SNP Profiles of ICS 40   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
CTAGCGCTTTAACCGTCTCTAAAACTAA
1._ICS_9___
CTAGCGCTTTAACCGTCTCTAAAACTAA
2._ICS_9___
CTAGCGCTTTAACCGTCTCTAAAACTAA
3._ICS_9___
CTAGCGCTTTAACCGTCTCTAAAACTAA
4._ICS_9___
CTAGCGCTTTAACCGTCTCTAAAACTAA
5._ICS_9___
CTAGCGCTTTAACCGTCTCTAAAACTAA
6._ICS_9___
CTAGCGCTTTAACCGTCTCTAAAACCAA
7._ICS_9___
CTAGCGCTTTAACCGTCTCTAAAACCAA
8._ICS_9___
CTAGCGCTTTAACCGTCTCTAAAACCAA
9._ICS_9___
CTAGCGCTTTAACCGTCTCTAAAACCAA
10._ICS_9___
__AGCGCTTTAACCGTCTCTAAAACCAA
11._ICS_9___
CTAGCGCTTTAA__GTCTCTAAAACCAA
12._ICS_9___
CTAGCGCTTTAA__GTCTCTAAAACCAA
13._ICS_9___
__AGCGCTTTAACCGTCTCTAAAACCAA
14._ICS_9___
CTAGGGCTCTAACCGTCTCTAAAACCAA
15._ICS_9___
CTAGGGCTCTAACCGTCTCTAAAACCAA
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
CTAAGGTTCCCGGTGGCTACCCGTCTCC
1._ICS_9___
CTAAGGTTCCCGGTGGCTACCCGTCTCC
2._ICS_9___
CTAAGGTTCCCGGTGGCTACCCGTCTCC
3._ICS_9___
CTAAGGTTCCCGGTGGCTACCCGTCTCC
4._ICS_9___
CTAAGGTTCC__GTGGCTACCCGTCTCC
5._ICS_9___
CTAAGGTTCC__GTGGCTACCCGTCTCC
6._ICS_9___
CTAAGGTTCCGGGTGGTTCCCCTTCCCC
7._ICS_9___
CTAAGGTTCCGGGTGGTTCCCCTTCCCC
8._ICS_9___
CTAAGGTTCCGGGTGGTTCCCCTTCCCC
9._ICS_9___
CTAAGGTTCCGGGTGGTTCCCCTTCCCC
10._ICS_9___
CTAAGGTTCCGGGTGGTTCCCCTTCCCC
11._ICS_9___
CTAAGGTTCCGGGTGGTTCCCCTTCCCC
12._ICS_9___
CTAAGGTTCCGGGTGGTTCCCCTTCCCC
13._ICS_9___
CTAAGGTTCCGGGTGGTTCCCCTTCCCC
14._ICS_9___
CTAAGGTTCCGGGTAATTCCCCTTCCCC
15._ICS_9___
CTAAGGTTCCGGGTAATTCCCCTTCCCC
 29 30 31 32 33 34 35 36 37 38 39 40   
_Input profile
AGGGATCTAGCGACCTGTACATGGX_XX_X
1._ICS_9___
AGGGATCTAGCGACCTGTACATGGX_XX_X
2._ICS_9___
AGGGATCTAGCGACCTGTACATGGX_XX_X
3._ICS_9___
AGGGATCTAGCGACCTGTACATGGX_XX_X
4._ICS_9___
AGGGATCTAGCGACCTGTACATGGX_XX_X
5._ICS_9___
AGGGATCTAGCGACCTGTACATGGX_XX_X
6._ICS_9___
GGGGATCTAGGGACCTTTCCATGGX_XX_X
7._ICS_9___
GGGGATCTAGGGACCTTTCCATGGX_XX_X
8._ICS_9___
GGGGATCTAGGGACCTTTCCATGGX_XX_X
9._ICS_9___
GGGGATCTAGGGACCTTTCCATGGX_XX_X
10._ICS_9___
GGGGATCTAGGGACCTTTCCATGGX_XX_X
11._ICS_9___
GGGGATCTAGGGACCTTTCCATGGX_XX_X
12._ICS_9___
GGGGATCTAGGGACCTTTCCATGGX_XX_X
13._ICS_9___
GGGGATCTAGGGACCTTTCCATGGX_XX_X
14._ICS_9___
GGGGATCTAGGGACCTTTCCATGGX_XX_X
15._ICS_9___
GGGGATCTAGGGACCTTTCCATGGX_XX_X

Input profile: ICS_9

 
Mars Center for Cocoa Science, Brazil
Location: 8902 5
 Dapeng Zhang, 2016

1._ICS_9

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8902 3
 Dapeng Zhang, 2016

2._ICS_9 NA

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

3._ICS_9 NA

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

4._ICS_9

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8902 6
 Dapeng Zhang, 2016

5._ICS_9 NA

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

6._ICS_9

87.5 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8901 6
 Dapeng Zhang, 2016

7._ICS_9

87.5 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8901 1
 Dapeng Zhang, 2016

8._ICS_9 NA

87.5 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

9._ICS_9 NA

87.5 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

10._ICS_9

87.2 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8901 7
 Dapeng Zhang, 2016

11._ICS_9

87.2 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8901 4
 Dapeng Zhang, 2016

12._ICS_9 NA

87.2 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

13._ICS_9 NA

87.2 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

14._ICS_9

82.5 %
40 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: San Juan Block3
 Dapeng Zhang, 2016

15._ICS_9

82.5 %
40 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: San Juan Block3
 Dapeng Zhang, 2016

 


  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1350 7TcSNP1270 8TcSNP1253 9TcSNP1165 10TcSNP1144
11TcSNP1075 12TcSNP1062 13TcSNP1060 14TcSNP998 15TcSNP994
16TcSNP953 17TcSNP929 18TcSNP917 19TcSNP891 20TcSNP872
21TcSNP723 22TcSNP645 23TcSNP619 24TcSNP591 25TcSNP577
26TcSNP560 27TcSNP534 28TcSNP529 29TcSNP469 30TcSNP429
31TcSNP372 32TcSNP242 33TcSNP230 34TcSNP226 35TcSNP193
36TcSNP151 37TcSNP150 38TcSNP144 39TcSNP32 40TcSNP25