SNP Profiles of BE 10   View Data

 Show/Hide Profiles

 Key

 1234567891011121314
_Input profile
TTAAGGCCCCTTCCTTAAAACCGGTTAA
1._BE_10
TTAAGGCCCCTTCCTTAAAACCGGTTAA
2._GC-08-090-2-13
TTAAGGCCCCTTCCTTAAAACCGGTTAA
3._GC-08-090-2-13
TTAAGGCCCCTTCCTTAAAACCGGTTAA
4._GC-08-090-2-13
TTAAGGCCCCTTCCTTAAAACCGGTTAA
5._GC-08-090-2-13
TTAAGGCCCCTTCCTTAAAACCGGTTAA
6._GC-08-090-2-13
TTAAGGCCCCTTCCTTAAAACCGGTTAA
7._GC-08-090-2-13
TTAAGGCCCCTTCCTTAAAACCGGTTAA
8._GC-08-090-2-13
TTAAGGCCCCTTCCTTAAAACCGGTTAA
9._GC-08-090-2-13
TTAAGGCCCCTTCCTTAAAACCGGTTAA
10._GC-08-090-2-13
TTAAGGCCCCTTCCTTAAAACCGGTTAA
11._GC-08-090-2-13
TTAAGGCCCCTTCCTTAAAACCGGTTAA
12._BE_10
TTAAGGCCCCTTCCTTAAAACCGGTTAA
13._BE_10
TTAAGGCCCCTTCCTTAAAACCGGTTAA
14._BE_10
TTAAGGCCCCTTCCTTAAAACCGGTTAA
15._BE_10
TTAAGGCCCCTTCCTTAAAACCGGTTAA
16._BE_10
TTAAGGCCCCTTCCTTAAAACCGGTTAA
17._BE_10
TTAAGGCCCCTTCCTTAAAACCGGTTAA
18._BE_10
TTAAGGCCCCTTCCTTAAAACCGGTTAA
19._BE_10
TTAAGGCCCCTTCCTTAAAACCGGTTAA
20._BE_10
TTAAGGCCCCTTCCTTAAAACCGGTTAA
21._GC-08-090-2-13
TTAAGGCCCCTTCCTTAAAACCGGTTAA
22._GC-08-090-2-13
TTAAGGCCCC__CCTTAAAACCGGTTAA
23._BE_10
TTAAGGCCCC__CCTTAAAACCGGTTAA
24._BE_10
TTAAGGCCCCTTCCTTAAAACCGGTTAA
25._GC-08-90-2-13
AAAACCGGGGAA____AAAAGGGGAAAA
 1516171819202122232425262728
_Input profile
CCGGGGAATTAACCTTTTAAGGAAAACC
1._BE_10
CCGGGGGGTTAACCTTTTAAGGAAAACC
2._GC-08-090-2-13
CCGGGGGGTTAACCTTTTAAGGAAAACC
3._GC-08-090-2-13
CCGGGGGGTTAACCTTTTAAGGAAAACC
4._GC-08-090-2-13
CCGGGGGGTTAACCTTTTAAGGAAAACC
5._GC-08-090-2-13
CCGGGGGGTTAACCTTTTAAGGAAAACC
6._GC-08-090-2-13
CCGGGGGGTTAACCTTTTAAGGAAAACC
7._GC-08-090-2-13
CCGGGGGGTTAACCTTTTAAGGAAAACC
8._GC-08-090-2-13
CCGGGGGGTTAACCTTTTAAGGAAAACC
9._GC-08-090-2-13
CCGGGGGGTTAACCTTTTAAGGAAAACC
10._GC-08-090-2-13
CCGGGGGGTTAACCTTTTAAGGAAAACC
11._GC-08-090-2-13
CCGGGGGGTTAACCTTTTAAGGAAAACC
12._BE_10
CCGGGGGGTTAACCTTTTAAGGAAAACC
13._BE_10
CCGGGGGGTTAACCTTTTAAGGAAAACC
14._BE_10
CCGGGGGGTTAACCTTTTAAGGAAAACC
15._BE_10
CCGGGGGGTTAACCTTTTAAGGAAAACC
16._BE_10
CCGGGGGGTTAACCTTTTAAGGAAAACC
17._BE_10
CCGGGGGGTTAACCTTTTAAGGAAAACC
18._BE_10
CCGGGGGGTTAACCTTTTAAGGAAAACC
19._BE_10
CCGGGGGGTTAACCTTTTAAGGAAAACC
20._BE_10
CCGGGGGGTTAACCTTTTAAGGAAAACC
21._GC-08-090-2-13
CCGGGGGGTTAACCTTTTAAGGAAAACC
22._GC-08-090-2-13
CCGGGGGGTTAACCTTTTAAGGAAAACC
23._BE_10
CCGGGGGGTTAACCTTTTAAGGAAAACC
24._BE_10
CCGGGGGGTTAACCTTTTAAGGAAAACC
25._GC-08-90-2-13
GGCCCC__AAAACCAA____GGAAAAGG
 293031323334        
_Input profile
AACCTTCCTTGGX_XX_XX_XX_XX_XX_XX_XX_X
1._BE_10
AACCTTCCTTGGX_XX_XX_XX_XX_XX_XX_XX_X
2._GC-08-090-2-13
AACCTTCCTTGGX_XX_XX_XX_XX_XX_XX_XX_X
3._GC-08-090-2-13
AACCTTCCTTGGX_XX_XX_XX_XX_XX_XX_XX_X
4._GC-08-090-2-13
AACCTTCCTTGGX_XX_XX_XX_XX_XX_XX_XX_X
5._GC-08-090-2-13
AACCTTCCTTGGX_XX_XX_XX_XX_XX_XX_XX_X
6._GC-08-090-2-13
AACCTTCCTTGGX_XX_XX_XX_XX_XX_XX_XX_X
7._GC-08-090-2-13
AACCTTCCTTGGX_XX_XX_XX_XX_XX_XX_XX_X
8._GC-08-090-2-13
AACCTTCCTTGGX_XX_XX_XX_XX_XX_XX_XX_X
9._GC-08-090-2-13
AACCTTCCTTGGX_XX_XX_XX_XX_XX_XX_XX_X
10._GC-08-090-2-13
AACCTTCCTTGGX_XX_XX_XX_XX_XX_XX_XX_X
11._GC-08-090-2-13
AACCTTCCTTGGX_XX_XX_XX_XX_XX_XX_XX_X
12._BE_10
AACCTTCCTTGGX_XX_XX_XX_XX_XX_XX_XX_X
13._BE_10
AACCTTCCTTGGX_XX_XX_XX_XX_XX_XX_XX_X
14._BE_10
AACCTTCCTTGGX_XX_XX_XX_XX_XX_XX_XX_X
15._BE_10
AACCTTCCTTGGX_XX_XX_XX_XX_XX_XX_XX_X
16._BE_10
AACCTTCCTTGGX_XX_XX_XX_XX_XX_XX_XX_X
17._BE_10
AACCTTCCTTGGX_XX_XX_XX_XX_XX_XX_XX_X
18._BE_10
AACCTTCCTTGGX_XX_XX_XX_XX_XX_XX_XX_X
19._BE_10
AACCTTCCTTGGX_XX_XX_XX_XX_XX_XX_XX_X
20._BE_10
AACCTTCCTTGGX_XX_XX_XX_XX_XX_XX_XX_X
21._GC-08-090-2-13
AA__TTCCTTGGX_XX_XX_XX_XX_XX_XX_XX_X
22._GC-08-090-2-13
AACCTTCCTTGGX_XX_XX_XX_XX_XX_XX_XX_X
23._BE_10
AACCTTCCTTGGX_XX_XX_XX_XX_XX_XX_XX_X
24._BE_10
AA__TTCCTTGGX_XX_XX_XX_XX_XX_XX_XX_X
25._GC-08-90-2-13
AAGGAACCTTGGX_XX_XX_XX_XX_XX_XX_XX_X

Input profile: BE_10

 
International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 5A N3/467 T1
 Dapeng Zhang, 2016

1._BE_10

97.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8213 6
 Dapeng Zhang, 2016

2._BE_10 GC-08-090-2-13

97.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14
 Mars, 2018

3._BE_10 GC-08-090-2-13

97.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

4._BE_10 GC-08-090-2-13

97.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

5._BE_10 GC-08-090-2-13

97.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

6._BE_10 GC-08-090-2-13

97.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

7._BE_10 GC-08-090-2-13

97.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

8._BE_10 GC-08-090-2-13

97.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

9._BE_10 GC-08-090-2-13

97.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

10._BE_10 GC-08-090-2-13

97.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4 > FP3
 Mars, 2018

11._BE_10 GC-08-090-2-13

97.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

12._BE_10

97.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8213 5
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016

13._BE_10

97.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8213 7
 Dapeng Zhang, 2016

14._BE_10

97.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8213 8
 Dapeng Zhang, 2016

15._BE_10

97.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8213 9
 Dapeng Zhang, 2016

16._BE_10

97.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8213 11
 Dapeng Zhang, 2016

17._BE_10

97.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8213 13
 Dapeng Zhang, 2016

18._BE_10

97.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8213 14
 Dapeng Zhang, 2016

19._BE_10

97.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8213 1 > FP
 Dapeng Zhang, 2016

20._BE_10

97.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8213 4 > FP
 Dapeng Zhang, 2016

21._BE_10 GC-08-090-2-13

97 %
33 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP4
 Mars, 2018

22._BE_10 GC-08-090-2-13

97 %
33 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP2
 Mars, 2018

23._BE_10

97 %
33 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8213 2 > FP
 Dapeng Zhang, 2016

24._BE_10

97 %
33 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8213 3 > FP
 Dapeng Zhang, 2016

25._BE_10 GC-08-90-2-13

48.3 %
29 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 5
Notes: MCCS_Structure_refs_above_0.9membership - Sample
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1270
6TcSNP1253 7TcSNP1165 8TcSNP1144 9TcSNP1075 10TcSNP1062
11TcSNP1060 12TcSNP998 13TcSNP994 14TcSNP953 15TcSNP891
16TcSNP872 17TcSNP723 18TcSNP645 19TcSNP619 20TcSNP591
21TcSNP577 22TcSNP560 23TcSNP534 24TcSNP469 25TcSNP429
26TcSNP372 27TcSNP230 28TcSNP226 29TcSNP193 30TcSNP151
31TcSNP150 32TcSNP144 33TcSNP32 34TcSNP25