SNP Profiles of PA 107 [PER]   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
AACCCTCCAGGGCTCCCCCCGGTTCCTT
1._GC-02-001-1-01
AACCCTCCAGGGCTCCCCCCGGTTCCTT
2._GC-02-001-1-01
AACCCTCCAGGGCTCCCCCCGGTTCCTT
3._GC-08-111-3-10
AACCCTCCAGGGCTCCCCCCGGTTCCTT
4._GC-02-001-1-01
AACCCTCCAGGGCTCCCCCCGGTTCCTT
5._GC-02-001-1-01
AACCCTCCAGGGCTCCCCCCGGTTCCTT
6._GC-02-001-1-01
AACCCTCCAGGGCTCCCCCCGGTTCCTT
7._GC-02-001-1-01
AACCCTCCAGGGCTCCCCCCGGTTCCTT
8._GC-02-001-1-01
AACCCTCCAGGGCTCCCCCCGGTTCCTT
9._GC-02-001-1-01
AACCCTCCAGGGCTCCCCCCGGTTCCTT
10._GC-02-001-1-01
AACCCTCCAGGGCTCCCCCCGGTTCCTT
11._GC-02-001-1-01
AACCCTCCAGGGCTCCCCCCGGTTCCTT
12._GC-08-111-3-10
AACCCTCCAGGGCTCCCCCCGGTTCCTT
13._GC-08-111-3-10
AACCCTCCAGGGCTCCCCCCGGTTCCTT
14._GC-08-111-3-10
AACCCTCCAGGGCTCCCCCCGGTTCCTT
15._GC-02-001-1-01
AACCCTCCAGGGCTCCCCCCGGTTCC__
16._GC-02-001-1-01
AACCCTCCAGGGCTCCCCCCGGTTCCTT
17._GC-02-001-1-01
AACCCTCCAGGGCTCCCCCCGGTTCCTT
18._GC-08-111-3-10
AACCCTCCAGGGCTCCCCCCGGTTCCTT
19._GC-02-001-1-01
AACCCTCCAGGGCTCCCCCCGGTTCCTT
20._PA_107_[PER]
AACCCTCC________CCCCGG__CC__
21._PA_107_[PER]
AACCCTCC________CCCCGG__CC__
22._PA_107_[PER]
AACCCTCC________CCCCGG__CC__
23._PA_107_[PER]
AACCCTCC________CCCCGG__CC__
24._PA_107_[PER]
AACCCTCC________CCCCGG__CC__
25._PA_107_[PER]
AACCCTCC________CCCCGG__CC__
26._PA_107_[PER]
AACCCTCC________CCCCGG__CC__
27._PA_107_[PER]
AACCCTCC________CCCCGG__CC__
28._PA_107_[PER]
AACCCTCC________CCCCGG__CC__
29._PA_107_[PER]
AACCCTCC________CCCCGG__CC__
30._PA_107_[PER]
AACCCTCC________CCCCGG__CC__
31._PA_107_[PER]
AACCCTCC________CCCCGG__CC__
32._PA_107_[PER]
AACCCTCC________CCCCGG__CC__
33._PA_107_[PER]
AACCCTCC________CCCCGG__CC__
34._PA_107_[PER]
AACCCTCC________CCCCGG__CC__
35._PA_107_[PER]
AACCCTCC________CCCCGG__CC__
36._PA_107_[PER]
AACCCTCC________CCCCGG__CC__
37._PA_107_[PER]
AACCCTCC________CCCCGG__CC__
38._PA_107_[PER]
AACCCTCC________CCCCGG__CC__
39._PA_107_[PER]
AACCCTCC________CCCCGG__CC__
40._GC-08-111-3-10
AACCCTCCAGGGCTCCCCCCGGTTCCTT
41._PA_107_[PER]
AACCCTCC________CCCCGG__CC__
42._PA_107_[PER]
AACCCTCC________CCCCGG__CC__
43._PA_107_[PER]
AACCCTCC________CCCCGG__CC__
44._RUQ_1728
______CC____CC______________
45._RUQ_1728
AACC__CCAGGG__GGGG__GGAAGGAA
46._MITC-000340
AACC__CCAGGG__GGGG__GGAAGGAA
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
AACCAAAGCCCCCGTTAATTGGATAACC
1._GC-02-001-1-01
AACCAAAGCCCCCGTTAATTGGATAACC
2._GC-02-001-1-01
AACCAAAGCCCCCGTTAATTGGATAACC
3._GC-08-111-3-10
AACCAAAGCCCCCGTTAATTGGATAACC
4._GC-02-001-1-01
AACCAAAGCCCCCGTTAATTGGATAACC
5._GC-02-001-1-01
AACCAAAGCCCCCGTTAATTGGATAACC
6._GC-02-001-1-01
AACCAAAGCCCCCGTTAATTGGATAACC
7._GC-02-001-1-01
AACCAAAGCCCCCGTTAATTGGATAACC
8._GC-02-001-1-01
AACCAAAGCCCCCGTTAATTGGATAACC
9._GC-02-001-1-01
AACCAAAGCCCCCGTTAATTGGATAACC
10._GC-02-001-1-01
AACCAAAGCCCCCGTTAATTGGATAACC
11._GC-02-001-1-01
AACCAAAGCCCCCGTTAATTGGATAACC
12._GC-08-111-3-10
AACCAAAGCCCCCGTTAATTGGATAACC
13._GC-08-111-3-10
AACCAAAGCCCCCGTTAATTGGATAACC
14._GC-08-111-3-10
AACCAAAGCCCCCGTTAATTGGATAACC
15._GC-02-001-1-01
AACCAAAGCCCCCGTTAATTGGATAACC
16._GC-02-001-1-01
AACCAAAGCCCCCGTTAATTGGATAACC
17._GC-02-001-1-01
AACCAAAGCCCCCGTTAATTGGATAACC
18._GC-08-111-3-10
AACCAAAGCCCCCGTTAATTGGATAACC
19._GC-02-001-1-01
AACCAAAGCCCCCGTTAATTGGATAACC
20._PA_107_[PER]
______AG____CG________ATAA__
21._PA_107_[PER]
______AG____CG________ATAA__
22._PA_107_[PER]
______AG____CG________ATAA__
23._PA_107_[PER]
______AG____CG________ATAA__
24._PA_107_[PER]
______AG____CG________ATAA__
25._PA_107_[PER]
______AG____CG________ATAA__
26._PA_107_[PER]
______AG____CG________ATAA__
27._PA_107_[PER]
______AG____CG________ATAA__
28._PA_107_[PER]
______AG____CG________ATAA__
29._PA_107_[PER]
______AG____CG________ATAA__
30._PA_107_[PER]
______AG____CG________ATAA__
31._PA_107_[PER]
______AG____CG________ATAA__
32._PA_107_[PER]
______AG____CG________ATAA__
33._PA_107_[PER]
______AG____CG________ATAA__
34._PA_107_[PER]
______AG____CG________ATAA__
35._PA_107_[PER]
______AG____CG________ATAA__
36._PA_107_[PER]
______AG____CG________ATAA__
37._PA_107_[PER]
______AG____CG________ATAA__
38._PA_107_[PER]
______AG____CG________ATAA__
39._PA_107_[PER]
______AG____CG________ATAA__
40._GC-08-111-3-10
AACCAAAGCCCCCGTTAATTGGATAACC
41._PA_107_[PER]
______AG____CG________ATAA__
42._PA_107_[PER]
______AG____CG________ATAA__
43._PA_107_[PER]
______AG____CG________ATAA__
44._RUQ_1728
______AGTT__________________
45._RUQ_1728
TTCCAGAGGG__CGAAGGAAGGATAAGG
46._MITC-000340
TTCCAGAGGG__CGAAGGAAGGATAAGG
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
GGAATTGGAGCGCCGTGGTTAGCTGGCC
1._GC-02-001-1-01
GGAATTGGAGCGCCGTGGTTAGCTGGCC
2._GC-02-001-1-01
GGAATTGGAGCGCCGTGGTTAGCTGGCC
3._GC-08-111-3-10
GGAATTGGAGCGCCGTGGTTAGCTGGCC
4._GC-02-001-1-01
GGAATTGGAGCGCCGTGGTTAGCTGGCC
5._GC-02-001-1-01
GGAATTGGAGCGCCGTGGTTAGCTGGCC
6._GC-02-001-1-01
GGAATTGGAGCGCCGTGGTTAGCTGGCC
7._GC-02-001-1-01
GGAATTGGAGCGCCGTGGTTAGCTGGCC
8._GC-02-001-1-01
GGAATTGGAGCGCCGTGGTTAGCTGGCC
9._GC-02-001-1-01
GGAATTGGAGCGCCGTGGTTAGCTGGCC
10._GC-02-001-1-01
GGAATTGGAGCGCCGTGGTTAGCTGGCC
11._GC-02-001-1-01
GGAATTGGAGCGCCGTGGTTAGCTGGCC
12._GC-08-111-3-10
GGAATTGGAGCGCCGTGGTTAGCTGGCC
13._GC-08-111-3-10
GGAATTGGAGCGCCGTGGTTAGCTGGCC
14._GC-08-111-3-10
GGAATTGGAGCGCCGTGGTTAGCTGGCC
15._GC-02-001-1-01
GGAATTGGAGCGCCGTGGTTAGCTGGCC
16._GC-02-001-1-01
GGAATTGGAGCGCCGTGGTTAGCTGGCC
17._GC-02-001-1-01
GGAATTGGAGCGCC__GGTTAGCTGGCC
18._GC-08-111-3-10
GGAATTGGAGCGCCGTGGTTAGCTGGCC
19._GC-02-001-1-01
GGAATTGGAGCGCCGTGGTTAGCTGGCC
20._PA_107_[PER]
GGAA______CG__GT____AG______
21._PA_107_[PER]
GGAA______CG__GT____AG______
22._PA_107_[PER]
GGAA______CG__GT____AG______
23._PA_107_[PER]
GGAA______CG__GT____AG______
24._PA_107_[PER]
GGAA______CG__GT____AG______
25._PA_107_[PER]
GGAA______CG__GT____AG______
26._PA_107_[PER]
GGAA______CG__GT____AG______
27._PA_107_[PER]
GGAA______CG__GT____AG______
28._PA_107_[PER]
GGAA______CG__GT____AG______
29._PA_107_[PER]
GGAA______CG__GT____AG______
30._PA_107_[PER]
GGAA______CG__GT____AG______
31._PA_107_[PER]
GGAA______CG__GT____AG______
32._PA_107_[PER]
GGAA______CG__GT____AG______
33._PA_107_[PER]
GGAA______CG________AG______
34._PA_107_[PER]
GGAA______CG__GT____AG______
35._PA_107_[PER]
GGAA______CG__GT____AG______
36._PA_107_[PER]
GGAA______CG__GT____AG______
37._PA_107_[PER]
GGAA______CG__GT____AG______
38._PA_107_[PER]
GGAA______CG__GT____AG______
39._PA_107_[PER]
GGAA______CG__GT____AG______
40._GC-08-111-3-10
GGATTTGGAGCGCCGTGGTTAGCTGGCC
41._PA_107_[PER]
GGAT______CG__GT____AG______
42._PA_107_[PER]
GGAA______CG__GT____AG______
43._PA_107_[PER]
GGAA______CG__GT____AG______
44._RUQ_1728
GG________CG__________CT____
45._RUQ_1728
CCAAAACCAGCGCCACCCAAAGAGGGGG
46._MITC-000340
CCAAAACCAGCGCCACCCAAAGAGGGGG
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
GGTTTTAGAGAACCCCGGAAGGTTCTCC
1._GC-02-001-1-01
GGTTTTAGAGAACCCCGGAAGGTTCTCC
2._GC-02-001-1-01
GGTTTTAGAGAACCCCGGAAGGTTCTCC
3._GC-08-111-3-10
GGTTTTAGAGAACCCCGGAAGGTTCTCC
4._GC-02-001-1-01
GGTTTTAGAGAACCCCGGAAGGTTCTCC
5._GC-02-001-1-01
GGTTTTAGAGAACCCCGGAAGGTTCTCC
6._GC-02-001-1-01
GGTTTTAGAGAACCCCGGAAGGTTCTCC
7._GC-02-001-1-01
GGTTTTAGAGAACCCCGGAAGGTTCTCC
8._GC-02-001-1-01
GGTTTTAGAGAACCCCGGAAGGTTCTCC
9._GC-02-001-1-01
GGTTTTAGAGAACCCCGGAAGGTTCTCC
10._GC-02-001-1-01
GGTTTTAGAGAACCCCGGAAGGTTCTCC
11._GC-02-001-1-01
GGTTTTAGAGAACCCCGGAAGGTTCTCC
12._GC-08-111-3-10
GGTTTTAGAGAACCCCGGAAGGTTCTCC
13._GC-08-111-3-10
GGTTTTAGAGAACCCCGGAAGGTTCTCC
14._GC-08-111-3-10
GGTTTTAGAGAACCCCGGAAGGTT__CC
15._GC-02-001-1-01
GGTTTTAGAGAACCCCGGAAGGTTCTCC
16._GC-02-001-1-01
GGTTTTAGAGAACCCCGGAAGGTTCTCC
17._GC-02-001-1-01
GGTTTTAGAGAACCCC__AAGGTTCTCC
18._GC-08-111-3-10
GGTTTTAGAG__CCCCGGAAGGTTCTCC
19._GC-02-001-1-01
GGTTTTAGAG__CCCCGGAAGGTT__CC
20._PA_107_[PER]
____TT__________________CTCC
21._PA_107_[PER]
____TT__________________CTCC
22._PA_107_[PER]
____TT__________________CTCC
23._PA_107_[PER]
____TT__________________CTCC
24._PA_107_[PER]
____TT__________________CTCC
25._PA_107_[PER]
____TT__________________CTCC
26._PA_107_[PER]
____TT__________________CTCC
27._PA_107_[PER]
____TT__________________CTCC
28._PA_107_[PER]
____TT__________________CTCC
29._PA_107_[PER]
____TT__________________CTCC
30._PA_107_[PER]
____TT__________________CTCC
31._PA_107_[PER]
____TT__________________CTCC
32._PA_107_[PER]
____TT__________________CTCC
33._PA_107_[PER]
____TT__________________CTCC
34._PA_107_[PER]
____TT__________________CTCC
35._PA_107_[PER]
____TT____________________CC
36._PA_107_[PER]
____TT__________________CTCC
37._PA_107_[PER]
____TT____________________CC
38._PA_107_[PER]
____TT__________________CTCC
39._PA_107_[PER]
____TT__________________CTCC
40._GC-08-111-3-10
GGTTTTAGAGAACCCCGGAAGGTTCTCC
41._PA_107_[PER]
____TT__________________CTCC
42._PA_107_[PER]
____TT__________________CTCC
43._PA_107_[PER]
____TT__________________CTCC
44._RUQ_1728
________AG__________________
45._RUQ_1728
CC__AA__AGAAGG__GGAACCAAAGGG
46._MITC-000340
CC__AA__AGAAGG__GGAACCAAAGGG
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
TTGGCCCTTTAAGGGGACAGTTGGGGCC
1._GC-02-001-1-01
TTGGCCCTTTAAGGGGACAGTTGGGGCC
2._GC-02-001-1-01
TTGGCCCTTTAAGGGGACAGTTGGGGCC
3._GC-08-111-3-10
TTGGCCCTTTAAGGGGACAGTTGGGGCC
4._GC-02-001-1-01
TTGGCCCTTTAAGGGGACAGTTGGGGCC
5._GC-02-001-1-01
TTGGCCCTTTAAGGGGACAGTTGGGGCC
6._GC-02-001-1-01
TTGGCCCTTTAAGGGGACAGTTGGGGCC
7._GC-02-001-1-01
TTGGCCCTTTAAGGGGACAGTTGGGGCC
8._GC-02-001-1-01
TTGGCCCTTTAAGGGGACAGTTGGGGCC
9._GC-02-001-1-01
TTGGCCCTTTAAGGGGACAGTTGGGGCC
10._GC-02-001-1-01
TTGGCCCTTTAAGGGGACAGTTGGGGCC
11._GC-02-001-1-01
TTGGCCCTTTAAGGGGACAGTTGGGGCC
12._GC-08-111-3-10
TTGGCCCTTT__GGGGACAGTTGGGGCC
13._GC-08-111-3-10
TTGGCCCTTTAAGGGGACAGTTGGGGCC
14._GC-08-111-3-10
TTGGCCCTTTAAGGGGACAGTTGGGGCC
15._GC-02-001-1-01
TTGGCCCTTTAAGGGGACAGTTGGGGCC
16._GC-02-001-1-01
TTGGCCCTTTAAGGGGACAGTTGGGGCC
17._GC-02-001-1-01
TTGGCCCTTTAAGGGGACAGTTGGGGCC
18._GC-08-111-3-10
TTGGCCCTTT__GGGGACAGTTGGGGCC
19._GC-02-001-1-01
TTGGCCCTTTAAGGGGACAGTTGGGGCC
20._PA_107_[PER]
____CC__TTAAGG__ACAGTTGG____
21._PA_107_[PER]
____CC__TTAAGG__ACAGTTGG____
22._PA_107_[PER]
____CC__TTAAGG__ACAGTTGG____
23._PA_107_[PER]
____CC__TTAAGG__ACAGTTGG____
24._PA_107_[PER]
____CC__TTAAGG__ACAGTTGG____
25._PA_107_[PER]
____CC__TTAAGG__ACAGTTGG____
26._PA_107_[PER]
____CC__TTAAGG__ACAGTTGG____
27._PA_107_[PER]
____CC__TTAAGG__ACAGTTGG____
28._PA_107_[PER]
____CC__TTAAGG__ACAGTTGG____
29._PA_107_[PER]
____CC__TTAAGG__ACAGTTGG____
30._PA_107_[PER]
____CC__TTAAGG__ACAGTTGG____
31._PA_107_[PER]
____CC__TTAAGG__ACAGTTGG____
32._PA_107_[PER]
____CC__TTAAGG__ACAGTTGG____
33._PA_107_[PER]
____CC__TTAAGG__ACAGTTGG____
34._PA_107_[PER]
____CC__TTAAGG__ACAGTTGG____
35._PA_107_[PER]
____CC__TTAAGG__ACAGTTGG____
36._PA_107_[PER]
____CC__TTAAGG__ACAGTTGG____
37._PA_107_[PER]
____CC__TTAAGG__ACAGTTGG____
38._PA_107_[PER]
____CC__TT__GG__ACAGTTGG____
39._PA_107_[PER]
____CC__TT__GG__ACAGTTGG____
40._GC-08-111-3-10
TTGGCCCTTT__GGGGACAGTTGGGGCC
41._PA_107_[PER]
____CC__TT__GG__ACAGTTGG____
42._PA_107_[PER]
____CC__TTACGG__ACAGTTGG____
43._PA_107_[PER]
____CC__TTACGG__ACAGTTGG____
44._RUQ_1728
__GG____________ACAG__GGGG__
45._RUQ_1728
AAGGGGAGAAACGGGGACAGAACCGG__
46._MITC-000340
AAGGGGAGAAACGGGGACAGAACCGG__
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
_Input profile
CCGGCTCCAAAACCGGAACGCCATAACT
1._GC-02-001-1-01
CCGGCTCCAAAACCGGAACGCCATAACT
2._GC-02-001-1-01
CCGGCTCCAAAACCGGAACGCCATAACT
3._GC-08-111-3-10
CCGGCTCCAAAACCGGAACGCCATAACT
4._GC-02-001-1-01
CCGGCTCCAAAACCGGAACGCCATAACT
5._GC-02-001-1-01
CCGGCTCCAAAACCGGAACGCCATAACT
6._GC-02-001-1-01
CCGGCTCCAAAACCGGAACGCCATAACT
7._GC-02-001-1-01
CCGGCTCCAAAACCGGAACGCCATAACT
8._GC-02-001-1-01
CCGGCTCCAAAACCGGAACGCCATAACT
9._GC-02-001-1-01
CCGGCTCCAAAACCGGAACGCCATAACT
10._GC-02-001-1-01
CCGGCTCCAAAACCGGAACGCCATAACT
11._GC-02-001-1-01
CCGGCTCCAAAACCGGAACGCCATAACT
12._GC-08-111-3-10
CCGGCTCCAAAACCGGAACGCCATAACT
13._GC-08-111-3-10
CCGG__CCAAAACCGGAACGCCATAACT
14._GC-08-111-3-10
CCGGCTCCAAAACCGGAACGCCATAACT
15._GC-02-001-1-01
CCGGCTCCAAAACCGGAACGCCATAACT
16._GC-02-001-1-01
CCGGCTCCAAAACCGGAACGCCATAACT
17._GC-02-001-1-01
CCGGCTCCAAAACCGGAACGCCATAACT
18._GC-08-111-3-10
CCGGCTCCAAAACCGGAACGCCATAACT
19._GC-02-001-1-01
CCGGCTCCAAAACCGGAACGCCATAACT
20._PA_107_[PER]
__GGCT__________AACG______CT
21._PA_107_[PER]
__GGCT__________AACG______CT
22._PA_107_[PER]
__GGCT__________AACG______CT
23._PA_107_[PER]
__GGCT__________AACG______CT
24._PA_107_[PER]
__GGCT__________AACG______CT
25._PA_107_[PER]
__GGCT__________AACG______CT
26._PA_107_[PER]
__GGCT__________AACG______CT
27._PA_107_[PER]
__GGCT__________AACG______CT
28._PA_107_[PER]
__GGCT__________AACG______CT
29._PA_107_[PER]
__GGCT__________AACG______CT
30._PA_107_[PER]
__GGCT__________AACG______CT
31._PA_107_[PER]
__GGCT__________AACG______CT
32._PA_107_[PER]
__GG____________AACG______CT
33._PA_107_[PER]
__GGCT__________AACG______CT
34._PA_107_[PER]
__GGCT__________AACG______CT
35._PA_107_[PER]
__GGCT__________AACG______CT
36._PA_107_[PER]
__GGCT__________AACG______CT
37._PA_107_[PER]
__GGCT__________AACG______CT
38._PA_107_[PER]
__GGCT__________AACG______CT
39._PA_107_[PER]
__GGCT__________AACG______CT
40._GC-08-111-3-10
CCGGCTCCAAAACCGGAACGCCATAACT
41._PA_107_[PER]
__GGCT__________AACG______CT
42._PA_107_[PER]
__AACT__________AACG______CT
43._PA_107_[PER]
__AACT__________AACG______CT
44._RUQ_1728
__AA____________AACG____AA__
45._RUQ_1728
____AGCCAAAACC__AACGGGATAAAG
46._MITC-000340
____AGCCAAAACC__AACGGGATAAAG
 85 86 87 88 89 90 91 92 93 94     
_Input profile
CTCCCTGGCCCCTTTTTTGGX_XX_XX_XX_X
1._GC-02-001-1-01
CTCCCTGGCCCCTTTTTTGGX_XX_XX_XX_X
2._GC-02-001-1-01
CTCCCTGGCCCCTTTTTTGGX_XX_XX_XX_X
3._GC-08-111-3-10
CTCCCTGGCCCCTTTTTTGGX_XX_XX_XX_X
4._GC-02-001-1-01
CTCCCTGGCCCCTTTTTTGGX_XX_XX_XX_X
5._GC-02-001-1-01
CTCCCTGGCCCCTTTTTTGGX_XX_XX_XX_X
6._GC-02-001-1-01
CTCCCTGGCCCCTTTTTTGGX_XX_XX_XX_X
7._GC-02-001-1-01
CTCCCTGGCCCCTTTTTTGGX_XX_XX_XX_X
8._GC-02-001-1-01
CTCCCTGGCCCCTTTTTTGGX_XX_XX_XX_X
9._GC-02-001-1-01
CTCCCTGGCCCCTTTTTTGGX_XX_XX_XX_X
10._GC-02-001-1-01
CTCCCTGGCCCCTTTTTTGGX_XX_XX_XX_X
11._GC-02-001-1-01
CT__CTGGCCCCTTTTTTGGX_XX_XX_XX_X
12._GC-08-111-3-10
CTCCCTGGCCCCTTTTTTGGX_XX_XX_XX_X
13._GC-08-111-3-10
CTCCCTGGCCCCTTTTTTGGX_XX_XX_XX_X
14._GC-08-111-3-10
CTCCCTGGCCCCTTTTTTGGX_XX_XX_XX_X
15._GC-02-001-1-01
CTCCCTGGCCCCTTTTTTGGX_XX_XX_XX_X
16._GC-02-001-1-01
CTCCCTGGCCCC__TTTTGGX_XX_XX_XX_X
17._GC-02-001-1-01
CTCCCTGGCCCCTTTTTTGGX_XX_XX_XX_X
18._GC-08-111-3-10
CTCCCTGGCCCCTTTTTTGGX_XX_XX_XX_X
19._GC-02-001-1-01
CTCCCTGGCCCCTTTTTTGGX_XX_XX_XX_X
20._PA_107_[PER]
CTCC__GG__CCTTTT____X_XX_XX_XX_X
21._PA_107_[PER]
CTCC__GG__CCTTTT____X_XX_XX_XX_X
22._PA_107_[PER]
CTCC__GG__CCTTTT____X_XX_XX_XX_X
23._PA_107_[PER]
CTCC__GG__CCTTTT____X_XX_XX_XX_X
24._PA_107_[PER]
CTCC__GG__CCTTTT____X_XX_XX_XX_X
25._PA_107_[PER]
CTCC__GG__CCTTTT____X_XX_XX_XX_X
26._PA_107_[PER]
CTCC__GG__CCTTTT____X_XX_XX_XX_X
27._PA_107_[PER]
CTCC__GG__CCTTTT____X_XX_XX_XX_X
28._PA_107_[PER]
CTCC__GG__CCTTTT____X_XX_XX_XX_X
29._PA_107_[PER]
CTCC__GG__CCTTTT____X_XX_XX_XX_X
30._PA_107_[PER]
CTCC__GG__CCTTTT____X_XX_XX_XX_X
31._PA_107_[PER]
CTCC__GG__CCTTTT____X_XX_XX_XX_X
32._PA_107_[PER]
CTCC__GG__CCTTTT____X_XX_XX_XX_X
33._PA_107_[PER]
CTCC__GG__CCTTTT____X_XX_XX_XX_X
34._PA_107_[PER]
CTCC__GG__CC__TT____X_XX_XX_XX_X
35._PA_107_[PER]
CTCC__GG__CCTTTT____X_XX_XX_XX_X
36._PA_107_[PER]
CT____GG__CCTTTT____X_XX_XX_XX_X
37._PA_107_[PER]
CTCC__GG__CCTTTT____X_XX_XX_XX_X
38._PA_107_[PER]
CTCC__GG__CCTTTT____X_XX_XX_XX_X
39._PA_107_[PER]
CTCC__GG__CCTTTT____X_XX_XX_XX_X
40._GC-08-111-3-10
CTCCCTGGCCCCTTTTTTGGX_XX_XX_XX_X
41._PA_107_[PER]
CTCC__GG__CCTTTT____X_XX_XX_XX_X
42._PA_107_[PER]
CTCC__GG__CCTTTT____X_XX_XX_XX_X
43._PA_107_[PER]
CTCC__GG__CCTTTT____X_XX_XX_XX_X
44._RUQ_1728
__CC____CC__TT______X_XX_XX_XX_X
45._RUQ_1728
AG__AG____GGAAAAAAGGX_XX_XX_XX_X
46._MITC-000340
AG__AG____GGAAAAAAGGX_XX_XX_XX_X

Input profile: PA_107_[PER] GC-02-001-1-01

 
 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

1._PA_107_[PER] GC-02-001-1-01

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

2._PA_107_[PER] GC-02-001-1-01

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

3._PA_107_[PER] GC-08-111-3-10

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

4._PA_107_[PER] GC-02-001-1-01

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14 > FP3
 Mars, 2018

5._PA_107_[PER] GC-02-001-1-01

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 16
Notes: 16
 Mars, 2018

6._PA_107_[PER] GC-02-001-1-01

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14 > FP3
 Mars, 2018

7._PA_107_[PER] GC-02-001-1-01

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

8._PA_107_[PER] GC-02-001-1-01

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

9._PA_107_[PER] GC-02-001-1-01

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

10._PA_107_[PER] GC-02-001-1-01

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4 > FP2
 Mars, 2018

11._PA_107_[PER] GC-02-001-1-01

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

12._PA_107_[PER] GC-08-111-3-10

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14
 Mars, 2018

13._PA_107_[PER] GC-08-111-3-10

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

14._PA_107_[PER] GC-08-111-3-10

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4 > FP1
 Mars, 2018

15._PA_107_[PER] GC-02-001-1-01

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 15
Notes: 15
 Mars, 2018

16._PA_107_[PER] GC-02-001-1-01

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

17._PA_107_[PER] GC-02-001-1-01

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

18._PA_107_[PER] GC-08-111-3-10

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

19._PA_107_[PER] GC-02-001-1-01

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

20._PA_107_[PER]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 2101 10
 Dapeng Zhang, 2016

21._PA_107_[PER]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 2101 4 > FP
 Dapeng Zhang, 2016

22._PA_107_[PER]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 2101 14 > F
 Dapeng Zhang, 2016

23._PA_107_[PER]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 2101 14 > F
 Dapeng Zhang, 2016

24._PA_107_[PER]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 2101 1 > FP
 Dapeng Zhang, 2016

25._PA_107_[PER]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 2101 16
 Dapeng Zhang, 2016

26._PA_107_[PER]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 2101 15
 Dapeng Zhang, 2016

27._PA_107_[PER]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 2101 11
 Dapeng Zhang, 2016

28._PA_107_[PER]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8310 10
 Dapeng Zhang, 2016

29._PA_107_[PER]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 2101 9
 Dapeng Zhang, 2016

30._PA_107_[PER]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 2101 5
 Dapeng Zhang, 2016

31._PA_107_[PER]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 2101 2
 Dapeng Zhang, 2016

32._PA_107_[PER]

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8310 8
 Dapeng Zhang, 2016

33._PA_107_[PER]

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 2101 12
 Dapeng Zhang, 2016

34._PA_107_[PER]

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 2101 8
 Dapeng Zhang, 2016

35._PA_107_[PER]

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 2101 7
 Dapeng Zhang, 2016

36._PA_107_[PER]

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 2101 3
 Dapeng Zhang, 2016

37._PA_107_[PER]

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8310 4 > FP
 Dapeng Zhang, 2016

38._PA_107_[PER]

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8310 14
 Dapeng Zhang, 2016

39._PA_107_[PER]

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8310 13
 Dapeng Zhang, 2016

40._PA_107_[PER] GC-08-111-3-10

99.5 %
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

41._PA_107_[PER]

98.7 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8310 7
 Dapeng Zhang, 2016

42._PA_107_[PER]

96.2 %
39 shared markers

 View  View all  Clone  Any
Malaysian Cocoa Board (MCB), Malaysia
Location: Plot 90 C0213 2B
 Dapeng Zhang, 2016

43._PA_107_[PER]

96.2 %
39 shared markers

 View  View all  Clone  Any
International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Marper D 284
 Dapeng Zhang, 2016

44._PA_107_[PER] RUQ_1728

87.5 %
20 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 
View Data
Par
0.847 Sca
0.137

45._PA_107_[PER] RUQ_1728

47.5 %
80 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

46._PA_107_[PER] MITC-000340

47.5 %
80 shared markers

 View  View all  Clone  Any
USDA-SHRS, United States of America
 Mars, 2018

 

  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP860 18TcSNP1062 19TcSNP836 20TcSNP878
21TcSNP929 22TcSNP413 23TcSNP653 24TcSNP1149 25TcSNP174
26TcSNP32 27TcSNP372 28TcSNP448 29TcSNP872 30TcSNP953
31TcSNP1034 32TcSNP1175 33TcSNP1111 34TcSNP577 35TcSNP90
36TcSNP150 37TcSNP28 38TcSNP751 39TcSNP1484 40TcSNP602
41TcSNP561 42TcSNP894 43TcSNP1063 44TcSNP1126 45TcSNP1270
46TcSNP606 47TcSNP329 48TcSNP689 49TcSNP944 50TcSNP1242
51TcSNP1383 52TcSNP547 53TcSNP776 54TcSNP1309 55TcSNP151
56TcSNP1520 57TcSNP799 58TcSNP899 59TcSNP226 60TcSNP1439
61TcSNP1442 62TcSNP193 63TcSNP25 64TcSNP364 65TcSNP144
66TcSNP230 67TcSNP560 68TcSNP723 69TcSNP731 70TcSNP701
71TcSNP1041 72TcSNP645 73TcSNP917 74Tcm003s01336581 75Tcm003s07402719
76Tcm001s00947643 77Tcm006s26664133 78Tcm002s20575712 79TcSNP529 80TcSNP1458
81TcSNP60 82TcSNP430 83TcSNP823 84TcSNP619 85TcSNP994
86TcSNP1144 87TcSNP1156 88TcSNP469 89TcSNP999 90TcSNP242
91TcSNP1253 92TcSNP1414 93TcSNP154 94TcSNP240