SNP Profiles of JA 9 /37 [POU]   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
TTGGGGCCTTAACCTTCCTTAAAACCGG
1._CATONGO___
TTGGGGCCTTAACCTTCCTTAAAACCGG
2._CATONGO___
TTGGGGCCTTAACCTTCCTTAAAACCGG
3._CATONGO___
TTGGGGCCTTAACCTTCCTTAAAACCGG
4._CATONGO___
TTGGGGCCTTAACCTTCCTTAAAACCGG
5._CATONGO___
TTGGGGCCTTAACCTTCCTTAAAACCGG
6._CATONGO___
TTGGGGCCTTAACCTTCCTTAAAACCGG
7._CATONGO___
TTGGGGCCTTAACCTTCCTTAAAACCGG
8._CATONGO___
TTGGGGCCTTAACC__CCTTAAAACCGG
9._CATONGO___
TTGGGGCCTTAACC__CCTTAAAACCGG
10._CATONGO___
TTGGGGCCTTAACC__CCTTAAAACCGG
11._CATONGO___
TTGGGGCCTTAACCTTCCTTAAAACCGG
12._CATONGO___
TTGGGGCCTTAACCTTCCTTAAAACCGG
13._CATONGO___
TTGGGGTTTTAACCTTCCTTAAAACCGG
14._CATONGO___
TTGGGGTTTTAACCTTCCTTAAAACCGG
15._CATONGO___
TTGGGGTTTTAACCTTCCTTAAAACCGG
16._CATONGO___
TTGGGGTTTTAACCTTCCTTAAAACCGG
17._CATONGO___
TTGGGGTTTTAACCTTCCTTAAAACCGG
18._CATONGO___
TTGGGGTTTTAACCTTCCTTAAAACCGG
19._CATONGO___
TTGGGGTTTTAACCTTCCTTAAAACCGG
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
TTCCTTCCGGGGGGTTAACCTTTTCCAA
1._CATONGO___
TTCCTTCCGGGGGGTTAACCTTTTCCAA
2._CATONGO___
TTCCTTCCGGGGGGTTAACCTTTTCCAA
3._CATONGO___
TTCCTTCCGGGGGGTTAACCTTTTCCAA
4._CATONGO___
TTCCTTCCGGGGGGTTAACCTTTTCCAA
5._CATONGO___
TTCCTTCCGGGGGGTTAACCTTTTCCAA
6._CATONGO___
TTCCTTCCGGGGGGTTAACCTTTTCCAA
7._CATONGO___
TTCCTTCCGGGGGGTTAACCTTTT__AA
8._CATONGO___
TTCCTTCCGGGGGGTTAACCTTTTCCAA
9._CATONGO___
TTCC__CCGGGGGGTTAACCTTTTCCAA
10._CATONGO___
TTCCTTCCGGGGGGTTAACCTTTT__AA
11._CATONGO___
TTCCTTCCGGGGAATTAACCTTTTCCAA
12._CATONGO___
TTCCTTCCGGGGAATTAACCTTTTCCAA
13._CATONGO___
TTCCTTCCGGGGGGTTAACCTTTTCCAA
14._CATONGO___
TTCCTTCCGGGGGGTTAACCTTTTCCAA
15._CATONGO___
TTCCTTCCGGGGGGTTAACCTTTTCCAA
16._CATONGO___
TTCCTTCCGGGGGGTTAACCTTTTCCAA
17._CATONGO___
TTCCTTCCGGGGGGTTAACCTTTTCCAA
18._CATONGO___
TTCCTTCCGGGGGGTTAACCTTTTCCAA
19._CATONGO___
TTCCTTCCGGGGGGTTAACCTTTTCCAA
 29 30 31 32 33 34 35 36 37 38 39    
_Input profile
GGAACCAACCAACCTTAATTGGX_XX_XX_X
1._CATONGO___
GGAACCAACCAACCTTAATTGGX_XX_XX_X
2._CATONGO___
GGAACCAACCAACCTTAATTGGX_XX_XX_X
3._CATONGO___
GGAACCAACCAACCTTAATTGGX_XX_XX_X
4._CATONGO___
GGAACCAACCAACCTTAATTGGX_XX_XX_X
5._CATONGO___
GGAACCAACCAACCTTAATTGGX_XX_XX_X
6._CATONGO___
GGAACCAACCAACCTTAATTGGX_XX_XX_X
7._CATONGO___
GGAACCAACCAACCTTAATTGGX_XX_XX_X
8._CATONGO___
GGAACCAACCAACCTTAATTGGX_XX_XX_X
9._CATONGO___
GGAACCAACCAACCTTAATTGGX_XX_XX_X
10._CATONGO___
GGAACCAACCAACCTTAATTGGX_XX_XX_X
11._CATONGO___
GGAACCAACCAACCTTAATTGGX_XX_XX_X
12._CATONGO___
GGAACCAACCAACCTTAATTGGX_XX_XX_X
13._CATONGO___
GGAACCAACCAACCTTACTTGGX_XX_XX_X
14._CATONGO___
GGAACCAACCAACCTTACTTGGX_XX_XX_X
15._CATONGO___
GGAACCAACCAACCTTACTTGGX_XX_XX_X
16._CATONGO___
GGAACCAACCAACCTTACTTGGX_XX_XX_X
17._CATONGO___
GGAACCAACCAACCTTACTTGGX_XX_XX_X
18._CATONGO___
GGAACCAACCAACCTTACTTGGX_XX_XX_X
19._CATONGO___
GGAACCAACCAACCTTACTTGGX_XX_XX_X

Input profile: CATONGO

 
Mars Center for Cocoa Science, Brazil
Location: 8849 6
 Dapeng Zhang, 2016

1._CATONGO

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8308 3
 Dapeng Zhang, 2016

2._CATONGO

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8308 2 > FP
 Dapeng Zhang, 2016

3._CATONGO

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8849 5
 Dapeng Zhang, 2016

4._CATONGO

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8849 10
 Dapeng Zhang, 2016

5._CATONGO

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8849 9 > FP
 Dapeng Zhang, 2016

6._CATONGO

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8308 1
 Dapeng Zhang, 2016

7._CATONGO

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8850 8
 Dapeng Zhang, 2016

8._CATONGO

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8849 2 > FP
 Dapeng Zhang, 2016

9._CATONGO

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8849 3
 Dapeng Zhang, 2016

10._CATONGO

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8849 4 > FP
 Dapeng Zhang, 2016

11._CATONGO

97.4 %
39 shared markers

Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica
Location: Cabiria
 Dapeng Zhang, 2016

12._CATONGO

97.4 %
39 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 6B D254 T1
 Dapeng Zhang, 2016

13._CATONGO

96.2 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8849 7
 Dapeng Zhang, 2016

14._CATONGO

96.2 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8849 8 > FP
 Dapeng Zhang, 2016

15._CATONGO

96.2 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8850 1
 Dapeng Zhang, 2016

16._CATONGO

96.2 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8850 2
 Dapeng Zhang, 2016

17._CATONGO

96.2 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8850 4
 Dapeng Zhang, 2016

18._CATONGO

96.2 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8850 6
 Dapeng Zhang, 2016

19._CATONGO

96.2 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8850 7
 Dapeng Zhang, 2016

 


  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1350 7TcSNP1270 8TcSNP1253 9TcSNP1165 10TcSNP1144
11TcSNP1075 12TcSNP1062 13TcSNP1060 14TcSNP998 15TcSNP994
16TcSNP929 17TcSNP917 18TcSNP891 19TcSNP872 20TcSNP723
21TcSNP645 22TcSNP619 23TcSNP591 24TcSNP577 25TcSNP560
26TcSNP534 27TcSNP529 28TcSNP469 29TcSNP429 30TcSNP372
31TcSNP242 32TcSNP230 33TcSNP226 34TcSNP193 35TcSNP151
36TcSNP150 37TcSNP144 38TcSNP32 39TcSNP25