SNP Profiles of CATONGO   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
GGTTACTTCCAACCAACCAAGGAACCTT
1._SIAL_169___
GGTTACTTCCAACCAACCAAGGAACCTT
2._SIAL_169___
GGTTACTTCCAACCAACCAAGGAACCTT
3._SIAL_169___
GGTTACTTCCAACCAACCAAGGAACCTT
4._SIAL_169___
GGTTACTTCCAACCAACCAAGGAACCTT
5._SIAL_169___
GGTTACTTCCAACCAACCAAGGAACCTT
6._SIAL_169___
GGTTACTTCCAACCAACCAAGGAACCTT
7._SIAL_169___
GGTTACTTCCAACCAACCAAGGAACCTT
8._SIAL_169___
GGTTACTTCCAACCAACCAAGGAACCTT
9._SIAL_169___
GGTTACTTCCAACCAACCAAGGAACCTT
10._SIAL_169___
GGTTACTTCCAACCAACCAAGGAACCTT
11._SIAL_169___
GGTTACTTCCAACCAACCAAGGAACCTT
12._SIAL_169___
GGTTACTTCCAACCAACCAAGGAACCTT
13._SIAL_169___
GGTTACTTCCAACCAACCAAGGAACCTT
14._SIAL_169___
GG__ACTTCCAACCAACCAAGGAACCTT
15._SIAL_169___
GG__ACTTCCAACCAACCAAGGAACCTT
16._SIAL_169___
GGTTAATTCCAACCAACCAAGGAACCCT
17._SIAL_169___
GG__ACAAGGAAGGAAGGAAGG__CC__
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
TTCGACTTGGGGGGCCTTCGAATTGGCC
1._SIAL_169___
TTCGACTTGGGGGGCCTTCGAATTGGCC
2._SIAL_169___
TTCGACTTGGGGGGCCTTCGAATTGGCC
3._SIAL_169___
TTCGACTTGGGGGGCCTTCGAATTGGCC
4._SIAL_169___
TTCGACTTGGGGGGCCTTCGAATTGGCC
5._SIAL_169___
TTCGACTTGGGGGGCCTTCGAATTGGCC
6._SIAL_169___
TTCGACTTGGGGGGCCTTCGAATTGGCC
7._SIAL_169___
TTCGACTTGGGGGGCCTTCGAATTGGCC
8._SIAL_169___
TTCGACTTGGGGGGCCTTCGAATTGGCC
9._SIAL_169___
TTCGACTTGGGGGGCCTTCGAATTGGCC
10._SIAL_169___
TTCGACTTGGGGGGCCTTCGAATTGGCC
11._SIAL_169___
TTCGACTTGGGGGGCCTTCGAATTGGCC
12._SIAL_169___
TTCGACTTGGGGGGCCTTCGAATTGGCC
13._SIAL_169___
TTCGACTTGGGGGGCCTTCGAATTGGCC
14._SIAL_169___
TTCGAC__GGGGGGCCTTCGAATTGGCC
15._SIAL_169___
TTCGAC__GGGGGGCCTTCGAATTGGCC
16._SIAL_169___
TTGGAATTAAGGGGCCTTGGAATTGGCC
17._SIAL_169___
AACGACAA__CCCCGGAACGAAAAGGGG
 29 30 31 32 33 34 35 36 37 38 39 40   
_Input profile
AAAACTCCTTCCAATTCCGGAGTTX_XX_X
1._SIAL_169___
AAAACTCCTTCCAATTCCGGAGTTX_XX_X
2._SIAL_169___
AAAACTCCTTCCAATTCCGGAGTTX_XX_X
3._SIAL_169___
AAAACTCCTTCCAATTCCGGAGTTX_XX_X
4._SIAL_169___
AAAACTCCTTCCAATTCCGGAGTTX_XX_X
5._SIAL_169___
AAAACTCCTTCCAATTCCGGAGTTX_XX_X
6._SIAL_169___
AAAACTCCTTCCAATTCCGGAGTTX_XX_X
7._SIAL_169___
AAAACTCCTTCCAATTCCGGAGTTX_XX_X
8._SIAL_169___
AAAACTCCTTCCAATTCCGGAGTTX_XX_X
9._SIAL_169___
AAAACTCCTTCCAATTCCGGAGTTX_XX_X
10._SIAL_169___
AAAACTCCTTCCAATTCCGGAGTTX_XX_X
11._SIAL_169___
AAAACTCCTTCCAATTCCGGAGTTX_XX_X
12._SIAL_169___
AAAACTCCTTCCAATTCCGGAGTTX_XX_X
13._SIAL_169___
AAAACTCCTTCCAATTCCGGAGTTX_XX_X
14._SIAL_169___
AAAACTCCTTCCAATTCCGGAGTTX_XX_X
15._SIAL_169___
AAAACTCCTTCCAATTCCGGAGTTX_XX_X
16._SIAL_169___
AAAATTCCTTCCAATTTTGGAGTTX_XX_X
17._SIAL_169___
AAAA____AAGGAAAAGGCCAGAAX_XX_X

Input profile: SIAL_169

 
Mars Center for Cocoa Science, Brazil
Location: 1214 4
 Dapeng Zhang, 2016

1._SIAL_169 GC-01-041-2-18

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13 > FP3
 Mars, 2018

2._SIAL_169 GC-01-041-2-18

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12 > FP2
 Mars, 2018

3._SIAL_169 GC-01-041-2-18

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

4._SIAL_169 GC-01-041-2-18

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8 > FP4
 Mars, 2018

5._SIAL_169 GC-01-041-2-18

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

6._SIAL_169 GC-01-041-2-18

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

7._SIAL_169 GC-01-041-2-18

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP1
 Mars, 2018

8._SIAL_169

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1214 8 > FP
 Dapeng Zhang, 2016

9._SIAL_169

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1214 2 > FP
 Dapeng Zhang, 2016

10._SIAL_169

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1214 13 > F
 Dapeng Zhang, 2016

11._SIAL_169

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1214 12 > F
 Dapeng Zhang, 2016

12._SIAL_169

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1214 10
 Dapeng Zhang, 2016

13._SIAL_169

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1214 6
 Dapeng Zhang, 2016

14._SIAL_169 GC-01-041-2-18

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

15._SIAL_169

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1214 9
 Dapeng Zhang, 2016

16._SIAL_169

87.5 %
40 shared markers

Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica
Location: Cabiria
 Dapeng Zhang, 2016

17._SIAL_169 GC-01-41-2-18

47.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 2, Rep: 14, Tree: 4
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

 


  Key to SNP Markers

1TcSNP25 2TcSNP32 3TcSNP144 4TcSNP150 5TcSNP151
6TcSNP193 7TcSNP226 8TcSNP230 9TcSNP242 10TcSNP372
11TcSNP429 12TcSNP469 13TcSNP529 14TcSNP534 15TcSNP560
16TcSNP577 17TcSNP591 18TcSNP619 19TcSNP645 20TcSNP723
21TcSNP872 22TcSNP891 23TcSNP917 24TcSNP929 25TcSNP953
26TcSNP994 27TcSNP998 28TcSNP1060 29TcSNP1062 30TcSNP1075
31TcSNP1144 32TcSNP1165 33TcSNP1253 34TcSNP1270 35TcSNP1350
36TcSNP1414 37TcSNP1442 38TcSNP1458 39TcSNP1484 40TcSNP1520