SNP Profiles of SIAL 169   View Data

 Show/Hide Profiles

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
AAAATTACGGGGCCCCCCCCGGTTCCCT
1._SIAL_505___
AAAATTACGGGGCCCCCCCCGGTTCCCT
2._SIAL_505___
AAAATTACGGGGCCCCCCCCGGTTCCCT
3._SIAL_505___
AAAATTACGGGGCCCCCCCCGGTTCCCT
4._SIAL_505___
AAAATTACGGGGCCCCCCCCGGTTCCCT
5._SIAL_505___
AAAATTACGGGGCCCCCCCCGGTTCCCT
6._SIAL_505___
AAAATTACGGGGCCCCCCCCGGTTCCCT
7._SIAL_505___
AAAATTACGGGGCCCCCCCCGGTTCCCT
8._SIAL_505___
AAAATTACGGGGCCCCCCCCGGTTCCCT
9._SIAL_505___
AAAA__ACGGGG__GGGG__GGAAGGAG
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
AACCAAGGCCCGCTAATTGGTTAACCGG
1._SIAL_505___
AACCAAGGCCCGCTAATTGGTTAACCGG
2._SIAL_505___
AACCAAGGCCCGCTAATTGGTTAACCGG
3._SIAL_505___
AACCAAGGCCCGCTAATTGGTTAACCGG
4._SIAL_505___
AACCAAGGCCCGCTAATTGGTTAACCGG
5._SIAL_505___
AACCAAGGCCCGCTAATTGGTTAACCGG
6._SIAL_505___
AACCAAGGCCCGCTAATTGGTTAACCGG
7._SIAL_505___
AACCAAGGCCCGCTAATTGGTTAACCGG
8._SIAL_505___
AACCAAGGCCCGCTAATTGGTTAACCGG
9._SIAL_505___
TTCCAACC__CGAGGGAAGGTTAAGGCC
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
AATTGGAACGCCGGTTGGTTAGTTAACC
1._SIAL_505___
AATTGGAACGCCGGTTGGTTAGTTAACC
2._SIAL_505___
AATTGGAACGCCGGTTGGTTAGTTAACC
3._SIAL_505___
AATTGGAACGCCGGTTGGTTAGTTAACC
4._SIAL_505___
AATTGGAACGCCGGTTGGTTAGTTAACC
5._SIAL_505___
AATTGGAACGCCGGTTGGTTAGTTAACC
6._SIAL_505___
AATTGGAACGCCGGTTGGTTAGTTAACC
7._SIAL_505___
AATTGGAACGCCGGTTGGTTAGTTAACC
8._SIAL_505___
AATTGGAACGCCGGTTGGTTAGTTAACC
9._SIAL_505___
AAAACCAACGCCGGAA__AAAGAAAAGG
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
GGTTCCAAGGAACCCCGGGGGTTTCCTT
1._SIAL_505___
GGTTCCAAGGAACCCCGGGGGTTTCCTT
2._SIAL_505___
GGTTCCAAGGAACCCCGGGGGTTTCCTT
3._SIAL_505___
GGTTCCAAGGAACCCCGGGGGTTTCCTT
4._SIAL_505___
GGTTCCAAGGAACCCCGGGGGTTTCCTT
5._SIAL_505___
GGTTCCAAGGAACCCCGGGGGTTTCCTT
6._SIAL_505___
GGTTCCAAGGAACCCCGGGGGTTTCCTT
7._SIAL_505___
GGTTCCAAGGAACCCCGGGGGTTTCCTT
8._SIAL_505___
GGTTCCAAGGAACCCCGGGGGTTTCCTT
9._SIAL_505___
CC__GG__GGAAGG__GGGGACAAGGAA
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
TTCCTTCCAAGGGGACAATTGGGGTTCC
1._SIAL_505___
TTCCTTCCAAGGGGACAATTGGGGTTCC
2._SIAL_505___
TTCCTTCCAAGGGGACAATTGGGGTTCC
3._SIAL_505___
TTCCTTCCAAGGGGACAATTGGGGTTCC
4._SIAL_505___
TTCCTTCCAAGGGGACAATTGGGGTTCC
5._SIAL_505___
TTCCTTCCAAGGGGACAATTGGGGTTCC
6._SIAL_505___
TTCCTTCCAAGGGGACAATTGGGGTTCC
7._SIAL_505___
TTCCTTCCAAGGGGACAATTGGGGTTCC
8._SIAL_505___
TTCCTTCCAAGGGGACAATTGGGGTTCC
9._SIAL_505___
AAGGAAGGAAGGGGACAAAACCGG____
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
_Input profile
GGTTACAACCAAAACCGGCCTTAATTTT
1._SIAL_505___
GGTTACAACCAAAACCGGCCTTAATTTT
2._SIAL_505___
GGTTACAACCAAAACCGGCCTTAATTTT
3._SIAL_505___
GGTTACAACCAAAACCGGCCTTAATTTT
4._SIAL_505___
GGTTACAACCAAAACCGGCCTTAATTTT
5._SIAL_505___
GGTTACAACCAAAACCGGCCTTAATTTT
6._SIAL_505___
GGTTACAACCAAAACCGGCCTTAATTTT
7._SIAL_505___
GGTTACAACCAAAACCGGCCTT__TTTT
8._SIAL_505___
GGTTACAACCAAAACCGGCCTTAATTTT
9._SIAL_505___
__AAACAACCAA__CCCCGGTTAAAAAA
 85 86 87 88 89 90 91 92 93      
_Input profile
CTTTAACTCCTTTTAAGGX_XX_XX_XX_XX_X
1._SIAL_505___
CTTTAACTCCTTTTAAGGX_XX_XX_XX_XX_X
2._SIAL_505___
CTTTAACTCCTTTTAAGGX_XX_XX_XX_XX_X
3._SIAL_505___
CTTTAACTCCTTTTAAGGX_XX_XX_XX_XX_X
4._SIAL_505___
CTTTAACTCCTTTTAAGGX_XX_XX_XX_XX_X
5._SIAL_505___
CTTTAACTCCTTTTAAGGX_XX_XX_XX_XX_X
6._SIAL_505___
CTTTAACTCCTTTTAAGGX_XX_XX_XX_XX_X
7._SIAL_505___
CTTTAACTCCTTTTAAGGX_XX_XX_XX_XX_X
8._SIAL_505___
CTTT__CTCCTTTTAAGGX_XX_XX_XX_XX_X
9._SIAL_505___
__AA____GGAAAATTGGX_XX_XX_XX_XX_X

Input profile: SIAL_505 GC-01-048-3-03

 
Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14 > FP4
 Mars, 2018

1._SIAL_505 GC-01-048-3-03

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

2._SIAL_505 GC-01-048-3-03

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

3._SIAL_505 GC-01-048-3-03

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7 > FP3
 Mars, 2018

4._SIAL_505 GC-01-048-3-03

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

5._SIAL_505 GC-01-048-3-03

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

6._SIAL_505 GC-01-048-3-03

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 15
Notes: 15
 Mars, 2018

7._SIAL_505 GC-01-048-3-03

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5 > FP2
 Mars, 2018

8._SIAL_505 GC-01-048-3-03

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9 > FP1
 Mars, 2018

9._SIAL_505 GC-01-48-3-3

47.4 %
78 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 3, Rep: 3, Tree: 4
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP1062 18TcSNP836 19TcSNP878 20TcSNP929
21TcSNP413 22TcSNP653 23TcSNP1149 24TcSNP174 25TcSNP32
26TcSNP372 27TcSNP448 28TcSNP872 29TcSNP953 30TcSNP1034
31TcSNP1175 32TcSNP1111 33TcSNP577 34TcSNP90 35TcSNP998
36TcSNP150 37TcSNP28 38TcSNP751 39TcSNP1484 40TcSNP602
41TcSNP561 42TcSNP894 43TcSNP1063 44TcSNP1126 45TcSNP1270
46TcSNP606 47TcSNP329 48TcSNP689 49TcSNP944 50TcSNP1242
51TcSNP1383 52TcSNP547 53TcSNP776 54TcSNP1309 55TcSNP151
56TcSNP1520 57TcSNP799 58TcSNP226 59TcSNP1439 60TcSNP1442
61TcSNP193 62TcSNP25 63TcSNP364 64TcSNP144 65TcSNP230
66TcSNP560 67TcSNP723 68TcSNP731 69TcSNP701 70TcSNP1041
71TcSNP645 72TcSNP917 73Tcm003s01336581 74Tcm003s07402719 75Tcm001s00947643
76Tcm006s26664133 77Tcm002s20575712 78TcSNP529 79TcSNP1458 80TcSNP60
81TcSNP430 82TcSNP823 83TcSNP619 84TcSNP994 85TcSNP1144
86TcSNP1156 87TcSNP469 88TcSNP999 89TcSNP242 90TcSNP1253
91TcSNP1414 92TcSNP154 93TcSNP240