SNP Profiles of ICS 95   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
GGATACGTCTACCGAGCTATGGAGCCCT
1._SC_1_[COL]___
GGATACGTCTACCGAGCTATGGAGCCCT
2._SC_1_[COL]___
GGATACGTCTACCGAGCTATGGAGCCCT
3._SC_1_[COL]___
GGATACGTCTACCGAGCTATGGAGCCCT
4._SC_1_[COL]___
GGATACGTCTACCGAGCTATGGAGCCCT
5._SC_1_[COL]___
GGATACGTCTACCGAGCTATGGAGCCCT
6._SC_1_[COL]___
GGATACGTCTACCGAGCTATGGAGCCCT
7._SC_1_[COL]___
GGATACGTCTACCGAGCTATGGAGCCCT
8._SC_1_[COL]___
GGATACGTCTACCGAGCTATGGAGCCCT
9._SC_1_[COL]___
GGATACGTCTACCGAGCTATGGAGCCCT
10._SC_1_[COL]___
GGATACGTCTACCGAGCTATGGAGCCCT
11._SC_1_[COL]___
GGATACGTCTACCGAGCTATGGAGCCCT
12._SC_1_[COL]___
GGATACGTCTACCGAGCTATGGAGCCCT
13._SC_1_[COL]___
GGATACGTCTACCGAGCTATGGAGCCCT
14._SC_1_[COL]___
GGATACGTCTACCGAGCTATGGAGCCCT
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
GTCGCCCTAGGTGGCCTTGGAACTAACT
1._SC_1_[COL]___
GTCGCCCTAGGTGGCCTTGGAACTAACT
2._SC_1_[COL]___
GTCGCCCTAGGTGGCCTTGGAACTAACT
3._SC_1_[COL]___
GTCGCCCTGGGTGGCCTTGGAACTAACT
4._SC_1_[COL]___
GTCGCCCTGGGTGGCCTTGGAACTAACT
5._SC_1_[COL]___
GTCGCCCTGGGTGGCCTTGGAACTAACT
6._SC_1_[COL]___
GTCGCCCTGGGTGGCCTTGGAACTAACT
7._SC_1_[COL]___
GTCGCCCTGGGTGGCCTTGGAACTAACT
8._SC_1_[COL]___
GTCGCCCTGGGTGGCCTTGGAACTAACT
9._SC_1_[COL]___
GTCGCCCTGGGTGGCCTTGGAACTAACT
10._SC_1_[COL]___
GTCGCCCTGGGTGGCCTTGGAACTAACT
11._SC_1_[COL]___
GTCGCCCTGGGTGGCCTTGGAACTAACT
12._SC_1_[COL]___
GTCGCCCTGGGTGGCCTTGGAACTAACT
13._SC_1_[COL]___
GTCGCCCTGGGTGGCCTTGGAACTAACT
14._SC_1_[COL]___
GTCGCCCTGGGTGGCCTTGGAACTAACT
 29 30 31 32 33 34 35 36 37 38 39 40   
_Input profile
AAAACTCTGTCCAATTCTGGAGCTX_XX_X
1._SC_1_[COL]___
AAAACTCTGTCCAATTCTGGAGCTX_XX_X
2._SC_1_[COL]___
AAAACTCTGTCCAATTCT__AGCTX_XX_X
3._SC_1_[COL]___
AAAACTCTGTCCAATTCTCGAGCTX_XX_X
4._SC_1_[COL]___
AAAACTCTGTCCAATTCTCGAGCTX_XX_X
5._SC_1_[COL]___
AAAACTCTGTCCAATTCTCGAGCTX_XX_X
6._SC_1_[COL]___
AAAACTCTGTCCAATTCTCGAGCTX_XX_X
7._SC_1_[COL]___
AAAACTCTGTCCAATTCTCGAGCTX_XX_X
8._SC_1_[COL]___
AAAACTCTGTCCAATTCTCGAGCTX_XX_X
9._SC_1_[COL]___
AAAACTCTGTCCAATTCTCGAGCTX_XX_X
10._SC_1_[COL]___
AAAACTCTGTCCAATTCTCGAGCTX_XX_X
11._SC_1_[COL]___
AAAACTCTGTCCAATTCTCGAGCTX_XX_X
12._SC_1_[COL]___
AAAACTCTGTCCAATTCTCGAGCTX_XX_X
13._SC_1_[COL]___
AAAACTCTGTCCAATTCTCGAGCTX_XX_X
14._SC_1_[COL]___
AAAACTCTGTCCAATTCTCGAGCTX_XX_X

Input profile: SC_1_[COL]

 
International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 4A C274 T1
 Dapeng Zhang, 2016

1._SC_1_[COL]

identical
40 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 4A C319 T2
 Dapeng Zhang, 2016

2._SC_1_[COL] RUQ_41

identical
39 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

3._SC_1_[COL]

97.5 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1616 4
 Dapeng Zhang, 2016

4._SC_1_[COL]

97.5 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1616 5
 Dapeng Zhang, 2016

5._SC_1_[COL]

97.5 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1616 12
 Dapeng Zhang, 2016

6._SC_1_[COL]

97.5 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1616 13
 Dapeng Zhang, 2016

7._SC_1_[COL]

97.5 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1616 2 > FP
 Dapeng Zhang, 2016

8._SC_1_[COL]

97.5 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1616 9 > FP
 Dapeng Zhang, 2016

9._SC_1_[COL] GC-01-119-6-16

97.5 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP2
 Mars, 2018

10._SC_1_[COL] GC-01-119-6-16

97.5 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

11._SC_1_[COL] GC-01-119-6-16

97.5 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

12._SC_1_[COL] GC-01-119-6-16

97.5 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9 > FP1
 Mars, 2018

13._SC_1_[COL] GC-01-119-6-16

97.5 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

14._SC_1_[COL] GC-01-119-6-16

97.5 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

 


  Key to SNP Markers

1TcSNP25 2TcSNP32 3TcSNP144 4TcSNP150 5TcSNP151
6TcSNP193 7TcSNP226 8TcSNP230 9TcSNP242 10TcSNP372
11TcSNP429 12TcSNP469 13TcSNP529 14TcSNP534 15TcSNP560
16TcSNP577 17TcSNP591 18TcSNP619 19TcSNP645 20TcSNP723
21TcSNP872 22TcSNP891 23TcSNP917 24TcSNP929 25TcSNP953
26TcSNP994 27TcSNP998 28TcSNP1060 29TcSNP1062 30TcSNP1075
31TcSNP1144 32TcSNP1165 33TcSNP1253 34TcSNP1270 35TcSNP1350
36TcSNP1414 37TcSNP1442 38TcSNP1458 39TcSNP1484 40TcSNP1520