SNP Profiles of GU 144 /C   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
AACCCCGGGGTTCCCCCCGGTTCCTTAA
1._GC-01-073-4-09
AACCCCGGGGTTCCCCCCGGTTCCTTAA
2._GC-01-073-4-09
AACCCCGGGGTTCCCCCCGGTTCCTTAA
3._GC-01-073-4-09
AACCCCGGGGTTCCCCCCGGTTCCTTAA
4._GC-01-073-4-09
AACCCCGGGGTTCCCCCCGGTTCCTTAA
5._GC-01-073-4-09
AACCCCGGGGTTCCCCCCGGTTCCTTAA
6._GC-01-073-4-09
AACCCCGGGGTTCCCCCCGGTTCCTTAA
7._GC-08-223-6-19
AACCCCGGGGTTCCCCCCGGTTCCTTAA
8._GC-08-223-6-19
AACCCCGGGGTTCCCCCCGGTTCCTTAA
9._GC-08-223-6-19
AACCCCGGGGTTCCCCCCGGTTCCTTAA
10._GC-08-223-6-19
AACCCCGGGGTTCCCCCCGGTTCCTTAA
11._GC-08-223-6-19
AACCCCGGGGTTCCCCCCGGTTCCTTAA
12._GC-08-224-6-20
AACCCCGGGGTTCCCCCCGGTTCCTTAA
13._GC-08-224-6-20
AACCCCGGGGTTCCCCCCGGTTCCTTAA
14._GC-08-224-6-20
AACCCCGGGGTTCCCCCCGGTTCCTTAA
15._GC-01-073-4-09
AACCCCGGGGTTCCCCCCGGTTCCTTAA
16._GC-08-223-6-19
AACCCCGGGGTTCCCCCCGGTTCCTTAA
17._GC-08-224-6-20
AACCCCGGGGTTCCCCCCGGTTCCTTAA
18._GU_144_/C
AACCCC________CCCCGG__CC____
19._GU_144_/C
AACCCC________CCCCGG__CC____
20._GU_144_/C
AACCCC________CCCCGG__CC____
21._GU_144_/C
AACCCC________CCCCGG__CC____
22._GU_144_/C
AACCCC________CCCCGG__CC____
23._GU_144_/C
AACCCC________CCCCGG__CC____
24._GU_144_/C
AACCCC________CCCCGG__CC____
25._GU_144_/C
AACCCC________CCCCGG__CC____
26._GU_144_/C
AACCCC________CCCCGG__CC____
27._GU_144_/C
AACCCC________CCCCGG__CC____
28._GU_144_/C
AACCCC________CCCCGG__CC____
29._GU_144_/C
AACCCC________CCCCGG__CC____
30._GU_144_/C
AACCCC________CCCCGG__CC____
31._GU_144_/C
AACCCC________CCCCGG__CC____
32._GU_144_/C
AACCCC________CCCCGG__CC____
33._GU_144_/C
AACCCC________CCCCGG__CC____
34._GU_144_/C
AACCCC________CCCCGG__CC____
35._GU_144_/C
AACCCC________CCCCGG__CC____
36._RUQ_191
AACCCC________CCCCGG__CC____
37._RUQ_191
__CCCC____CC__CC____TTCC____
38._GC-01-073-4-09
AACCACGGGGCTCCCCCCGGTTCCTTAA
39._GC-01-073-4-09
AACCACGGGGCTCCCCCCGGTTCCTTAA
40._GC-08-224-6-20
AACCACGGGGCTCCCCCCGGTTCCTTAA
41._GU_144_/C
AACCAC________CCCCGG__CC____
42._GU_144_/C
AACCAC________CCCCGG__CC____
43._GU_144_/C
AACCAC________CCCCGG__CC____
44._RUQ_191
____CC____CC________________
45._GC-08-223-6-19
ATTTACAGAGCTCTCCCCGGTTCCCTAA
46._GC-08-224-6-20
ATCTACAGAGCTCTCCCTAGTTCTTTAT
47._GU_144_/C
ATCTAC________CCCTAG__CT____
48._GU_144_/C
ATTTAC________CCCCGG__CC____
49._GC-01-73-4-9
AA__CCGGGG__GGGG__GGAAGGAATT
50._GC-01-73-4-9
AA__CCGGGG__GGGG__GGAAGGAATT
51._RUQ_191
AA__CCGGGG__GGGG__GGAAGGAATT
52._MITC-000578
AA__CCGGGG__GGGG__GGAAGGAATT
53._MITC-000615
AA__CCGGGG__GGGG__GGAAGGAATT
54._GC-01-73-4-9
AA__ACGGGG__GGGG__GGAAGGAATT
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
CCGGGGCCGGCTAATTGGAAAACCGGAA
1._GC-01-073-4-09
CCGGGGCCGGCTAATTGGAAAACCGGAA
2._GC-01-073-4-09
CCGGGGCCGGCTAATTGGAAAACCGGAA
3._GC-01-073-4-09
CCGGGGCCGGCTAATTGGAAAACCGGAA
4._GC-01-073-4-09
CCGGGGCCGGCTAATTGGAAAACCGGAA
5._GC-01-073-4-09
CCGGGGCCGGCTAATTGGAAAACCGGAA
6._GC-01-073-4-09
CCGGGGCCGGCTAATTGGAAAACCGGAA
7._GC-08-223-6-19
CCGGGGCCGGCTAATTGGAAAACCGGAA
8._GC-08-223-6-19
CCGGGGCCGGCTAATTGGAAAACCGGAA
9._GC-08-223-6-19
CCGGGGCCGGCTAATTGGAAAACCGGAA
10._GC-08-223-6-19
CCGGGGCCGGCTAATTGGAAAACCGGAA
11._GC-08-223-6-19
CCGGGGCCGGCTAATTGGAAAACCGGAA
12._GC-08-224-6-20
CCGGGGCCGGCTAATTGGAAAACCGGAA
13._GC-08-224-6-20
CCGGGGCCGGCTAATTGGAAAACCGGAA
14._GC-08-224-6-20
CCGGGGCCGGCTAATTGGAAAACCGGAA
15._GC-01-073-4-09
CCGGGGCCGGCTAA__GGAAAACCGGAA
16._GC-08-223-6-19
CCGGGGCCGGCTAATTGGAAAACCGGAA
17._GC-08-224-6-20
CCGGGGCCGGCTAATTGGAAAACCGGAA
18._GU_144_/C
__GG____GG________AAAA__GGAA
19._GU_144_/C
__GG____GG________AAAA__GGAA
20._GU_144_/C
__GG____GG________AAAA__GGAA
21._GU_144_/C
__GG____GG________AAAA__GGAA
22._GU_144_/C
__GG____GG________AAAA__GGAA
23._GU_144_/C
__GG____GG________AAAA__GGAA
24._GU_144_/C
__GG____GG________AAAA__GGAA
25._GU_144_/C
__GG____GG________AAAA__GGAA
26._GU_144_/C
__GG____GG________AAAA__GGAA
27._GU_144_/C
__GG____GG________AAAA__GGAA
28._GU_144_/C
__GG____GG________AAAA__GGAA
29._GU_144_/C
__GG____GG________AAAA__GGAA
30._GU_144_/C
__GG____GG________AAAA__GGAA
31._GU_144_/C
__GG____GG________AAAA__GGAA
32._GU_144_/C
__GG____GG________AAAA__GGAA
33._GU_144_/C
__GG____GG________AAAA__GGAA
34._GU_144_/C
__GG____GG________AAAA__GGAA
35._GU_144_/C
__GG____GG________AAAA__GGAA
36._RUQ_191
__GG____GG________AAAA__GGAA
37._RUQ_191
______CC________GG__AACCGG__
38._GC-01-073-4-09
CCGGGGCCGGTTAATTGGTTAACCGGAA
39._GC-01-073-4-09
CCGGGGCCGGTTAATTGGTTAACCGGAA
40._GC-08-224-6-20
CCGGGG__GGTTAATTGGTTAACCGGAA
41._GU_144_/C
__GG____GG________TTAA__GGAA
42._GU_144_/C
__GG____GG________TTAA__GGAA
43._GU_144_/C
__GG____GG________TTAA__GGAA
44._RUQ_191
__GGCT__________________GG__
45._GC-08-223-6-19
CCAACGCCCCCCAATTGGATAACGGGAA
46._GC-08-224-6-20
AAGGCGCGCGCTAACTGGATAACGCCAT
47._GU_144_/C
__GG____CG________ATAA__CCAT
48._GU_144_/C
__AA____CC________ATAA__GGAA
49._GC-01-73-4-9
CCGGCC__GGAGGGAAGGAAAAGGCCAA
50._GC-01-73-4-9
CCGGCC__GGAGGGAAGGAAAAGGCCAA
51._RUQ_191
CCGGCC__GGAGGGAAGGAAAAGGCCAA
52._MITC-000578
CCGGCC__GGAGGGAAGGAAAAGGCCAA
53._MITC-000615
CCGGCC__GGAGGGAAGGAAAAGGCCAA
54._GC-01-73-4-9
CCGGCC__GGAAGGAAGGTTAAGGCCAA
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
TTTTGGCCCCAATTGGGGGGCCAGCCGG
1._GC-01-073-4-09
TTTTGGCCCCAATTGGGGGGCCAGCCGG
2._GC-01-073-4-09
TTTTGGCCCCAATTGGGGGGCCAGCCGG
3._GC-01-073-4-09
TTTTGGCCCCAATTGGGGGGCCAGCCGG
4._GC-01-073-4-09
TTTTGGCCCCAATTGGGGGGCCAGCCGG
5._GC-01-073-4-09
TTTTGGCCCCAATTGGGGGGCCAGCCGG
6._GC-01-073-4-09
TTTTGGCCCCAATTGGGGGGCCAGCCGG
7._GC-08-223-6-19
TTTTGGCCCCAATTGGGGGGCCAGCCGG
8._GC-08-223-6-19
TTTTGGCCCCAATTGGGGGGCCAGCCGG
9._GC-08-223-6-19
TTTTGGCCCCAATTGGGGGGCCAGCCGG
10._GC-08-223-6-19
TTTTGGCCCCAATTGGGGGGCCAGCCGG
11._GC-08-223-6-19
TTTTGGCCCCAATTGGGGGGCCAGCCGG
12._GC-08-224-6-20
TTTTGGCCCCAATTGGGGGGCCAGCCGG
13._GC-08-224-6-20
TTTTGGCCCCAATTGGGGGGCCAGCCGG
14._GC-08-224-6-20
TTTTGGCCCCAATTGGGGGGCCAGCCGG
15._GC-01-073-4-09
TTTTGGCCCCAATTGGGGGGCCAGCCGG
16._GC-08-223-6-19
TTTTGGCCCCAATTGGGGGGCCAGCCGG
17._GC-08-224-6-20
TTTTGGCCCCAATTGGGGGG__AGCCGG
18._GU_144_/C
______CC__AATT____GG________
19._GU_144_/C
______CC__AATT____GG________
20._GU_144_/C
______CC__AATT____GG________
21._GU_144_/C
______CC__AATT____GG________
22._GU_144_/C
______CC__AATT____GG________
23._GU_144_/C
______CC__AATT____GG________
24._GU_144_/C
______CC__AATT____GG________
25._GU_144_/C
______CC__AATT____GG________
26._GU_144_/C
______CC__AATT____GG________
27._GU_144_/C
______CC__AATT____GG________
28._GU_144_/C
______CC__AATT____GG________
29._GU_144_/C
______CC__AATT____GG________
30._GU_144_/C
______CC__AATT____GG________
31._GU_144_/C
______CC__AATT____GG________
32._GU_144_/C
______CC__AATT____GG________
33._GU_144_/C
______CC__AATT____GG________
34._GU_144_/C
______CC__AATT____GG________
35._GU_144_/C
______CC__AATT____GG________
36._RUQ_191
______CC__AATT____GG________
37._RUQ_191
____GGCCCCAATT____GGCC____GG
38._GC-01-073-4-09
TTTTGGCCCCGGTTGGGGGGCCGGCCGG
39._GC-01-073-4-09
TTTTGGCCCCGGTTGGGGGGCCGGCCGG
40._GC-08-224-6-20
TTTTGGCCCCGGTTGGGGGGCCGGCCGG
41._GU_144_/C
______CC__GGTT____GG________
42._GU_144_/C
______CC__GGTT____GG________
43._GU_144_/C
______CC__GGTT____GG________
44._RUQ_191
______CC__AA________CC______
45._GC-08-223-6-19
TTGTGGCCCCGGGTGTTTAACTAGCCGG
46._GC-08-224-6-20
TTGTGGGGCCAGGGGTTTAACCGGCCGG
47._GU_144_/C
______GG__AGGG____AA________
48._GU_144_/C
______CC__GGGT____AA________
49._GC-01-73-4-9
AAAAGGCCCCAAAACCCCGGGGAGGGCC
50._GC-01-73-4-9
AAAAGGCCCCAAAACCCCGGGGAGGGCC
51._RUQ_191
AAAAGGCCCCAAAACCCCGGGGAGGGCC
52._MITC-000578
AAAAGGCCCCAAAACCCCGGGGAGGGCC
53._MITC-000615
AAAAGGCCCCAAAACCCCGGGGAGGGCC
54._GC-01-73-4-9
AAAAGGCCCCGGAACCCCGGGGGGGGCC
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
TTTTAAGGAACCCCGGGGTTTTTTCCTT
1._GC-01-073-4-09
TTTTAAGGAACCCCGGGGTTTTTTCCTT
2._GC-01-073-4-09
TTTTAAGGAACCCCGGGGTTTTTTCCTT
3._GC-01-073-4-09
TTTTAAGGAACCCCGGGGTTTTTTCCTT
4._GC-01-073-4-09
TTTTAAGGAACCCCGGGGTTTTTTCCTT
5._GC-01-073-4-09
TTTTAAGGAACCCCGGGGTTTTTTCCTT
6._GC-01-073-4-09
TTTTAAGGAACCCCGGGGTTTTTTCCTT
7._GC-08-223-6-19
TTTTAAGGAACCCCGGGGTTTTTTCCTT
8._GC-08-223-6-19
TTTTAAGGAACCCCGGGGTTTTTTCCTT
9._GC-08-223-6-19
TTTTAAGGAACCCCGGGGTTTTTTCCTT
10._GC-08-223-6-19
TTTTAAGGAACCCCGGGGTTTTTTCCTT
11._GC-08-223-6-19
TTTTAAGGAACCCCGGGGTTTTTTCCTT
12._GC-08-224-6-20
TTTTAAGGAACCCCGGGGTTTTTTCCTT
13._GC-08-224-6-20
TTTTAAGGAACCCCGGGGTTTTTTCCTT
14._GC-08-224-6-20
TTTTAAGGAACCCCGGGGTTTTTTCCTT
15._GC-01-073-4-09
TTTTAAGGAACCCCGGGGTTTTTTCCTT
16._GC-08-223-6-19
TTTTAAGGAACCCCGGGGTTTTTTCC__
17._GC-08-224-6-20
TTTTAAGGAACCCCGGGGTTTTTTCCTT
18._GU_144_/C
__TT__________________TTCC__
19._GU_144_/C
__TT__________________TTCC__
20._GU_144_/C
__TT__________________TTCC__
21._GU_144_/C
__TT__________________TTCC__
22._GU_144_/C
__TT__________________TTCC__
23._GU_144_/C
__TT__________________TTCC__
24._GU_144_/C
__TT__________________TTCC__
25._GU_144_/C
__TT__________________TTCC__
26._GU_144_/C
__TT__________________TTCC__
27._GU_144_/C
__TT__________________TTCC__
28._GU_144_/C
__TT__________________TTCC__
29._GU_144_/C
__TT__________________TTCC__
30._GU_144_/C
__TT__________________TTCC__
31._GU_144_/C
__TT__________________TTCC__
32._GU_144_/C
__TT__________________TTCC__
33._GU_144_/C
__TT__________________TTCC__
34._GU_144_/C
__TT__________________TTCC__
35._GU_144_/C
__TT__________________TTCC__
36._RUQ_191
__TT__________________TTCC__
37._RUQ_191
TT____GG____________CTTT__TT
38._GC-01-073-4-09
TTTTAAGGAACCCCGGGGTTTTTTCCTT
39._GC-01-073-4-09
TTTTAAGGAACCCCGGGGTTTTTTCCTT
40._GC-08-224-6-20
TTTTAAGGAACCCCGGGGTTTTTTCCTT
41._GU_144_/C
__TT__________________TTCC__
42._GU_144_/C
__TT__________________TTCC__
43._GU_144_/C
__TT__________________TTCC__
44._RUQ_191
______GG____________________
45._GC-08-223-6-19
TTCCAAGGAACCCCGGGGGTTT__TTTT
46._GC-08-224-6-20
TTTTAGAGAACCAAAGAGGGTTTTCCTT
47._GU_144_/C
__TT__________________TTCC__
48._GU_144_/C
__CC____________________TT__
49._GC-01-73-4-9
__AA__GGAAGG__GGGGAAAGAAGGAA
50._GC-01-73-4-9
__AA__GGAAGG__GGGGAAAGAAGGAA
51._RUQ_191
__AA__GGAAGG__GGGGAAAGAAGGAA
52._MITC-000578
__AA__GGAAGG__GGGGAAAGAAGGAA
53._MITC-000615
__AA__GGAAGG__GGGGAAAGAAGGAA
54._GC-01-73-4-9
__AA__GGAAGG__GGGGAAAGAAGGAA
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
GGCCCCCCAAGGGGAAGGGGGGAACCCC
1._GC-01-073-4-09
GGCCCCCCAAGGGGAAGGGGGGAACCCC
2._GC-01-073-4-09
GGCCCCCCAAGGGGAAGGGGGGAACCCC
3._GC-01-073-4-09
GGCCCCCCAAGGGGAAGGGGGGAACCCC
4._GC-01-073-4-09
GGCCCCCCAAGGGGAAGGGGGGAACCCC
5._GC-01-073-4-09
GGCCCCCCAAGGGGAAGGGGGGAACCCC
6._GC-01-073-4-09
GGCCCCCCAAGGGGAAGGGGGGAACCCC
7._GC-08-223-6-19
GGCCCCCCAAGGGGAAGGGGGGAACCCC
8._GC-08-223-6-19
GGCCCCCCAAGGGGAAGGGGGGAACCCC
9._GC-08-223-6-19
GGCCCCCCAAGGGGAAGGGGGGAACCCC
10._GC-08-223-6-19
GGCCCCCCAAGGGGAAGGGGGGAACCCC
11._GC-08-223-6-19
GGCCCCCCAAGGGGAAGGGGGGAACCCC
12._GC-08-224-6-20
GGCCCCCCAAGGGGAAGGGGGGAACCCC
13._GC-08-224-6-20
GGCCCCCCAAGGGGAAGGGGGGAACCCC
14._GC-08-224-6-20
GGCCCCCCAAGGGGAAGGGGGGAACCCC
15._GC-01-073-4-09
GGCCCCCCAAGGGGAAGGGGGGAACCCC
16._GC-08-223-6-19
GGCCCCCCAAGGGGAAGGGGGGAACCCC
17._GC-08-224-6-20
GGCCCCCCAAGGGGAAGGGGGGAACCCC
18._GU_144_/C
__CC__CCAAGG__AAGGGGGG______
19._GU_144_/C
__CC__CCAAGG__AAGGGGGG______
20._GU_144_/C
__CC__CCAAGG__AAGGGGGG______
21._GU_144_/C
__CC__CCAAGG__AAGGGGGG______
22._GU_144_/C
__CC__CCAAGG__AAGGGGGG______
23._GU_144_/C
__CC__CCAAGG__AAGGGGGG______
24._GU_144_/C
__CC__CCAAGG__AAGGGGGG______
25._GU_144_/C
__CC__CCAAGG__AAGGGGGG______
26._GU_144_/C
__CC__CCAAGG__AAGGGGGG______
27._GU_144_/C
__CC__CCAAGG__AAGGGGGG______
28._GU_144_/C
__CC__CCAAGG__AAGGGGGG______
29._GU_144_/C
__CC__CCAAGG__AAGGGGGG______
30._GU_144_/C
__CC__CCAAGG__AAGGGGGG______
31._GU_144_/C
__CC__CCAAGG__AAGGGGGG______
32._GU_144_/C
__CC__CCAAGG__AAGGGGGG______
33._GU_144_/C
__CC__CCAAGG__AAGGGGGG______
34._GU_144_/C
__CC__CCAAGG__AAGGGGGG______
35._GU_144_/C
__CC__CCAAGG__AAGGGGGG______
36._RUQ_191
__CC__CCAAGG__AAGGGGGG______
37._RUQ_191
__CCCCCCAA__GGAAGGGGGGAA____
38._GC-01-073-4-09
GGCCCCCCAAGGGGAAGGGGGGAACCCC
39._GC-01-073-4-09
GGCCCCCCAAGGGGAAGGGGGGAACCCC
40._GC-08-224-6-20
GGCCCCCCAAGGGGAAGGGGGGAACCCC
41._GU_144_/C
__CC__CCAAGG__AAGGGGGG______
42._GU_144_/C
__CC__CCAAGG__AAGGGGGG______
43._GU_144_/C
__CC__CCAAGG__AAGGGGGG______
44._RUQ_191
GG____________AAGG__GGAA____
45._GC-08-223-6-19
AACCCTCCACCGGGACAATTGGGGTTCC
46._GC-08-224-6-20
GGCCCCTTACCGGGCCAAGGGGAGTTCC
47._GU_144_/C
__CC__TTACCG__CCAAGGGG______
48._GU_144_/C
__CC__CCACCG__ACAATTGG______
49._GC-01-73-4-9
GGGGGGGGAAGGGGAAGGCCCCAA____
50._GC-01-73-4-9
GGGGGGGGAAGGGGAAGGCCCCAA____
51._RUQ_191
GGGGGGGGAAGGGGAAGGCCCCAA____
52._MITC-000578
GGGGGGGGAAGGGGAAGGCCCCAA____
53._MITC-000615
GGGGGGGGAAGGGGAAGGCCCCAA____
54._GC-01-73-4-9
GGGGGGGGAAGGGGAAGGCCCCAA____
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
_Input profile
GGCCAAAGCCCCGGAAGGTTAACCCCCC
1._GC-01-073-4-09
GGCCAAAGCCCCGGAAGGTTAACCCCCC
2._GC-01-073-4-09
GGCCAAAGCCCCGGAAGGTTAACCCCCC
3._GC-01-073-4-09
GGCCAAAGCCCCGGAAGGTTAACCCCCC
4._GC-01-073-4-09
GGCCAAAGCCCCGGAAGGTTAACCCCCC
5._GC-01-073-4-09
GGCCAAAGCCCCGGAAGGTTAACCCCCC
6._GC-01-073-4-09
GGCCAAAGCCCCGGAAGGTTAACCCCCC
7._GC-08-223-6-19
GGCCAAAGCCCCGGAAGGTTAACCCCCC
8._GC-08-223-6-19
GGCCAAAGCCCCGGAAGGTTAACCCCCC
9._GC-08-223-6-19
GGCCAAAGCCCCGGAAGGTTAACCCCCC
10._GC-08-223-6-19
GGCCAAAGCCCCGGAAGGTTAACCCCCC
11._GC-08-223-6-19
GGCCAAAGCCCCGGAAGGTTAACCCCCC
12._GC-08-224-6-20
GGCCAAAGCCCCGGAAGGTTAACCCCCC
13._GC-08-224-6-20
GGCCAAAGCCCCGGAAGGTTAACCCCCC
14._GC-08-224-6-20
GGCCAAAGCCCCGGAAGGTTAACCCCCC
15._GC-01-073-4-09
GGCCAAAGCCCCGGAAGGTTAACCCCCC
16._GC-08-223-6-19
GGCCAAAGCCCCGGAAGGTTAACCCCCC
17._GC-08-224-6-20
GGCCAAAGCCCCGGAAGGTTAACCCCCC
18._GU_144_/C
GGCC__________AAGG____CCCCCC
19._GU_144_/C
GGCC__________AAGG____CCCCCC
20._GU_144_/C
GGCC__________AAGG____CCCCCC
21._GU_144_/C
GGCC__________AAGG____CCCCCC
22._GU_144_/C
GGCC__________AAGG____CCCCCC
23._GU_144_/C
GGCC__________AAGG____CCCCCC
24._GU_144_/C
GGCC__________AAGG____CCCCCC
25._GU_144_/C
GGCC__________AAGG____CCCCCC
26._GU_144_/C
GGCC__________AAGG____CCCCCC
27._GU_144_/C
GGCC__________AAGG____CCCCCC
28._GU_144_/C
GGCC__________AAGG____CCCCCC
29._GU_144_/C
GGCC__________AAGG____CCCCCC
30._GU_144_/C
GGCC__________AAGG____CCCCCC
31._GU_144_/C
GGCC__________AAGG____CCCCCC
32._GU_144_/C
GGCC__________AAGG____CCCCCC
33._GU_144_/C
GGCC__________AAGG____CCCCCC
34._GU_144_/C
GGCC__________AAGG____CCCCCC
35._GU_144_/C
GGCC__________AAGG____CCCCCC
36._RUQ_191
AGCC__________AAGG____CCCCCC
37._RUQ_191
______________AAGG__AACC____
38._GC-01-073-4-09
GGCCAAAGCCCCGGAACGTTAACCCTCC
39._GC-01-073-4-09
GGCCAAAGCCCCGGAACGTTAACCCTCC
40._GC-08-224-6-20
GGCCAAAGCCCCGGAACGTTAACCCTCC
41._GU_144_/C
GGCC__________AACG____CCCTCC
42._GU_144_/C
GGCC__________AACG____CCCTCC
43._GU_144_/C
GGCC__________AACG____CCCTCC
44._RUQ_191
AG____________AAGG__AA____CC
45._GC-08-223-6-19
GGTTCCAGCCAAAACCGGATAATTTTTT
46._GC-08-224-6-20
AACCACAGCCCCAAACCCAACCTTCCCC
47._GU_144_/C
AACC__________ACCC____TTCCCC
48._GU_144_/C
GGTT__________CCGG____TTTTTT
49._GC-01-73-4-9
__GGAAAGCCCC__AACCTTAAGGGG__
50._GC-01-73-4-9
__GGAAAGCCCC__AACCTTAAGGGG__
51._RUQ_191
__GGAAAGCCCC__AACCTTAAGGGG__
52._MITC-000578
__GGAAAGCCCC__AACCTTAAGGGG__
53._MITC-000615
__GGAAAGCCCC__AACCTTAAGGGG__
54._GC-01-73-4-9
__GGAAAGCCCC__AACGTTAAGGAG__
 85 86 87 88 89 90 91 92       
_Input profile
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
1._GC-01-073-4-09
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
2._GC-01-073-4-09
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
3._GC-01-073-4-09
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
4._GC-01-073-4-09
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
5._GC-01-073-4-09
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
6._GC-01-073-4-09
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
7._GC-08-223-6-19
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
8._GC-08-223-6-19
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
9._GC-08-223-6-19
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
10._GC-08-223-6-19
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
11._GC-08-223-6-19
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
12._GC-08-224-6-20
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
13._GC-08-224-6-20
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
14._GC-08-224-6-20
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
15._GC-01-073-4-09
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
16._GC-08-223-6-19
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
17._GC-08-224-6-20
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
18._GU_144_/C
__GG__CCTTTT____X_XX_XX_XX_XX_XX_X
19._GU_144_/C
__GG__CCTTTT____X_XX_XX_XX_XX_XX_X
20._GU_144_/C
__GG__CCTTTT____X_XX_XX_XX_XX_XX_X
21._GU_144_/C
__GG__CCTTTT____X_XX_XX_XX_XX_XX_X
22._GU_144_/C
__GG__CCTTTT____X_XX_XX_XX_XX_XX_X
23._GU_144_/C
__GG__CCTTTT____X_XX_XX_XX_XX_XX_X
24._GU_144_/C
__GG__CCTTTT____X_XX_XX_XX_XX_XX_X
25._GU_144_/C
__GG__CCTTTT____X_XX_XX_XX_XX_XX_X
26._GU_144_/C
__GG__CCTTTT____X_XX_XX_XX_XX_XX_X
27._GU_144_/C
__GG__CCTTTT____X_XX_XX_XX_XX_XX_X
28._GU_144_/C
__GG__CCTTTT____X_XX_XX_XX_XX_XX_X
29._GU_144_/C
__GG__CCTTTT____X_XX_XX_XX_XX_XX_X
30._GU_144_/C
__GG__CCTTTT____X_XX_XX_XX_XX_XX_X
31._GU_144_/C
__GG__CCTTTT____X_XX_XX_XX_XX_XX_X
32._GU_144_/C
__GG__CCTTTT____X_XX_XX_XX_XX_XX_X
33._GU_144_/C
__GG__CCTTTT____X_XX_XX_XX_XX_XX_X
34._GU_144_/C
__GG__CCTTTT____X_XX_XX_XX_XX_XX_X
35._GU_144_/C
__GG__CCTTTT____X_XX_XX_XX_XX_XX_X
36._RUQ_191
__GG__CCTTTT____X_XX_XX_XX_XX_XX_X
37._RUQ_191
__GGCCCCTT______X_XX_XX_XX_XX_XX_X
38._GC-01-073-4-09
CCAGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
39._GC-01-073-4-09
CCAGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
40._GC-08-224-6-20
CCAGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
41._GU_144_/C
__AG__CCTTTT____X_XX_XX_XX_XX_XX_X
42._GU_144_/C
__AG__CCTTTT____X_XX_XX_XX_XX_XX_X
43._GU_144_/C
__AG__CCTTTT____X_XX_XX_XX_XX_XX_X
44._RUQ_191
____CC__TT______X_XX_XX_XX_XX_XX_X
45._GC-08-223-6-19
CCAACTCCTTCTAAGGX_XX_XX_XX_XX_XX_X
46._GC-08-224-6-20
CTAGCTTTGTCTTTGGX_XX_XX_XX_XX_XX_X
47._GU_144_/C
__AG__TTGTCT____X_XX_XX_XX_XX_XX_X
48._GU_144_/C
__AA__CCTTCT____X_XX_XX_XX_XX_XX_X
49._GC-01-73-4-9
GG____GGAAAATTGGX_XX_XX_XX_XX_XX_X
50._GC-01-73-4-9
GG____GGAAAATTGGX_XX_XX_XX_XX_XX_X
51._RUQ_191
GG____GGAAAATTGGX_XX_XX_XX_XX_XX_X
52._MITC-000578
GG____GGAAAATTGGX_XX_XX_XX_XX_XX_X
53._MITC-000615
GG____GGAAAATTGGX_XX_XX_XX_XX_XX_X
54._GC-01-73-4-9
GG____GGAAAATTGGX_XX_XX_XX_XX_XX_X

Input profile: GU_144_/C GC-01-073-4-09

 
 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

1._GU_144_/C GC-01-073-4-09

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

2._GU_144_/C GC-01-073-4-09

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5 > FP4
 Mars, 2018

3._GU_144_/C GC-01-073-4-09

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

4._GU_144_/C GC-01-073-4-09

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

5._GU_144_/C GC-01-073-4-09

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

6._GU_144_/C GC-01-073-4-09

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

7._GU_144_/C GC-08-223-6-19

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

8._GU_144_/C GC-08-223-6-19

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP3
 Mars, 2018

9._GU_144_/C GC-08-223-6-19

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

10._GU_144_/C GC-08-223-6-19

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

11._GU_144_/C GC-08-223-6-19

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

12._GU_144_/C GC-08-224-6-20

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

13._GU_144_/C GC-08-224-6-20

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

14._GU_144_/C GC-08-224-6-20

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

15._GU_144_/C GC-01-073-4-09

identical
91 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12 > FP3
 Mars, 2018

16._GU_144_/C GC-08-223-6-19

identical
91 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

17._GU_144_/C GC-08-224-6-20

identical
91 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

18._GU_144_/C

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1409 2
 Dapeng Zhang, 2016

19._GU_144_/C

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1409 6
 Dapeng Zhang, 2016

20._GU_144_/C

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8620 8
 Dapeng Zhang, 2016

21._GU_144_/C

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8620 3
 Dapeng Zhang, 2016

22._GU_144_/C

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8620 2
 Dapeng Zhang, 2016

23._GU_144_/C

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8620 1
 Dapeng Zhang, 2016

24._GU_144_/C

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8619 3 > FP
 Dapeng Zhang, 2016

25._GU_144_/C

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8619 10
 Dapeng Zhang, 2016

26._GU_144_/C

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8619 9
 Dapeng Zhang, 2016

27._GU_144_/C

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8619 7
 Dapeng Zhang, 2016

28._GU_144_/C

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8619 5
 Dapeng Zhang, 2016

29._GU_144_/C

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8619 2
 Dapeng Zhang, 2016

30._GU_144_/C

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1409 5 > FP
 Dapeng Zhang, 2016

31._GU_144_/C

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1409 12 > F
 Dapeng Zhang, 2016

32._GU_144_/C

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1409 1 > FP
 Dapeng Zhang, 2016

33._GU_144_/C

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1409 13
 Dapeng Zhang, 2016

34._GU_144_/C

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1409 10
 Dapeng Zhang, 2016

35._GU_144_/C

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1409 8
 Dapeng Zhang, 2016

36._GU_144_/C RUQ_191

98.7 %
39 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

37._GU_144_/C RUQ_191

96.4 %
42 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

38._GU_144_/C GC-01-073-4-09

94 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

39._GU_144_/C GC-01-073-4-09

94 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

40._GU_144_/C GC-08-224-6-20

94 %
91 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

41._GU_144_/C

89.7 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8620 7
 Dapeng Zhang, 2016

42._GU_144_/C

89.7 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1409 9
 Dapeng Zhang, 2016

43._GU_144_/C

89.7 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1409 3
 Dapeng Zhang, 2016

44._GU_144_/C RUQ_191

88.1 %
21 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 
View Data
GU
0.997

45._GU_144_/C GC-08-223-6-19

63.2 %
91 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP2
 Mars, 2018

46._GU_144_/C GC-08-224-6-20

58.7 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

47._GU_144_/C

51.3 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8620 5
 Dapeng Zhang, 2016

48._GU_144_/C

50 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8619 1 > FP
 Dapeng Zhang, 2016

49._GU_144_/C GC-01-73-4-9

47.4 %
78 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 1 > FP1
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

50._GU_144_/C GC-01-73-4-9

47.4 %
78 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

51._GU_144_/C RUQ_191

47.4 %
78 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

52._GU_144_/C MITC-000578

47.4 %
78 shared markers

 View  View all  Clone  Any
USDA-SHRS, United States of America
 Mars, 2018

53._GU_144_/C MITC-000615

47.4 %
78 shared markers

 View  View all  Clone  Any
USDA-SHRS, United States of America
 Mars, 2018

54._GU_144_/C GC-01-73-4-9

44.2 %
78 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 3
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

 

  Key to SNP Markers

1TcSNP1075 2TcSNP534 3TcSNP591 4TcSNP42 5TcSNP418
6TcSNP702 7TcSNP1096 8TcSNP1060 9TcSNP1165 10TcSNP429
11TcSNP75 12TcSNP891 13TcSNP122 14TcSNP316 15TcSNP521
16TcSNP1062 17TcSNP836 18TcSNP878 19TcSNP929 20TcSNP413
21TcSNP653 22TcSNP1149 23TcSNP174 24TcSNP32 25TcSNP372
26TcSNP448 27TcSNP872 28TcSNP953 29TcSNP1034 30TcSNP1175
31TcSNP1111 32TcSNP577 33TcSNP90 34TcSNP998 35TcSNP150
36TcSNP28 37TcSNP751 38TcSNP1484 39TcSNP602 40TcSNP561
41TcSNP894 42TcSNP1063 43TcSNP1126 44TcSNP1270 45TcSNP606
46TcSNP329 47TcSNP689 48TcSNP944 49TcSNP1242 50TcSNP1383
51TcSNP547 52TcSNP776 53TcSNP1309 54TcSNP151 55TcSNP1520
56TcSNP799 57TcSNP899 58TcSNP226 59TcSNP1439 60TcSNP1442
61TcSNP193 62TcSNP25 63TcSNP364 64TcSNP144 65TcSNP230
66TcSNP560 67TcSNP723 68TcSNP731 69TcSNP701 70TcSNP1041
71TcSNP645 72TcSNP917 73Tcm003s01336581 74Tcm003s07402719 75Tcm001s00947643
76Tcm006s26664133 77Tcm002s20575712 78TcSNP529 79TcSNP1458 80TcSNP430
81TcSNP823 82TcSNP619 83TcSNP994 84TcSNP1144 85TcSNP1156
86TcSNP469 87TcSNP999 88TcSNP242 89TcSNP1253 90TcSNP1414
91TcSNP154 92TcSNP240