SNP Profiles of CATONGO   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
AAAATTAAGGGGCCCCCCCCGGTTCCTT
1._GU_207___
AAAATTAAGGGGCCCCCCCCGGTTCCTT
2._GU_207___
AAAATTAAGGGGCCCCCCCCGGTTCCTT
3._GU_207___
AAAATTAAGGGGCCCCCCCCGGTTCCTT
4._GU_207___
AAAATTAAGGGGCCCCCCCCGGTTCCTT
5._GU_207___
AAAATTAAGGGGCCCCCCCCGGTTCCTT
6._GU_207___
AAAATTAAGGGGCCCCCCCCGGTTCCTT
7._GU_207___
AAAATTAAGGGGCCCCCCCCGGTTCCTT
8._GU_207___
AAAATTAAGGGGCCCCCCCCGGTTCCTT
9._GU_207___
AAAATTAAGGGGCCCCCCCCGGTTCCTT
10._GU_207___
AAAA__AAGGGG__GGGG__GGAAGGAA
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
AACCAAGGCCGGTTAATTGGTTAACCGG
1._GU_207___
AACCAAGGCCGGTTAATTGGTTAACCGG
2._GU_207___
AACCAAGGCCGGTTAATTGGTTAACCGG
3._GU_207___
AACCAAGGCCGGTTAATTGGTTAACCGG
4._GU_207___
AACCAAGGCCGGTTAATTGGTTAACCGG
5._GU_207___
AACCAAGGCCGGTTAATTGGTTAACCGG
6._GU_207___
AACCAAGGCCGGTTAATTGGTTAACCGG
7._GU_207___
AACCAAGGCCGGTTAATTGGTTAACCGG
8._GU_207___
AACCAAGGCCGGTTAATTGGTTAACCGG
9._GU_207___
AACCAAGGCCGGTTAATTGGTTAACCGG
10._GU_207___
TTCCAACC__GGAAGGAAGGTTAAGGCC
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
AATTGGGGCCCCGGTTGGTTAATTAACC
1._GU_207___
AATTGGGGCCCCGGTTGGTTAATTAACC
2._GU_207___
AATTGGGGCCCCGGTTGGTTAATTAACC
3._GU_207___
AATTGGGGCCCCGGTTGGTTAATTAACC
4._GU_207___
AATTGGGGCCCCGGTTGGTTAATTAACC
5._GU_207___
AATTGGGGCCCCGGTTGGTTAATTAACC
6._GU_207___
AATTGGGGCCCCGGTTGGTTAATTAACC
7._GU_207___
AATTGGGGCCCCGGTTGGTTAATTAACC
8._GU_207___
AATTGGGGCCCCGGTTGGTTAATTAACC
9._GU_207___
AATTGGGGCCCCGGTTGGTTAATTAACC
10._GU_207___
AAAACCGGCCCCGGAA__AAAAAAAAGG
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
GGTTCCAAGGAACCCCGGGGTTTTCCTT
1._GU_207___
GGTTCCAAGGAACCCCGGGGTTTTCCTT
2._GU_207___
GGTTCCAAGGAACCCCGGGGTTTTCCTT
3._GU_207___
GGTTCCAAGGAACCCCGGGGTTTTCCTT
4._GU_207___
GGTTCCAAGGAACCCCGGGGTTTTCCTT
5._GU_207___
GGTTCCAAGGAACCCCGGGGTTTTCCTT
6._GU_207___
GGTTCCAAGGAACCCCGGGGTTTTCCTT
7._GU_207___
GGTTCCAAGGAACCCCGGGGTTTTCCTT
8._GU_207___
GGTTCCAAGGAACCCCGGGGTTTTCCTT
9._GU_207___
GGTTCCAAGGAACCCCGGGGTTTTCCTT
10._GU_207___
CC__GG__GGAAGG__GGGGAAAAGGAA
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
TTAACCTTCCAAGGGGAATTGGGGTTCC
1._GU_207___
TTAACCTTCCAAGGGGAATTGGGGTTCC
2._GU_207___
TTAACCTTCCAAGGGGAATTGGGGTTCC
3._GU_207___
TTAACCTTCCAAGGGGAATTGGGGTTCC
4._GU_207___
TTAACCTTCCAAGGGGAATTGGGGTTCC
5._GU_207___
TTAACCTTCCAAGGGGAATTGGGGTTCC
6._GU_207___
TTAACCTTCCAAGGGGAATTGGGGTTCC
7._GU_207___
TTAACCTTCCAAGGGGAATTGGGGTTCC
8._GU_207___
TTAACCTTCC__GGGGAATTGGGGTTCC
9._GU_207___
TT__CCTTCCAAGGGGAATTGGGGTTCC
10._GU_207___
AAAAGGAAGGAAGGGGAAAACCGG____
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
_Input profile
GGTTCCAACCAAAACCGGCCTTAATTTT
1._GU_207___
GGTTCCAACCAAAACCGGCCTTAATTTT
2._GU_207___
GGTTCCAACCAAAACCGGCCTTAATTTT
3._GU_207___
GGTTCCAACCAAAACCGGCCTTAATTTT
4._GU_207___
GGTTCCAACCAAAACCGGCCTTAATTTT
5._GU_207___
GGTTCCAACCAAAACCGGCCTTAATTTT
6._GU_207___
GGTTCCAACCAAAACCGGCCTTAATTTT
7._GU_207___
GGTTCCAACCAAAACCGGCCTTAATTTT
8._GU_207___
GGTTCCAACCAAAACCGGCCTTAATTTT
9._GU_207___
GGTTCCAACCAAAACCGGCCTTAATTTT
10._GU_207___
__AACCAACCAA__CCCCGGTTAAAAAA
 85 86 87 88 89 90 91 92       
_Input profile
TTTTAATTCCTTAAGGX_XX_XX_XX_XX_XX_X
1._GU_207___
TTTTAATTCCTTAAGGX_XX_XX_XX_XX_XX_X
2._GU_207___
TTTTAATTCCTTAAGGX_XX_XX_XX_XX_XX_X
3._GU_207___
TTTTAATTCCTTAAGGX_XX_XX_XX_XX_XX_X
4._GU_207___
TTTTAATTCCTTAAGGX_XX_XX_XX_XX_XX_X
5._GU_207___
TTTTAATTCCTTAAGGX_XX_XX_XX_XX_XX_X
6._GU_207___
TTTTAATTCCTTAAGGX_XX_XX_XX_XX_XX_X
7._GU_207___
TTTTAATTCCTTAAGGX_XX_XX_XX_XX_XX_X
8._GU_207___
TTTTAATTCCTTAAGGX_XX_XX_XX_XX_XX_X
9._GU_207___
TTTTAATTCCTTAAGGX_XX_XX_XX_XX_XX_X
10._GU_207___
__AA____GGAATTGGX_XX_XX_XX_XX_XX_X

Input profile: GU_207 GC-01-056-3-11

 
Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

1._GU_207 GC-01-056-3-11

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

2._GU_207 GC-01-056-3-11

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

3._GU_207 GC-01-056-3-11

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6 > FP3
 Mars, 2018

4._GU_207 GC-01-056-3-11

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

5._GU_207 GC-01-056-3-11

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

6._GU_207 GC-01-056-3-11

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

7._GU_207 GC-01-056-3-11

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12 > FP4
 Mars, 2018

8._GU_207 GC-01-056-3-11

identical
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

9._GU_207 GC-01-056-3-11

identical
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

10._GU_207 GC-01-56-3-11

48.1 %
77 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 3, Rep: 11, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP1062 18TcSNP836 19TcSNP878 20TcSNP929
21TcSNP413 22TcSNP653 23TcSNP1149 24TcSNP174 25TcSNP32
26TcSNP372 27TcSNP448 28TcSNP872 29TcSNP953 30TcSNP1034
31TcSNP1175 32TcSNP1111 33TcSNP577 34TcSNP90 35TcSNP998
36TcSNP150 37TcSNP28 38TcSNP751 39TcSNP1484 40TcSNP602
41TcSNP561 42TcSNP894 43TcSNP1063 44TcSNP1126 45TcSNP1270
46TcSNP606 47TcSNP329 48TcSNP689 49TcSNP944 50TcSNP1242
51TcSNP1383 52TcSNP547 53TcSNP776 54TcSNP1309 55TcSNP151
56TcSNP1520 57TcSNP799 58TcSNP899 59TcSNP226 60TcSNP1439
61TcSNP1442 62TcSNP193 63TcSNP25 64TcSNP364 65TcSNP230
66TcSNP560 67TcSNP723 68TcSNP731 69TcSNP701 70TcSNP1041
71TcSNP645 72TcSNP917 73Tcm003s01336581 74Tcm003s07402719 75Tcm001s00947643
76Tcm006s26664133 77Tcm002s20575712 78TcSNP529 79TcSNP1458 80TcSNP60
81TcSNP430 82TcSNP823 83TcSNP619 84TcSNP994 85TcSNP1144
86TcSNP1156 87TcSNP469 88TcSNP999 89TcSNP242 90TcSNP1253
91TcSNP154 92TcSNP240