SNP Profiles of GU-144C   View Data

 Show/Hide Profiles

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
AACCCCGGGGTTCCCCCCGGTTCCTTAA
1._GU_144_/C___
AACCCCGGGGTTCCCCCCGGTTCCTTAA
2._GU_144_/C___
AACCCCGGGGTTCCCCCCGGTTCCTTAA
3._GU_144_/C___
AACCCCGGGGTTCCCCCCGGTTCCTTAA
4._GU_144_/C___
AACCCCGGGGTTCCCCCCGGTTCCTTAA
5._GU_144_/C___
AACCCCGGGGTTCCCCCCGGTTCCTTAA
6._GU_144_/C___
AACCCCGGGGTTCCCCCCGGTTCCTTAA
7._GU_144_/C___
AACCCCGGGGTTCCCCCCGGTTCCTTAA
8._GU_144_/C___
AACCCCGGGGTTCCCCCCGGTTCCTTAA
9._GU_144_/C___
AACCCCGGGGTTCCCCCCGGTTCCTTAA
10._GU_144_/C___
AACCCCGGGGTTCCCCCCGGTTCCTTAA
11._GU_144_/C___
AACCCCGGGGTTCCCCCCGGTTCCTTAA
12._GU_144_/C___
AACCCCGGGGTTCCCCCCGGTTCCTTAA
13._GU_144_/C___
AACCCCGGGGTTCCCCCCGGTTCCTTAA
14._GU_144_/C___
AACCCCGGGGTTCCCCCCGGTTCCTTAA
15._GU_144_/C___
AACCCCGGGGTTCCCCCCGGTTCCTTAA
16._GU_144_/C___
AACCCCGGGGTTCCCCCCGGTTCCTTAA
17._GU_144_/C___
AACCCCGGGGTTCCCCCCGGTTCCTTAA
18._GU_144_/C___
AACCCC________CCCCGG__CC____
19._GU_144_/C___
AACCCC________CCCCGG__CC____
20._GU_144_/C___
AACCCC________CCCCGG__CC____
21._GU_144_/C___
AACCCC________CCCCGG__CC____
22._GU_144_/C___
AACCCC________CCCCGG__CC____
23._GU_144_/C___
AACCCC________CCCCGG__CC____
24._GU_144_/C___
AACCCC________CCCCGG__CC____
25._GU_144_/C___
AACCCC________CCCCGG__CC____
26._GU_144_/C___
AACCCC________CCCCGG__CC____
27._GU_144_/C___
AACCCC________CCCCGG__CC____
28._GU_144_/C___
AACCCC________CCCCGG__CC____
29._GU_144_/C___
AACCCC________CCCCGG__CC____
30._GU_144_/C___
AACCCC________CCCCGG__CC____
31._GU_144_/C___
AACCCC________CCCCGG__CC____
32._GU_144_/C___
AACCCC________CCCCGG__CC____
33._GU_144_/C___
AACCCC________CCCCGG__CC____
34._GU_144_/C___
AACCCC________CCCCGG__CC____
35._GU_144_/C___
AACCCC________CCCCGG__CC____
36._GU_144_/C___
AACCCC________CCCCGG__CC____
37._GU_144_/C___
__CCCC____CC__CC____TTCC____
38._GU_144_/C___
AACCACGGGGCTCCCCCCGGTTCCTTAA
39._GU_144_/C___
AACCACGGGGCTCCCCCCGGTTCCTTAA
40._GU_144_/C___
AACCACGGGGCTCCCCCCGGTTCCTTAA
41._GU_144_/C___
AACCAC________CCCCGG__CC____
42._GU_144_/C___
AACCAC________CCCCGG__CC____
43._GU_144_/C___
AACCAC________CCCCGG__CC____
44._GU_144_/C___
____CC____CC________________
45._GU_144_/C___
ATTTACAGAGCTCTCCCCGGTTCCCTAA
46._GU_144_/C___
ATCTACAGAGCTCTCCCTAGTTCTTTAT
47._GU_144_/C___
ATCTAC________CCCTAG__CT____
48._GU_144_/C___
ATTTAC________CCCCGG__CC____
49._GU_144_/C___
AA__CCGGGG__GGGG__GGAAGGAATT
50._GU_144_/C___
AA__CCGGGG__GGGG__GGAAGGAATT
51._GU_144_/C___
AA__CCGGGG__GGGG__GGAAGGAATT
52._GU_144_/C___
AA__CCGGGG__GGGG__GGAAGGAATT
53._GU_144_/C___
AA__CCGGGG__GGGG__GGAAGGAATT
54._GU_144_/C___
AA__ACGGGG__GGGG__GGAAGGAATT
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
CCGGGGCCGGCTAATTGGAAAACCGGAA
1._GU_144_/C___
CCGGGGCCGGCTAATTGGAAAACCGGAA
2._GU_144_/C___
CCGGGGCCGGCTAATTGGAAAACCGGAA
3._GU_144_/C___
CCGGGGCCGGCTAATTGGAAAACCGGAA
4._GU_144_/C___
CCGGGGCCGGCTAATTGGAAAACCGGAA
5._GU_144_/C___
CCGGGGCCGGCTAATTGGAAAACCGGAA
6._GU_144_/C___
CCGGGGCCGGCTAATTGGAAAACCGGAA
7._GU_144_/C___
CCGGGGCCGGCTAATTGGAAAACCGGAA
8._GU_144_/C___
CCGGGGCCGGCTAATTGGAAAACCGGAA
9._GU_144_/C___
CCGGGGCCGGCTAATTGGAAAACCGGAA
10._GU_144_/C___
CCGGGGCCGGCTAATTGGAAAACCGGAA
11._GU_144_/C___
CCGGGGCCGGCTAATTGGAAAACCGGAA
12._GU_144_/C___
CCGGGGCCGGCTAATTGGAAAACCGGAA
13._GU_144_/C___
CCGGGGCCGGCTAATTGGAAAACCGGAA
14._GU_144_/C___
CCGGGGCCGGCTAATTGGAAAACCGGAA
15._GU_144_/C___
CCGGGGCCGGCTAA__GGAAAACCGGAA
16._GU_144_/C___
CCGGGGCCGGCTAATTGGAAAACCGGAA
17._GU_144_/C___
CCGGGGCCGGCTAATTGGAAAACCGGAA
18._GU_144_/C___
__GG____GG________AAAA__GGAA
19._GU_144_/C___
__GG____GG________AAAA__GGAA
20._GU_144_/C___
__GG____GG________AAAA__GGAA
21._GU_144_/C___
__GG____GG________AAAA__GGAA
22._GU_144_/C___
__GG____GG________AAAA__GGAA
23._GU_144_/C___
__GG____GG________AAAA__GGAA
24._GU_144_/C___
__GG____GG________AAAA__GGAA
25._GU_144_/C___
__GG____GG________AAAA__GGAA
26._GU_144_/C___
__GG____GG________AAAA__GGAA
27._GU_144_/C___
__GG____GG________AAAA__GGAA
28._GU_144_/C___
__GG____GG________AAAA__GGAA
29._GU_144_/C___
__GG____GG________AAAA__GGAA
30._GU_144_/C___
__GG____GG________AAAA__GGAA
31._GU_144_/C___
__GG____GG________AAAA__GGAA
32._GU_144_/C___
__GG____GG________AAAA__GGAA
33._GU_144_/C___
__GG____GG________AAAA__GGAA
34._GU_144_/C___
__GG____GG________AAAA__GGAA
35._GU_144_/C___
__GG____GG________AAAA__GGAA
36._GU_144_/C___
__GG____GG________AAAA__GGAA
37._GU_144_/C___
______CC________GG__AACCGG__
38._GU_144_/C___
CCGGGGCCGGTTAATTGGTTAACCGGAA
39._GU_144_/C___
CCGGGGCCGGTTAATTGGTTAACCGGAA
40._GU_144_/C___
CCGGGG__GGTTAATTGGTTAACCGGAA
41._GU_144_/C___
__GG____GG________TTAA__GGAA
42._GU_144_/C___
__GG____GG________TTAA__GGAA
43._GU_144_/C___
__GG____GG________TTAA__GGAA
44._GU_144_/C___
__GGCT__________________GG__
45._GU_144_/C___
CCAACGCCCCCCAATTGGATAACGGGAA
46._GU_144_/C___
AAGGCGCGCGCTAACTGGATAACGCCAT
47._GU_144_/C___
__GG____CG________ATAA__CCAT
48._GU_144_/C___
__AA____CC________ATAA__GGAA
49._GU_144_/C___
CCGGCC__GGAGGGAAGGAAAAGGCCAA
50._GU_144_/C___
CCGGCC__GGAGGGAAGGAAAAGGCCAA
51._GU_144_/C___
CCGGCC__GGAGGGAAGGAAAAGGCCAA
52._GU_144_/C___
CCGGCC__GGAGGGAAGGAAAAGGCCAA
53._GU_144_/C___
CCGGCC__GGAGGGAAGGAAAAGGCCAA
54._GU_144_/C___
CCGGCC__GGAAGGAAGGTTAAGGCCAA
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
TTTTGGCCCCAATTGGGGGGCCAGCCGG
1._GU_144_/C___
TTTTGGCCCCAATTGGGGGGCCAGCCGG
2._GU_144_/C___
TTTTGGCCCCAATTGGGGGGCCAGCCGG
3._GU_144_/C___
TTTTGGCCCCAATTGGGGGGCCAGCCGG
4._GU_144_/C___
TTTTGGCCCCAATTGGGGGGCCAGCCGG
5._GU_144_/C___
TTTTGGCCCCAATTGGGGGGCCAGCCGG
6._GU_144_/C___
TTTTGGCCCCAATTGGGGGGCCAGCCGG
7._GU_144_/C___
TTTTGGCCCCAATTGGGGGGCCAGCCGG
8._GU_144_/C___
TTTTGGCCCCAATTGGGGGGCCAGCCGG
9._GU_144_/C___
TTTTGGCCCCAATTGGGGGGCCAGCCGG
10._GU_144_/C___
TTTTGGCCCCAATTGGGGGGCCAGCCGG
11._GU_144_/C___
TTTTGGCCCCAATTGGGGGGCCAGCCGG
12._GU_144_/C___
TTTTGGCCCCAATTGGGGGGCCAGCCGG
13._GU_144_/C___
TTTTGGCCCCAATTGGGGGGCCAGCCGG
14._GU_144_/C___
TTTTGGCCCCAATTGGGGGGCCAGCCGG
15._GU_144_/C___
TTTTGGCCCCAATTGGGGGGCCAGCCGG
16._GU_144_/C___
TTTTGGCCCCAATTGGGGGGCCAGCCGG
17._GU_144_/C___
TTTTGGCCCCAATTGGGGGG__AGCCGG
18._GU_144_/C___
______CC__AATT____GG________
19._GU_144_/C___
______CC__AATT____GG________
20._GU_144_/C___
______CC__AATT____GG________
21._GU_144_/C___
______CC__AATT____GG________
22._GU_144_/C___
______CC__AATT____GG________
23._GU_144_/C___
______CC__AATT____GG________
24._GU_144_/C___
______CC__AATT____GG________
25._GU_144_/C___
______CC__AATT____GG________
26._GU_144_/C___
______CC__AATT____GG________
27._GU_144_/C___
______CC__AATT____GG________
28._GU_144_/C___
______CC__AATT____GG________
29._GU_144_/C___
______CC__AATT____GG________
30._GU_144_/C___
______CC__AATT____GG________
31._GU_144_/C___
______CC__AATT____GG________
32._GU_144_/C___
______CC__AATT____GG________
33._GU_144_/C___
______CC__AATT____GG________
34._GU_144_/C___
______CC__AATT____GG________
35._GU_144_/C___
______CC__AATT____GG________
36._GU_144_/C___
______CC__AATT____GG________
37._GU_144_/C___
____GGCCCCAATT____GGCC____GG
38._GU_144_/C___
TTTTGGCCCCGGTTGGGGGGCCGGCCGG
39._GU_144_/C___
TTTTGGCCCCGGTTGGGGGGCCGGCCGG
40._GU_144_/C___
TTTTGGCCCCGGTTGGGGGGCCGGCCGG
41._GU_144_/C___
______CC__GGTT____GG________
42._GU_144_/C___
______CC__GGTT____GG________
43._GU_144_/C___
______CC__GGTT____GG________
44._GU_144_/C___
______CC__AA________CC______
45._GU_144_/C___
TTGTGGCCCCGGGTGTTTAACTAGCCGG
46._GU_144_/C___
TTGTGGGGCCAGGGGTTTAACCGGCCGG
47._GU_144_/C___
______GG__AGGG____AA________
48._GU_144_/C___
______CC__GGGT____AA________
49._GU_144_/C___
AAAAGGCCCCAAAACCCCGGGGAGGGCC
50._GU_144_/C___
AAAAGGCCCCAAAACCCCGGGGAGGGCC
51._GU_144_/C___
AAAAGGCCCCAAAACCCCGGGGAGGGCC
52._GU_144_/C___
AAAAGGCCCCAAAACCCCGGGGAGGGCC
53._GU_144_/C___
AAAAGGCCCCAAAACCCCGGGGAGGGCC
54._GU_144_/C___
AAAAGGCCCCGGAACCCCGGGGGGGGCC
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
TTTTAAGGAACCCCGGGGTTTTTTCCTT
1._GU_144_/C___
TTTTAAGGAACCCCGGGGTTTTTTCCTT
2._GU_144_/C___
TTTTAAGGAACCCCGGGGTTTTTTCCTT
3._GU_144_/C___
TTTTAAGGAACCCCGGGGTTTTTTCCTT
4._GU_144_/C___
TTTTAAGGAACCCCGGGGTTTTTTCCTT
5._GU_144_/C___
TTTTAAGGAACCCCGGGGTTTTTTCCTT
6._GU_144_/C___
TTTTAAGGAACCCCGGGGTTTTTTCCTT
7._GU_144_/C___
TTTTAAGGAACCCCGGGGTTTTTTCCTT
8._GU_144_/C___
TTTTAAGGAACCCCGGGGTTTTTTCCTT
9._GU_144_/C___
TTTTAAGGAACCCCGGGGTTTTTTCCTT
10._GU_144_/C___
TTTTAAGGAACCCCGGGGTTTTTTCCTT
11._GU_144_/C___
TTTTAAGGAACCCCGGGGTTTTTTCCTT
12._GU_144_/C___
TTTTAAGGAACCCCGGGGTTTTTTCCTT
13._GU_144_/C___
TTTTAAGGAACCCCGGGGTTTTTTCCTT
14._GU_144_/C___
TTTTAAGGAACCCCGGGGTTTTTTCCTT
15._GU_144_/C___
TTTTAAGGAACCCCGGGGTTTTTTCCTT
16._GU_144_/C___
TTTTAAGGAACCCCGGGGTTTTTTCC__
17._GU_144_/C___
TTTTAAGGAACCCCGGGGTTTTTTCCTT
18._GU_144_/C___
__TT__________________TTCC__
19._GU_144_/C___
__TT__________________TTCC__
20._GU_144_/C___
__TT__________________TTCC__
21._GU_144_/C___
__TT__________________TTCC__
22._GU_144_/C___
__TT__________________TTCC__
23._GU_144_/C___
__TT__________________TTCC__
24._GU_144_/C___
__TT__________________TTCC__
25._GU_144_/C___
__TT__________________TTCC__
26._GU_144_/C___
__TT__________________TTCC__
27._GU_144_/C___
__TT__________________TTCC__
28._GU_144_/C___
__TT__________________TTCC__
29._GU_144_/C___
__TT__________________TTCC__
30._GU_144_/C___
__TT__________________TTCC__
31._GU_144_/C___
__TT__________________TTCC__
32._GU_144_/C___
__TT__________________TTCC__
33._GU_144_/C___
__TT__________________TTCC__
34._GU_144_/C___
__TT__________________TTCC__
35._GU_144_/C___
__TT__________________TTCC__
36._GU_144_/C___
__TT__________________TTCC__
37._GU_144_/C___
TT____GG____________CTTT__TT
38._GU_144_/C___
TTTTAAGGAACCCCGGGGTTTTTTCCTT
39._GU_144_/C___
TTTTAAGGAACCCCGGGGTTTTTTCCTT
40._GU_144_/C___
TTTTAAGGAACCCCGGGGTTTTTTCCTT
41._GU_144_/C___
__TT__________________TTCC__
42._GU_144_/C___
__TT__________________TTCC__
43._GU_144_/C___
__TT__________________TTCC__
44._GU_144_/C___
______GG____________________
45._GU_144_/C___
TTCCAAGGAACCCCGGGGGTTT__TTTT
46._GU_144_/C___
TTTTAGAGAACCAAAGAGGGTTTTCCTT
47._GU_144_/C___
__TT__________________TTCC__
48._GU_144_/C___
__CC____________________TT__
49._GU_144_/C___
__AA__GGAAGG__GGGGAAAGAAGGAA
50._GU_144_/C___
__AA__GGAAGG__GGGGAAAGAAGGAA
51._GU_144_/C___
__AA__GGAAGG__GGGGAAAGAAGGAA
52._GU_144_/C___
__AA__GGAAGG__GGGGAAAGAAGGAA
53._GU_144_/C___
__AA__GGAAGG__GGGGAAAGAAGGAA
54._GU_144_/C___
__AA__GGAAGG__GGGGAAAGAAGGAA
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
GGCCCCCCAAGGGGAAGGGGGGAACCCC
1._GU_144_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
2._GU_144_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
3._GU_144_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
4._GU_144_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
5._GU_144_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
6._GU_144_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
7._GU_144_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
8._GU_144_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
9._GU_144_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
10._GU_144_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
11._GU_144_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
12._GU_144_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
13._GU_144_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
14._GU_144_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
15._GU_144_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
16._GU_144_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
17._GU_144_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
18._GU_144_/C___
__CC__CCAAGG__AAGGGGGG______
19._GU_144_/C___
__CC__CCAAGG__AAGGGGGG______
20._GU_144_/C___
__CC__CCAAGG__AAGGGGGG______
21._GU_144_/C___
__CC__CCAAGG__AAGGGGGG______
22._GU_144_/C___
__CC__CCAAGG__AAGGGGGG______
23._GU_144_/C___
__CC__CCAAGG__AAGGGGGG______
24._GU_144_/C___
__CC__CCAAGG__AAGGGGGG______
25._GU_144_/C___
__CC__CCAAGG__AAGGGGGG______
26._GU_144_/C___
__CC__CCAAGG__AAGGGGGG______
27._GU_144_/C___
__CC__CCAAGG__AAGGGGGG______
28._GU_144_/C___
__CC__CCAAGG__AAGGGGGG______
29._GU_144_/C___
__CC__CCAAGG__AAGGGGGG______
30._GU_144_/C___
__CC__CCAAGG__AAGGGGGG______
31._GU_144_/C___
__CC__CCAAGG__AAGGGGGG______
32._GU_144_/C___
__CC__CCAAGG__AAGGGGGG______
33._GU_144_/C___
__CC__CCAAGG__AAGGGGGG______
34._GU_144_/C___
__CC__CCAAGG__AAGGGGGG______
35._GU_144_/C___
__CC__CCAAGG__AAGGGGGG______
36._GU_144_/C___
__CC__CCAAGG__AAGGGGGG______
37._GU_144_/C___
__CCCCCCAA__GGAAGGGGGGAA____
38._GU_144_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
39._GU_144_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
40._GU_144_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
41._GU_144_/C___
__CC__CCAAGG__AAGGGGGG______
42._GU_144_/C___
__CC__CCAAGG__AAGGGGGG______
43._GU_144_/C___
__CC__CCAAGG__AAGGGGGG______
44._GU_144_/C___
GG____________AAGG__GGAA____
45._GU_144_/C___
AACCCTCCACCGGGACAATTGGGGTTCC
46._GU_144_/C___
GGCCCCTTACCGGGCCAAGGGGAGTTCC
47._GU_144_/C___
__CC__TTACCG__CCAAGGGG______
48._GU_144_/C___
__CC__CCACCG__ACAATTGG______
49._GU_144_/C___
GGGGGGGGAAGGGGAAGGCCCCAA____
50._GU_144_/C___
GGGGGGGGAAGGGGAAGGCCCCAA____
51._GU_144_/C___
GGGGGGGGAAGGGGAAGGCCCCAA____
52._GU_144_/C___
GGGGGGGGAAGGGGAAGGCCCCAA____
53._GU_144_/C___
GGGGGGGGAAGGGGAAGGCCCCAA____
54._GU_144_/C___
GGGGGGGGAAGGGGAAGGCCCCAA____
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
_Input profile
GGCCAAAGCCCCGGAAGGCCTTAACCCC
1._GU_144_/C___
GGCCAAAGCCCCGGAAGGCCTTAACCCC
2._GU_144_/C___
GGCCAAAGCCCCGGAAGGCCTTAACCCC
3._GU_144_/C___
GGCCAAAGCCCCGGAAGGCCTTAACCCC
4._GU_144_/C___
GGCCAAAGCCCCGGAAGGCCTTAACCCC
5._GU_144_/C___
GGCCAAAGCCCCGGAAGGCCTTAACCCC
6._GU_144_/C___
GGCCAAAGCCCCGGAAGGCCTTAACCCC
7._GU_144_/C___
GGCCAAAGCCCCGGAAGGCCTTAACCCC
8._GU_144_/C___
GGCCAAAGCCCCGGAAGGCCTTAACCCC
9._GU_144_/C___
GGCCAAAGCCCCGGAAGGCCTTAACCCC
10._GU_144_/C___
GGCCAAAGCCCCGGAAGGCCTTAACCCC
11._GU_144_/C___
GGCCAAAGCCCCGGAAGGCCTTAACCCC
12._GU_144_/C___
GGCCAAAGCCCCGGAAGGCCTTAACCCC
13._GU_144_/C___
GGCCAAAGCCCCGGAAGGCCTTAACCCC
14._GU_144_/C___
GGCCAAAGCCCCGGAAGG__TTAACCCC
15._GU_144_/C___
GGCCAAAGCCCCGGAAGGCCTTAACCCC
16._GU_144_/C___
GGCCAAAGCCCCGGAAGGCCTTAACCCC
17._GU_144_/C___
GGCCAAAGCCCCGGAAGGCCTTAACCCC
18._GU_144_/C___
GGCC__________AAGG______CCCC
19._GU_144_/C___
GGCC__________AAGG______CCCC
20._GU_144_/C___
GGCC__________AAGG______CCCC
21._GU_144_/C___
GGCC__________AAGG______CCCC
22._GU_144_/C___
GGCC__________AAGG______CCCC
23._GU_144_/C___
GGCC__________AAGG______CCCC
24._GU_144_/C___
GGCC__________AAGG______CCCC
25._GU_144_/C___
GGCC__________AAGG______CCCC
26._GU_144_/C___
GGCC__________AAGG______CCCC
27._GU_144_/C___
GGCC__________AAGG______CCCC
28._GU_144_/C___
GGCC__________AAGG______CCCC
29._GU_144_/C___
GGCC__________AAGG______CCCC
30._GU_144_/C___
GGCC__________AAGG______CCCC
31._GU_144_/C___
GGCC__________AAGG______CCCC
32._GU_144_/C___
GGCC__________AAGG______CCCC
33._GU_144_/C___
GGCC__________AAGG______CCCC
34._GU_144_/C___
GGCC__________AAGG______CCCC
35._GU_144_/C___
GGCC__________AAGG______CCCC
36._GU_144_/C___
AGCC__________AAGG______CCCC
37._GU_144_/C___
______________AAGG____AACC__
38._GU_144_/C___
GGCCAAAGCCCCGGAACGCCTTAACCCT
39._GU_144_/C___
GGCCAAAGCCCCGGAACGCCTTAACCCT
40._GU_144_/C___
GGCCAAAGCCCCGGAACGCCTTAACCCT
41._GU_144_/C___
GGCC__________AACG______CCCT
42._GU_144_/C___
GGCC__________AACG______CCCT
43._GU_144_/C___
GGCC__________AACG______CCCT
44._GU_144_/C___
AG____________AAGG____AA____
45._GU_144_/C___
GGTTCCAGCCAAAACCGGCCATAATTTT
46._GU_144_/C___
AACCACAGCCCCAAACCCCCAACCTTCC
47._GU_144_/C___
AACC__________ACCC______TTCC
48._GU_144_/C___
GGTT__________CCGG______TTTT
49._GU_144_/C___
__GGAAAGCCCC__AACCGGTTAAGGGG
50._GU_144_/C___
__GGAAAGCCCC__AACCGGTTAAGGGG
51._GU_144_/C___
__GGAAAGCCCC__AACCGGTTAAGGGG
52._GU_144_/C___
__GGAAAGCCCC__AACCGGTTAAGGGG
53._GU_144_/C___
__GGAAAGCCCC__AACCGGTTAAGGGG
54._GU_144_/C___
__GGAAAGCCCC__AACGGGTTAAGGAG
 85 86 87 88 89 90 91 92 93      
_Input profile
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
1._GU_144_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
2._GU_144_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
3._GU_144_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
4._GU_144_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
5._GU_144_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
6._GU_144_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
7._GU_144_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
8._GU_144_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
9._GU_144_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
10._GU_144_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
11._GU_144_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
12._GU_144_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
13._GU_144_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
14._GU_144_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
15._GU_144_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
16._GU_144_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
17._GU_144_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
18._GU_144_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
19._GU_144_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
20._GU_144_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
21._GU_144_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
22._GU_144_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
23._GU_144_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
24._GU_144_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
25._GU_144_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
26._GU_144_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
27._GU_144_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
28._GU_144_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
29._GU_144_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
30._GU_144_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
31._GU_144_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
32._GU_144_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
33._GU_144_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
34._GU_144_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
35._GU_144_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
36._GU_144_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
37._GU_144_/C___
____GGCCCCTT______X_XX_XX_XX_XX_X
38._GU_144_/C___
CCCCAGCCCCTTTTAAGGX_XX_XX_XX_XX_X
39._GU_144_/C___
CCCCAGCCCCTTTTAAGGX_XX_XX_XX_XX_X
40._GU_144_/C___
CCCCAGCCCCTTTTAAGGX_XX_XX_XX_XX_X
41._GU_144_/C___
CC__AG__CCTTTT____X_XX_XX_XX_XX_X
42._GU_144_/C___
CC__AG__CCTTTT____X_XX_XX_XX_XX_X
43._GU_144_/C___
CC__AG__CCTTTT____X_XX_XX_XX_XX_X
44._GU_144_/C___
CC____CC__TT______X_XX_XX_XX_XX_X
45._GU_144_/C___
TTCCAACTCCTTCTAAGGX_XX_XX_XX_XX_X
46._GU_144_/C___
CCCTAGCTTTGTCTTTGGX_XX_XX_XX_XX_X
47._GU_144_/C___
CC__AG__TTGTCT____X_XX_XX_XX_XX_X
48._GU_144_/C___
TT__AA__CCTTCT____X_XX_XX_XX_XX_X
49._GU_144_/C___
__GG____GGAAAATTGGX_XX_XX_XX_XX_X
50._GU_144_/C___
__GG____GGAAAATTGGX_XX_XX_XX_XX_X
51._GU_144_/C___
__GG____GGAAAATTGGX_XX_XX_XX_XX_X
52._GU_144_/C___
__GG____GGAAAATTGGX_XX_XX_XX_XX_X
53._GU_144_/C___
__GG____GGAAAATTGGX_XX_XX_XX_XX_X
54._GU_144_/C___
__GG____GGAAAATTGGX_XX_XX_XX_XX_X

Input profile: GU_144_/C GC-01-073-4-09

 
Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

1._GU_144_/C GC-01-073-4-09

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

2._GU_144_/C GC-01-073-4-09

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

3._GU_144_/C GC-01-073-4-09

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5 > FP4
 Mars, 2018

4._GU_144_/C GC-01-073-4-09

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

5._GU_144_/C GC-01-073-4-09

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

6._GU_144_/C GC-08-223-6-19

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

7._GU_144_/C GC-08-223-6-19

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP3
 Mars, 2018

8._GU_144_/C GC-08-223-6-19

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

9._GU_144_/C GC-08-223-6-19

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

10._GU_144_/C GC-08-223-6-19

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

11._GU_144_/C GC-08-224-6-20

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

12._GU_144_/C GC-08-224-6-20

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

13._GU_144_/C GC-08-224-6-20

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

14._GU_144_/C GC-01-073-4-09

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

15._GU_144_/C GC-01-073-4-09

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12 > FP3
 Mars, 2018

16._GU_144_/C GC-08-223-6-19

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

17._GU_144_/C GC-08-224-6-20

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

18._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 2
 Dapeng Zhang, 2016

19._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 6
 Dapeng Zhang, 2016

20._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8620 8
 Dapeng Zhang, 2016

21._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8620 3
 Dapeng Zhang, 2016

22._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8620 2
 Dapeng Zhang, 2016

23._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8620 1
 Dapeng Zhang, 2016

24._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8619 3 > FP
 Dapeng Zhang, 2016

25._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8619 10
 Dapeng Zhang, 2016

26._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8619 9
 Dapeng Zhang, 2016

27._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8619 7
 Dapeng Zhang, 2016

28._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8619 5
 Dapeng Zhang, 2016

29._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8619 2
 Dapeng Zhang, 2016

30._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 5 > FP
 Dapeng Zhang, 2016

31._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 12 > F
 Dapeng Zhang, 2016

32._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 1 > FP
 Dapeng Zhang, 2016

33._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 13
 Dapeng Zhang, 2016

34._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 10
 Dapeng Zhang, 2016

35._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 8
 Dapeng Zhang, 2016

36._GU_144_/C RUQ_191

98.7 %
39 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

37._GU_144_/C RUQ_191

96.4 %
42 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

38._GU_144_/C GC-01-073-4-09

94.1 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

39._GU_144_/C GC-01-073-4-09

94.1 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

40._GU_144_/C GC-08-224-6-20

94 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

41._GU_144_/C

89.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8620 7
 Dapeng Zhang, 2016

42._GU_144_/C

89.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 9
 Dapeng Zhang, 2016

43._GU_144_/C

89.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 3
 Dapeng Zhang, 2016

44._GU_144_/C RUQ_191

88.1 %
21 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

45._GU_144_/C GC-08-223-6-19

63.6 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP2
 Mars, 2018

46._GU_144_/C GC-08-224-6-20

59.1 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

47._GU_144_/C

51.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8620 5
 Dapeng Zhang, 2016

48._GU_144_/C

50 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8619 1 > FP
 Dapeng Zhang, 2016

49._GU_144_/C GC-01-73-4-9

46.8 %
79 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 1 > FP1
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

50._GU_144_/C GC-01-73-4-9

46.8 %
79 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

51._GU_144_/C RUQ_191

46.8 %
79 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

52._GU_144_/C MITC-000578

46.8 %
79 shared markers

USDA-SHRS, United States of America
 Mars, 2018

53._GU_144_/C MITC-000615

46.8 %
79 shared markers

USDA-SHRS, United States of America
 Mars, 2018

54._GU_144_/C GC-01-73-4-9

43.7 %
79 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 3
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1075 2TcSNP534 3TcSNP591 4TcSNP42 5TcSNP418
6TcSNP702 7TcSNP1096 8TcSNP1060 9TcSNP1165 10TcSNP429
11TcSNP75 12TcSNP891 13TcSNP122 14TcSNP316 15TcSNP521
16TcSNP1062 17TcSNP836 18TcSNP878 19TcSNP929 20TcSNP413
21TcSNP653 22TcSNP1149 23TcSNP174 24TcSNP32 25TcSNP372
26TcSNP448 27TcSNP872 28TcSNP953 29TcSNP1034 30TcSNP1175
31TcSNP1111 32TcSNP577 33TcSNP90 34TcSNP998 35TcSNP150
36TcSNP28 37TcSNP751 38TcSNP1484 39TcSNP602 40TcSNP561
41TcSNP894 42TcSNP1063 43TcSNP1126 44TcSNP1270 45TcSNP606
46TcSNP329 47TcSNP689 48TcSNP944 49TcSNP1242 50TcSNP1383
51TcSNP547 52TcSNP776 53TcSNP1309 54TcSNP151 55TcSNP1520
56TcSNP799 57TcSNP899 58TcSNP226 59TcSNP1439 60TcSNP1442
61TcSNP193 62TcSNP25 63TcSNP364 64TcSNP144 65TcSNP230
66TcSNP560 67TcSNP723 68TcSNP731 69TcSNP701 70TcSNP1041
71TcSNP645 72TcSNP917 73Tcm003s01336581 74Tcm003s07402719 75Tcm001s00947643
76Tcm006s26664133 77Tcm002s20575712 78TcSNP529 79TcSNP1458 80TcSNP60
81TcSNP430 82TcSNP823 83TcSNP619 84TcSNP994 85TcSNP1144
86TcSNP1156 87TcSNP469 88TcSNP999 89TcSNP242 90TcSNP1253
91TcSNP1414 92TcSNP154 93TcSNP240