SNP Profiles of EET 233   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
CCAGCGTTCTCCTTTTCCCCAAGGCTAA
1._IMC_96___
CCAGCGTTCTCCTTTTCCCCAAGGCTAA
2._IMC_96___
CCAACGTTTTAATTGTCCCCAAGGCCGG
3._IMC_96___
CCAACGTTTTAATTGTCCCCAAGGCCGG
4._IMC_96___
CCAACGTTTTAATTGTCCCCAAGGCCGG
5._IMC_96___
CCAACGTTTTAATTGTCCCCAAGGCCGG
6._IMC_96___
CCAACGTTTTAATTGTCCCCAAGGCCGG
7._IMC_96___
CCAACGTTTTAATTGTCCCCAAGGCCGG
8._IMC_96___
CCAACGTTTTAATTGTCCCCAAGGCCGG
9._IMC_96___
CCAACGTTTTAATTGTCCCCAAGGCCGG
10._IMC_96___
CTAGGGCTTTAATTTTCCCTAAAACTAA
11._IMC_96___
CTAGGGCTTTAATTTTCCCTAAAACTAA
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
TTAAGGCCCTCCGGAACCGGGTCTCCAA
1._IMC_96___
TTAAGGCCCTCCGGAACCGGGTCTCCAA
2._IMC_96___
TTAAGGCTCTCCGGAACCGGGGCTCCAA
3._IMC_96___
TTAAGGCTCTCCGGAACCGGGGCTCCAA
4._IMC_96___
TTAAGGCTCTCCGGAACCGGGGCTCCAA
5._IMC_96___
TTAAGGCTCTCCGGAACCGGGGCTCCAA
6._IMC_96___
TTAAGGCTCTCCGGAACCGGGGCTCCAA
7._IMC_96___
TTAAGGCTCTCCGGAACCGGGGCTCCAA
8._IMC_96___
TTAAGGCT__CCGGAACCGGGGCTCCAA
9._IMC_96___
TTAAGGCT__CCGGAACCGGGGCTCCAA
10._IMC_96___
CTAACGCCCCGGGGAACTCCGTCCACAA
11._IMC_96___
CTAACGCCCCGGGGAACTCCGTCCACAA
 29 30 31 32 33 34 35 36 37 38     
_Input profile
GGAACTAGACCCGTCCTTGGX_XX_XX_XX_X
1._IMC_96___
GGAACTAGACCCGTCCTTGGX_XX_XX_XX_X
2._IMC_96___
GGAACCAGAACCGGACATGGX_XX_XX_XX_X
3._IMC_96___
GGAACCAGAACCGGACATGGX_XX_XX_XX_X
4._IMC_96___
GGAACCAGAACCGGACATGGX_XX_XX_XX_X
5._IMC_96___
GGAACCAGAACCGGACATGGX_XX_XX_XX_X
6._IMC_96___
GGAACCAGAACCGGACATGGX_XX_XX_XX_X
7._IMC_96___
GGAACCAGAACCGGACATGGX_XX_XX_XX_X
8._IMC_96___
GGAACCAGAACCGGACATGGX_XX_XX_XX_X
9._IMC_96___
GGAACCAGAACCGGACATGGX_XX_XX_XX_X
10._IMC_96___
GGAACTAAAACCGTCCATGGX_XX_XX_XX_X
11._IMC_96___
GGAACTAAAACCGTCCATGGX_XX_XX_XX_X

Input profile: IMC_96

 
International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: MARPER D562
 Dapeng Zhang, 2016

1._IMC_96

identical
38 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 6B A46 T2
 Dapeng Zhang, 2016

2._IMC_96

80.3 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8823 6
 Dapeng Zhang, 2016

3._IMC_96

80.3 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8823 5
 Dapeng Zhang, 2016

4._IMC_96

80.3 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8823 2
 Dapeng Zhang, 2016

5._IMC_96 GC-08-255-8-23

80.3 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

6._IMC_96 GC-08-255-8-23

80.3 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

7._IMC_96 GC-08-255-8-23

80.3 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

8._IMC_96

79.7 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8823 1
 Dapeng Zhang, 2016

9._IMC_96 GC-08-255-8-23

79.7 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

10._IMC_96

71.1 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8823 4
 Dapeng Zhang, 2016

11._IMC_96 GC-08-255-8-23

71.1 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1350 7TcSNP1270 8TcSNP1253 9TcSNP1165 10TcSNP1144
11TcSNP1075 12TcSNP1062 13TcSNP1060 14TcSNP998 15TcSNP994
16TcSNP953 17TcSNP929 18TcSNP917 19TcSNP891 20TcSNP872
21TcSNP723 22TcSNP645 23TcSNP619 24TcSNP577 25TcSNP560
26TcSNP534 27TcSNP529 28TcSNP469 29TcSNP429 30TcSNP372
31TcSNP242 32TcSNP230 33TcSNP193 34TcSNP151 35TcSNP150
36TcSNP144 37TcSNP32 38TcSNP25