SNP Profiles of UF 677 View Data

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	GG	AT	AC	GT	CT	AC	AG	CT	AT	GG	CC	CT	CC	AC
1._UF_677	GG	AT	AC	GT	CT	AC	AG	CT	AT	GG	CC	CT	CC	AC
2._UF_677	GG	AT	AC	GT	CT	AC	AG	CT	AT	GG	CC	CT	CC	AC
3._UF_677	GG	AT	AC	GT	CT	AC	AG	CT	AT	GG	CC	CT	CC	AC
4._UF_677	GG	AT	AC	GT	CT	AC	AG	CT	AT	GG	CC	CT	CC	AC
5._UF_677	GG	AT	AC	GT	CT	AC	AG	CT	AT	GG	CC	CT	CC	AC
6._UF_677	GG	AT	AC	GT	CT	AC	AG	CT	AT	GG	CC	CT	CC	AC
7._GC-01-027-2-04	GG	AT	AC	GT	CT	AC	AG	CT	AT	GG	CC	CT	CC	AC
8._GC-01-027-2-04	GG	AT	AC	GT	CT	AC	AG	CT	AT	GG	CC	CT	CC	AC
9._GC-01-027-2-04	GG	AT	AC	GT	CT	AC	AG	CT	AT	GG	CC	CT	CC	AC
10._GC-01-027-2-04	GG	AT	AC	GT	CT	AC	AG	CT	AT	GG	CC	CT	CC	AC
11._GC-01-027-2-04	GG	AT	AC	GT	CT	AC	AG	CT	AT	GG	CC	CT	CC	AC
12._UF_677	GG	AT	AC	GT	CT	AC	AG	CT	AT	GG	CC	CT	CC	AC
13._GC-01-027-2-04	GG	AT	AC	GT	CT	AC	AG	CT	AT	GG	CC	CT	CC	AC

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	CT	AG	GT	CG	CC	TT	GG	CT	AA	AA	CT	GT	CC	AA
1._UF_677	CT	AG	GT	CG	CC	TT	GG	CT	AA	AA	CT	GT	CC	AA
2._UF_677	CT	GG	GT	CG	CC	TT	GG	CT	AA	AA	CT	GT	CC	AA
3._UF_677	CT	GG	GT	CG	CC	TT	GG	CT	AA	AA	CT	GT	CC	AA
4._UF_677	CT	GG	GT	CG	CC	TT	GG	CT	AA	AA	CT	GT	CC	AA
5._UF_677	CT	GG	GT	CG	CC	TT	GG	CT	AA	AA	CT	GT	CC	AA
6._UF_677	CT	GG	GT	CG	CC	TT	GG	CT	AA	AA	CT	GT	CC	AA
7._GC-01-027-2-04	CT	GG	GT	CG	CC	TT	GG	CT	AA	AA	CT	GT	CC	AA
8._GC-01-027-2-04	CT	GG	GT	CG	CC	TT	GG	CT	AA	AA	CT	GT	CC	AA
9._GC-01-027-2-04	CT	GG	GT	CG	CC	TT	GG	CT	AA	AA	CT	GT	CC	AA
10._GC-01-027-2-04	CT	GG	GT	CG	CC	TT	GG	CT	AA	AA	CT	GT	CC	AA
11._GC-01-027-2-04	CT	GG	GT	CG	CC	TT	GG	CT	AA	AA	CT	GT	CC	AA
12._UF_677	CT	GG	GT	CG	CC	TT	GG	CT	AA	AA	CT	GT	CC	__
13._GC-01-027-2-04	CT	GG	GT	CG	CC	TT	GG	CT	AA	AA	CT	GT	CC	__

	29	30	31	32
_Input profile	TT	CT	CG	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
1._UF_677	TT	CT	CG	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
2._UF_677	TT	CT	CG	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
3._UF_677	TT	CT	CG	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
4._UF_677	TT	CT	CG	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
5._UF_677	TT	CT	CG	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
6._UF_677	TT	CT	CG	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
7._GC-01-027-2-04	TT	CT	CG	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
8._GC-01-027-2-04	TT	CT	CG	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
9._GC-01-027-2-04	TT	CT	CG	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
10._GC-01-027-2-04	TT	CT	CG	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
11._GC-01-027-2-04	TT	CT	CG	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
12._UF_677	TT	CT	CG	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
13._GC-01-027-2-04	TT	CT	CG	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X

Input profile: UF_677

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Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica

Location: Cabiria

Dapeng Zhang, 2016

1._UF_677

identical
32 shared markers

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Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica

Location: La Montaña Row 43 7_9

Dapeng Zhang, 2016

2._UF_677

98.4 %
32 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 1204 3

Dapeng Zhang, 2016

3._UF_677

98.4 %
32 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 1204 5

Dapeng Zhang, 2016

4._UF_677

98.4 %
32 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 1204 10

Dapeng Zhang, 2016

5._UF_677

98.4 %
32 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 1204 11

Dapeng Zhang, 2016

6._UF_677

98.4 %
32 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 1204 6 > FP

Dapeng Zhang, 2016

7._UF_677 GC-01-027-2-04

98.4 %
32 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3

8._UF_677 GC-01-027-2-04

98.4 %
32 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 5

Notes: 5

9._UF_677 GC-01-027-2-04

98.4 %
32 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 6

Notes: 6 > FP4

10._UF_677 GC-01-027-2-04

98.4 %
32 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 10

Notes: 10

11._UF_677 GC-01-027-2-04

98.4 %
32 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 11

Notes: 11

12._UF_677

98.4 %
31 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 1204 13 > F

Dapeng Zhang, 2016

13._UF_677 GC-01-027-2-04

98.4 %
31 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 13

Notes: 13 > FP2

Key to SNP Markers

Key to SNP Markers

1	TcSNP25	2	TcSNP32	3	TcSNP144	4	TcSNP150	5	TcSNP151
6	TcSNP193	7	TcSNP230	8	TcSNP242	9	TcSNP372	10	TcSNP429
11	TcSNP529	12	TcSNP534	13	TcSNP577	14	TcSNP591	15	TcSNP619
16	TcSNP645	17	TcSNP723	18	TcSNP872	19	TcSNP891	20	TcSNP917
21	TcSNP929	22	TcSNP994	23	TcSNP1062	24	TcSNP1075	25	TcSNP1165
26	TcSNP1253	27	TcSNP1270	28	TcSNP1350	29	TcSNP1414	30	TcSNP1442
31	TcSNP1458	32	TcSNP1484