TcSNP917 19TcSNP891 20TcSNP872
21TcSNP723 22TcSNP645 23TcSNP619 24TcSNP591 25TcSNP577
26TcSNP560 27TcSNP534 28TcSNP529 29TcSNP469 30TcSNP429
31TcSNP372 32TcSNP242 33TcSNP230 34TcSNP226 35TcSNP193
36TcSNP151 37TcSNP150 38TcSNP144 39TcSNP32 40TcSNP25