SNP Profiles of SIAL 70   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
TTAAGGCCAACCTTCCTTAAAACCGGTT
1._GU_207_/H___
TTAAGGCCAACCTTCCTTAAAACCGGTT
2._GU_207_/H___
TTAAGGCCAACCTTCCTTAAAACCGGTT
3._GU_207_/H___
TTAAGGCCAACCTTCCTTAAAACCGGTT
4._GU_207_/H___
TTAAGGCCAACCTTCCTTAAAACCGGTT
5._GU_207_/H___
TTAAGGCCAACCTTCCTTAAAACCGGTT
6._GU_207_/H___
TTAAGGCCAACCTTCCTTAAAACCGGTT
7._GU_207_/H___
TTAAGGCCAACCTTCCTTAAAACCGGTT
8._GU_207_/H___
TTAAGGCCAACCTTCCTTAAAACCGGTT
9._GU_207_/H___
TTAAGGCCAACCTTCCTTAAAACCGGTT
10._GU_207_/H___
__GGGGCC____TT________CCGG__
11._GU_207_/H___
CCGGGGCCCCTTTTCCCCAAGGCCGGCC
12._GU_207_/H___
____GG______TT__CC__GG__GG__
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
AAGGTTCCGGGGGGTTAACCTTTTCCAA
1._GU_207_/H___
AAGGTTCCGGGGGGTTAACCTTTTCCAA
2._GU_207_/H___
AAGGTTCCGGGGGGTTAACCTTTTCCAA
3._GU_207_/H___
AAGGTTCCGGGGGGTTAACCTTTTCCAA
4._GU_207_/H___
AAGGTTCCGGGGGGTTAACCTTTTCCAA
5._GU_207_/H___
AAGGTTCCGGGGGGTTAACCTTTTCCAA
6._GU_207_/H___
AAGGTTCCGGGGGGTTAACCTTTTCCAA
7._GU_207_/H___
AAGGTTCCGGGGGGTTAACCTTTTCCAA
8._GU_207_/H___
AAGGTTCCGGGGGGTTAACCTTTTCCAA
9._GU_207_/H___
AAGGTTCCGGGGGGTTAACCTTTTCCAA
10._GU_207_/H___
______CCGGGG__CCCCCCGGCCAAGG
11._GU_207_/H___
AAGGCCCCGGGGAACCCCCCGGCCAAGG
12._GU_207_/H___
________GGGGAA__CCCC____AA__
 29 30 31 32 33 34 35 36 37 38     
_Input profile
GGAACCAACCAACCTTTTGGX_XX_XX_XX_X
1._GU_207_/H___
GGAACCAACCAACCTTTTGGX_XX_XX_XX_X
2._GU_207_/H___
GGAACCAACCAACCTTTTGGX_XX_XX_XX_X
3._GU_207_/H___
GGAACCAACCAACCTTTTGGX_XX_XX_XX_X
4._GU_207_/H___
GGAACCAACCAACCTTTTGGX_XX_XX_XX_X
5._GU_207_/H___
GGAACCAACCAACCTTTTGGX_XX_XX_XX_X
6._GU_207_/H___
GGAACCAACCAACCTTTTGGX_XX_XX_XX_X
7._GU_207_/H___
GGAACCAACCAACCTTTTGGX_XX_XX_XX_X
8._GU_207_/H___
GGAACCAACCAACCTTTTGGX_XX_XX_XX_X
9._GU_207_/H___
GGAACCAACC__CCTTTTGGX_XX_XX_XX_X
10._GU_207_/H___
__AACCGGCCAATTTT____X_XX_XX_XX_X
11._GU_207_/H___
AGAACCGGCCAATTGTTTGGX_XX_XX_XX_X
12._GU_207_/H___
______GG____________X_XX_XX_XX_X

Input profile: GU_207_/H

 
Mars Center for Cocoa Science, Brazil
Location: 1311 13
 Dapeng Zhang, 2016

1._GU_207_/H

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 6 > FP
 Dapeng Zhang, 2016

2._GU_207_/H

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 12 > F
 Dapeng Zhang, 2016

3._GU_207_/H

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 1 > FP
 Dapeng Zhang, 2016

4._GU_207_/H

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 11
 Dapeng Zhang, 2016

5._GU_207_/H

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 10
 Dapeng Zhang, 2016

6._GU_207_/H

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 9
 Dapeng Zhang, 2016

7._GU_207_/H

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 7
 Dapeng Zhang, 2016

8._GU_207_/H

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 4
 Dapeng Zhang, 2016

9._GU_207_/H

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1311 2
 Dapeng Zhang, 2016

10._GU_207_/H RUQ_225

60.9 %
23 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

11._GU_207_/H RUQ_225

52.6 %
38 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

12._GU_207_/H RUQ_225

50 %
12 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

 


  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1350
6TcSNP1270 7TcSNP1253 8TcSNP1165 9TcSNP1144 10TcSNP1075
11TcSNP1062 12TcSNP1060 13TcSNP998 14TcSNP994 15TcSNP953
16TcSNP929 17TcSNP917 18TcSNP891 19TcSNP872 20TcSNP723
21TcSNP645 22TcSNP619 23TcSNP591 24TcSNP577 25TcSNP560
26TcSNP534 27TcSNP529 28TcSNP469 29TcSNP429 30TcSNP372
31TcSNP242 32TcSNP230 33TcSNP226 34TcSNP193 35TcSNP151
36TcSNP150 37TcSNP32 38TcSNP25