SNP Profiles of JA 9 /37 [POU]   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
TTGGGGCCTTAACCCCTTAAAACCGGTT
1._CATONGO___
TTGGGGCCTTAACCCCTTAAAACCGGTT
2._CATONGO___
TTGGGGCCTTAACCCCTTAAAACCGGTT
3._CATONGO___
TTGGGGCCTTAACCCCTTAAAACCGGTT
4._CATONGO___
TTGGGGCCTTAACCCCTTAAAACCGGTT
5._CATONGO___
TTGGGGCCTTAACCCCTTAAAACCGGTT
6._CATONGO___
TTGGGGCCTTAACCCCTTAAAACCGGTT
7._CATONGO___
TTGGGGCCTTAACCCCTTAAAACCGGTT
8._CATONGO___
TTGGGGCCTTAACCCCTTAAAACCGGTT
9._CATONGO___
TTGGGGCCTTAACCCCTTAAAACCGGTT
10._CATONGO___
TTGGGGCCTTAACCCCTTAAAACCGGTT
11._CATONGO___
TTGGGGCCTTAACCCCTTAAAACCGGTT
12._CATONGO___
TTGGGGCCTTAACCCCTTAAAACCGGTT
13._CATONGO___
TTGGGGTTTTAACCCCTTAAAACCGGTT
14._CATONGO___
TTGGGGTTTTAACCCCTTAAAACCGGTT
15._CATONGO___
TTGGGGTTTTAACCCCTTAAAACCGGTT
16._CATONGO___
TTGGGGTTTTAACCCCTTAAAACCGGTT
17._CATONGO___
TTGGGGTTTTAACCCCTTAAAACCGGTT
18._CATONGO___
TTGGGGTTTTAACCCCTTAAAACCGGTT
19._CATONGO___
TTGGGGTTTTAACCCCTTAAAACCGGTT
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
AACCCCGGGGGGTTAACCTTTTCCAAGG
1._CATONGO___
AACCCCGGGGGGTTAACCTTTTCCAAGG
2._CATONGO___
AACCCCGGGGGGTTAACCTTTTCCAAGG
3._CATONGO___
AACCCCGGGGGGTTAACCTTTTCCAAGG
4._CATONGO___
AACCCCGGGGGGTTAACCTTTTCCAAGG
5._CATONGO___
AACCCCGGGGGGTTAACCTTTTCCAAGG
6._CATONGO___
AACCCCGGGGGGTTAACCTTTTCCAAGG
7._CATONGO___
AACCCCGGGGGGTTAACCTTTTCCAAGG
8._CATONGO___
AACCCCGGGGGGTTAACCTTTT__AAGG
9._CATONGO___
__CCCCGGGGGGTTAACCTTTTCCAAGG
10._CATONGO___
AACCCCGGGGGGTTAACCTTTT__AAGG
11._CATONGO___
AACCCCGGGGAATTAACCTTTTCCAAGG
12._CATONGO___
AACCCCGGGGAATTAACCTTTTCCAAGG
13._CATONGO___
AACCCCGGGGGGTTAACCTTTTCCAAGG
14._CATONGO___
AACCCCGGGGGGTTAACCTTTTCCAAGG
15._CATONGO___
AACCCCGGGGGGTTAACCTTTTCCAAGG
16._CATONGO___
AACCCCGGGGGGTTAACCTTTTCCAAGG
17._CATONGO___
AACCCCGGGGGGTTAACCTTTTCCAAGG
18._CATONGO___
AACCCCGGGGGGTTAACCTTTTCCAAGG
19._CATONGO___
AACCCCGGGGGGTTAACCTTTTCCAAGG
 29 30 31 32 33 34 35 36 37 38     
_Input profile
AACCAACCAACCTTAATTGGX_XX_XX_XX_X
1._CATONGO___
AACCAACCAACCTTAATTGGX_XX_XX_XX_X
2._CATONGO___
AACCAACCAACCTTAATTGGX_XX_XX_XX_X
3._CATONGO___
AACCAACCAACCTTAATTGGX_XX_XX_XX_X
4._CATONGO___
AACCAACCAACCTTAATTGGX_XX_XX_XX_X
5._CATONGO___
AACCAACCAACCTTAATTGGX_XX_XX_XX_X
6._CATONGO___
AACCAACCAACCTTAATTGGX_XX_XX_XX_X
7._CATONGO___
AACCAACCAACCTTAATTGGX_XX_XX_XX_X
8._CATONGO___
AACCAACCAACCTTAATTGGX_XX_XX_XX_X
9._CATONGO___
AACCAACCAACCTTAATTGGX_XX_XX_XX_X
10._CATONGO___
AACCAACCAACCTTAATTGGX_XX_XX_XX_X
11._CATONGO___
AACCAACCAACCTTAATTGGX_XX_XX_XX_X
12._CATONGO___
AACCAACCAACCTTAATTGGX_XX_XX_XX_X
13._CATONGO___
AACCAACCAACCTTACTTGGX_XX_XX_XX_X
14._CATONGO___
AACCAACCAACCTTACTTGGX_XX_XX_XX_X
15._CATONGO___
AACCAACCAACCTTACTTGGX_XX_XX_XX_X
16._CATONGO___
AACCAACCAACCTTACTTGGX_XX_XX_XX_X
17._CATONGO___
AACCAACCAACCTTACTTGGX_XX_XX_XX_X
18._CATONGO___
AACCAACCAACCTTACTTGGX_XX_XX_XX_X
19._CATONGO___
AACCAACCAACCTTACTTGGX_XX_XX_XX_X

Input profile: CATONGO

 
Mars Center for Cocoa Science, Brazil
Location: 8849 3
 Dapeng Zhang, 2016

1._CATONGO

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8308 3
 Dapeng Zhang, 2016

2._CATONGO

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8308 2 > FP
 Dapeng Zhang, 2016

3._CATONGO

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8849 5
 Dapeng Zhang, 2016

4._CATONGO

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8849 10
 Dapeng Zhang, 2016

5._CATONGO

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8849 2 > FP
 Dapeng Zhang, 2016

6._CATONGO

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8849 9 > FP
 Dapeng Zhang, 2016

7._CATONGO

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8308 1
 Dapeng Zhang, 2016

8._CATONGO

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8850 8
 Dapeng Zhang, 2016

9._CATONGO

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8849 6
 Dapeng Zhang, 2016

10._CATONGO

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8849 4 > FP
 Dapeng Zhang, 2016

11._CATONGO

97.4 %
38 shared markers

Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica
Location: Cabiria
 Dapeng Zhang, 2016

12._CATONGO

97.4 %
38 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 6B D254 T1
 Dapeng Zhang, 2016

13._CATONGO

96.1 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8849 7
 Dapeng Zhang, 2016

14._CATONGO

96.1 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8849 8 > FP
 Dapeng Zhang, 2016

15._CATONGO

96.1 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8850 1
 Dapeng Zhang, 2016

16._CATONGO

96.1 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8850 2
 Dapeng Zhang, 2016

17._CATONGO

96.1 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8850 4
 Dapeng Zhang, 2016

18._CATONGO

96.1 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8850 6
 Dapeng Zhang, 2016

19._CATONGO

96.1 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8850 7
 Dapeng Zhang, 2016

 


  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1350 7TcSNP1270 8TcSNP1165 9TcSNP1144 10TcSNP1075
11TcSNP1062 12TcSNP1060 13TcSNP998 14TcSNP994 15TcSNP953
16TcSNP929 17TcSNP891 18TcSNP872 19TcSNP723 20TcSNP645
21TcSNP619 22TcSNP591 23TcSNP577 24TcSNP560 25TcSNP534
26TcSNP529 27TcSNP469 28TcSNP429 29TcSNP372 30TcSNP242
31TcSNP230 32TcSNP226 33TcSNP193 34TcSNP151 35TcSNP150
36TcSNP144 37TcSNP32 38TcSNP25