SNP Profiles of ICS-95   View Data

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 Key

 1234567891011121314
_Input profile
AAAACTCCAGAGCTCCCTCTGGCTCCAT
1._GC-01-128-7-05
AAAACTCCAGAGCTCCCTCTGGCTCCAT
2._GC-03-040-4-04
AAAACTCCAGAGCTCCCTCTGGCTCCAT
3._GC-03-040-4-04
AAAACTCCAGAGCTCCCTCTGGCTCCAT
4._GC-03-040-4-04
AAAACTCCAGAGCTCCCTCTGGCTCCAT
5._GC-03-040-4-04
AAAACTCCAGAGCTCCCTCTGGCTCCAT
6._GC-03-040-4-04
AAAACTCCAGAGCTCCCTCTGGCTCCAT
7._GC-01-128-7-05
AAAACTCCAGAGCTCCCTCTGGCTCCAT
8._GC-01-128-7-05
AAAACTCCAGAGCTCCCTCTGGCTCCAT
9._GC-01-128-7-05
AAAACTCCAGAGCTCCCTCTGGCTCCAT
10._GC-02-002-1-02
AAAACTCCAGAGCTCCCTCTGGCTCCAT
11._GC-03-039-4-03
AAAACTCCAGAGCTCCCTCTGGCTCCAT
12._GC-03-039-4-03
AAAACTCCAGAGCTCCCTCTGGCTCCAT
13._GC-03-039-4-03
AAAACTCCAGAGCTCCCTCTGGCTCCAT
14._GC-03-040-4-04
AAAACTCCAGAGCTCCCTCTGGCTCCAT
15._GC-01-128-7-05
AAAACTCCAGAGCTCCCTCTGGCT__AT
16._GC-01-128-7-05
AAAACTCCAGAGCTCCCTCTGGCTCCAT
17._GC-03-039-4-03
AAAACTCCAGAGCTCCCTCTGGCTCCAT
18._GC-03-039-4-03
AAAACTCCAGAGCTCCCTCTGGCTCCAT
19._GC-03-039-4-03
AAAACTCCAGAGCTCCCTCTGGCTCCAT
20._GC-03-040-4-04
AA__CTCCAGAGCTCCCTCTGGCTCCAT
21._GC-03-039-4-03
AAAACTCCAGAGCTCCCTCTGGCTCCAT
22._GC-02-2-1-02
AAAACTCCAGAGCTCCCTCTGGCTCCAT
23._ICS_95
AAAACTCC________CTCTGG__CC__
24._ICS_95
AAAACTCC________CTCTGG__CC__
25._ICS_95
AAAACTCC________CTCTGG__CC__
26._ICS_95
AAAACTCC________CTCTGG__CC__
27._ICS_95
AAAACTCC________CTCTGG__CC__
28._ICS_95
AAAACTCC________CTCTGG__CC__
29._ICS_95
AAAACTCC________CTCTGG__CC__
30._ICS_95
AAAACTCC________CTCTGG__CC__
31._ICS_95
AAAACTCC________CTCTGG__CC__
32._ICS_95
AAAACTCC________CTCTGG__CC__
33._ICS_95
AAAACTCC________CTCTGG__CC__
34._ICS_95
AAAACTCC________CTCTGG__CC__
35._ICS_95
AAAACTCC________CTCTGG__CC__
36._ICS_95
AAAACTCC________CTCTGG__CC__
37._ICS_95
AAAACTCC________CTCTGG__CC__
38._ICS_95
AAAACTCC________CTCTGG__CC__
39._ICS_95
AAAACTCC________CTCTGG__CC__
40._ICS_95
AAAACTCC________CTCTGG__CC__
41._ICS_95
AAAACTCC________CTCTGG______
42._ICS_95
AAAACTCC________CTCTGG__CC__
43._ICS_95
AA__CTCC________CTCTGG__CC__
44._ICS_95
AAAACTCC________CTCTGG__CC__
45._ICS_95
AAAACTCC________CTCTGG__CC__
46._RUQ_1144
AAAACTCC________CTCTGG__CC__
47._ICS_95
AAAACTCC________CTCTGG__CC__
48._ICS_95
AAAACTCC________CTCTGG__CC__
49._ICS_95
AAAACTCC__________CTGG__CC__
50._ICS_95
AAAACTCC________CTCTGG__CC__
51._ICS_95
AAAACTCC________CTCTGG__CC__
52._ICS_95
AAAACTCC________CTCTGG__CC__
53._GC-02-2-1-02
AAAACTCCAGAGCTCCCTCTGGCTCCAT
54._GC-02-2-1-02
AAAACTCCAGAGCTCCCTCTGGCTCCAT
55._GC-02-2-1-02
AAAACTCCAGAGCTCC__CTGGCTCCAT
56._ICS_95
AAAACTCC________CTCTGG__CC__
57._RUQ_1144
____CTCC____CC__CT____CTCC__
58._RUQ_1144
______CC________CT______CC__
59._RUQ_1144B
______CC____CC______________
60._RUQ_1144
______CC____CC______________
61._GC-02-002-1-2
AAAA__CCAGAG__GGAG__GGAGGGAT
62._RUQ_1144
AAAA__CCAGAG__GGAG__GGAGGGAT
63._MITC-000342
AAAA__CCAGAG__GGAG__GGAGGGAT
64._ICS_95_Fld#_13_Plt#_1
AAAA__CCAGAG__GGAG__GGAGGGAT
 1516171819202122232425262728
_Input profile
CCAAAAGGCGGGCTAGTTAGATATCGCG
1._GC-01-128-7-05
CCAAAAGGCGGGCTAGTTAGATATCGCG
2._GC-03-040-4-04
CCAAAAGGCGGGCTAGTTAGATATCGCG
3._GC-03-040-4-04
CCAAAAGGCGGGCTAGTTAGATATCGCG
4._GC-03-040-4-04
CCAAAAGGCGGGCTAGTTAGATATCGCG
5._GC-03-040-4-04
CCAAAAGGCGGGCTAGTTAGATATCGCG
6._GC-03-040-4-04
CCAAAAGGCGGGCTAGTTAGATATCGCG
7._GC-01-128-7-05
CCAAAAGGCGGGCTAGTTAGATATCGCG
8._GC-01-128-7-05
CCAAAAGGCGGGCTAGTTAGATATCGCG
9._GC-01-128-7-05
CCAAAAGGCGGGCTAGTTAGATATCGCG
10._GC-02-002-1-02
CCAAAAGGCGGGCTAGTTAGATATCGCG
11._GC-03-039-4-03
CCAAAAGGCGGGCTAGTTAGATATCGCG
12._GC-03-039-4-03
CCAAAAGGCGGGCTAGTTAGATATCGCG
13._GC-03-039-4-03
CCAAAAGGCGGGCTAGTTAGATATCGCG
14._GC-03-040-4-04
CCAAAAGGCGGGCTAGTTAGATATCGCG
15._GC-01-128-7-05
CCAAAAGGCGGGCTAGTTAGATATCGCG
16._GC-01-128-7-05
CCAAAAGGCGGGCTAGTTAGATATCGCG
17._GC-03-039-4-03
CCAAAAGGCGGGCTAGTTAGATATCGCG
18._GC-03-039-4-03
CCAAAAGGCGGGCTAGTTAGATATCGCG
19._GC-03-039-4-03
CCAAAAGGCGGGCTAGTTAGATATCGCG
20._GC-03-040-4-04
CCAAAAGGCGGGCTAGTTAGATATCGCG
21._GC-03-039-4-03
CCAAAAGGCGGGCTAGTTAGATATCGCG
22._GC-02-2-1-02
CCAAAAGGCGGGCTAGTTAGATATCGCG
23._ICS_95
____AA____GG________ATAT__CG
24._ICS_95
____AA____GG________ATAT__CG
25._ICS_95
____AA____GG________ATAT__CG
26._ICS_95
____AA____GG________ATAT__CG
27._ICS_95
____AA____GG________ATAT__CG
28._ICS_95
____AA____GG________ATAT__CG
29._ICS_95
____AA____GG________ATAT__CG
30._ICS_95
____AA____GG________ATAT__CG
31._ICS_95
____AA____GG________ATAT__CG
32._ICS_95
____AA____GG________ATAT__CG
33._ICS_95
____AA____GG________ATAT__CG
34._ICS_95
____AA____GG________ATAT__CG
35._ICS_95
____AA____GG________ATAT__CG
36._ICS_95
____AA____GG________ATAT__CG
37._ICS_95
____AA____GG________ATAT__CG
38._ICS_95
____AA____GG________ATAT__CG
39._ICS_95
____AA____GG________ATAT__CG
40._ICS_95
____AA____GG________ATAT__CG
41._ICS_95
____AA____GG________ATAT__CG
42._ICS_95
____AA____GG________ATAT__CG
43._ICS_95
____AA____GG________ATAT__CG
44._ICS_95
____AA____GG________ATAT__CG
45._ICS_95
____AA____GG________ATAT__CG
46._RUQ_1144
____AA____GG________ATAT__CG
47._ICS_95
____AA____GG________ATAT__CG
48._ICS_95
____AA____GG________ATAT__CG
49._ICS_95
____AA____GG________ATAT__CG
50._ICS_95
____AA____GG________ATAT__CG
51._ICS_95
____AA____GG________ATAT__CG
52._ICS_95
____AA____GG________ATAT__CG
53._GC-02-2-1-02
CCAAAAGGCGGGCTAGTTAGATATCGCG
54._GC-02-2-1-02
CCAAAAGGCGGGCTAGTTAGATATCGCG
55._GC-02-2-1-02
CCAAAAGGCGGGCTAGTTAGATATCGCG
56._ICS_95
____AA____GG________ATAT__CG
57._RUQ_1144
________CG________AG__ATCGCG
58._RUQ_1144
__AG____CG__CT____AG__ATCGCG
59._RUQ_1144B
____AATT__________________CG
60._RUQ_1144
____AATT__________________CG
61._GC-02-002-1-2
CCAGAACC__GGAGAAAAAGATATCGCG
62._RUQ_1144
CCAGAACC__GGAGAAAAAGATATCGCG
63._MITC-000342
CCAGAACC__GGAGAAAAAGATATCGCG
64._ICS_95_Fld#_13_Plt#_1
CCAGAACC__GGAGAAAAAGATATCGCG
 2930313233343536373839404142
_Input profile
AACTGTGGCCACAAGTGGGTAGCTAACC
1._GC-01-128-7-05
AACTGTGGCCACAAGTGGGTAGCTAACC
2._GC-03-040-4-04
AACTGTGGCCACAAGTGGGTAGCTAACC
3._GC-03-040-4-04
AACTGTGGCCACAAGTGGGTAGCTAACC
4._GC-03-040-4-04
AACTGTGGCCACAAGTGGGTAGCTAACC
5._GC-03-040-4-04
AACTGTGGCCACAAGTGGGTAGCTAACC
6._GC-03-040-4-04
AACTGTGGCCACAAGTGGGTAGCTAACC
7._GC-01-128-7-05
AACTGTGGCCACAAGTGGGTAGCTAACC
8._GC-01-128-7-05
AACTGTGGCCACAAGTGGGTAGCTAACC
9._GC-01-128-7-05
AACTGTGGCCACAAGTGGGTAGCTAACC
10._GC-02-002-1-02
AACTGTGGCCACAAGTGGGTAGCTAACC
11._GC-03-039-4-03
AACTGTGGCCACAAGTGGGTAGCTAACC
12._GC-03-039-4-03
AACTGTGGCCACAAGTGGGTAGCTAACC
13._GC-03-039-4-03
AACTGTGGCCACAAGTGGGTAGCTAACC
14._GC-03-040-4-04
AACTGTGGCCACAAGTGGGTAGCTAACC
15._GC-01-128-7-05
AACTGTGGCCACAAGTGGGTAGCTAACC
16._GC-01-128-7-05
AACTGTGGCCACAAGTGGGTAGCTAACC
17._GC-03-039-4-03
AACTGTGGCCACAAGTGGGTAGCTAACC
18._GC-03-039-4-03
__CTGTGGCCACAAGTGGGTAGCTAACC
19._GC-03-039-4-03
AACTGTGGCCACAAGTGGGTAGCTAACC
20._GC-03-040-4-04
AACTGTGGCCACAAGTGGGTAGCTAACC
21._GC-03-039-4-03
AACTGTGGCCACAAGTGGGTAGCTAACC
22._GC-02-2-1-02
AACTGTGGCCACAAGTGGGTAGCTAACC
23._ICS_95
AA______CC__AAGT____AG______
24._ICS_95
AA______CC__AAGT____AG______
25._ICS_95
AA______CC__AAGT____AG______
26._ICS_95
AA______CC__AAGT____AG______
27._ICS_95
AA______CC__AAGT____AG______
28._ICS_95
AA______CC__AAGT____AG______
29._ICS_95
AA______CC__AAGT____AG______
30._ICS_95
AA______CC__AAGT____AG______
31._ICS_95
AA______CC__AAGT____AG______
32._ICS_95
AA______CC__AAGT____AG______
33._ICS_95
AA______CC__AAGT____AG______
34._ICS_95
AA______CC__AAGT____AG______
35._ICS_95
AA______CC__AAGT____AG______
36._ICS_95
AA______CC__AAGT____AG______
37._ICS_95
AA______CC__AAGT____AG______
38._ICS_95
AA______CC__AAGT____AG______
39._ICS_95
AA______CC__AAGT____AG______
40._ICS_95
AA______CC__AAGT____AG______
41._ICS_95
AA______CC__AAGT____AG______
42._ICS_95
AA______CC__AAGT____AG______
43._ICS_95
AA______CC__AAGT____AG______
44._ICS_95
________CC__AAGT____AG______
45._ICS_95
AA______CC__AAGT____AG______
46._RUQ_1144
AA______CC__AAGT____AG______
47._ICS_95
AA______CC__AAGT____AG______
48._ICS_95
________CC__AAGT____AG______
49._ICS_95
AA______CC__AAGT____AG______
50._ICS_95
AA______CC__AAGT____AG______
51._ICS_95
AA______CC__AAGT____AG______
52._ICS_95
AA______CC__AAGT____AG______
53._GC-02-2-1-02
AACTGTGGCCACAAGTGGGTAGCTAACC
54._GC-02-2-1-02
__CTGTGGCCACAAGTGGGTAGCTAACC
55._GC-02-2-1-02
AACTGTGGCCACAAGTGGGTAGCTAACC
56._ICS_95
AA______CC__AAGT____AG______
57._RUQ_1144
______GGCCACAAGT____AGCT____
58._RUQ_1144
______GGCC________GT__CT____
59._RUQ_1144B
________CC____________CT____
60._RUQ_1144
________CC__AA______________
61._GC-02-002-1-2
AAAGACGGCCACAAACCCACAGAGAAGG
62._RUQ_1144
AAAGACGGCCACAAACCCACAGAGAAGG
63._MITC-000342
AAAGACGGCCACAAACCCACAGAGAAGG
64._ICS_95_Fld#_13_Plt#_1
AAAGACGGCCACAAACCCACAGAGAAGG
 4344454647484950515253545556
_Input profile
GTATCCAGAGAGCTCCGGGGGTTTCTCT
1._GC-01-128-7-05
GTATCCAGAGAGCTCCGGGGGTTTCTCT
2._GC-03-040-4-04
GTATCCAGAGAGCTCCGGGGGTTTCTCT
3._GC-03-040-4-04
GTATCCAGAGAGCTCCGGGGGTTTCTCT
4._GC-03-040-4-04
GTATCCAGAGAGCTCCGGGGGTTTCTCT
5._GC-03-040-4-04
GTATCCAGAGAGCTCCGGGGGTTTCTCT
6._GC-03-040-4-04
GTATCCAGAGAGCTCCGGGGGTTTCTCT
7._GC-01-128-7-05
GTATCCAGAGAGCTCCGGGGGTTTCTCT
8._GC-01-128-7-05
GTATCCAGAGAGCTCCGGGGGTTTCTCT
9._GC-01-128-7-05
GTATCCAGAGAGCTCCGGGGGTTTCTCT
10._GC-02-002-1-02
GTATCCAGAGAGCTCCGGGGGTTTCTCT
11._GC-03-039-4-03
GTATCCAGAGAGCTCCGGGGGTTTCTCT
12._GC-03-039-4-03
GTATCCAGAGAGCTCCGGGGGTTTCTCT
13._GC-03-039-4-03
GTATCCAGAGAGCTCCGGGGGTTTCTCT
14._GC-03-040-4-04
GTATCCAGAGAGCTCCGGGGGTTTCTCT
15._GC-01-128-7-05
GTATCCAGAGAGCTCCGGGGGTTTCTCT
16._GC-01-128-7-05
GTATCCAGAGAGCTCCGGGGGTTTCTCT
17._GC-03-039-4-03
GTATCCAGAGAGCTCCGGGGGTTTCTCT
18._GC-03-039-4-03
GTATCCAGAGAGCTCCGGGGGTTTCTCT
19._GC-03-039-4-03
GTATCCAGAGAGCTCCGGGGGTTTCTCT
20._GC-03-040-4-04
GTATCCAGAGAGCTCCGGGGGTTTCTCT
21._GC-03-039-4-03
GTATCCAGAGAGCTCCGGGGGTTTCTCT
22._GC-02-2-1-02
GTATCCAG__AGCTCCGGGGGTTTCTCT
23._ICS_95
____CC__________________CTCT
24._ICS_95
____CC__________________CTCT
25._ICS_95
____CC__________________CTCT
26._ICS_95
____CC__________________CTCT
27._ICS_95
____CC__________________CTCT
28._ICS_95
____CC__________________CTCT
29._ICS_95
____CC__________________CTCT
30._ICS_95
____CC__________________CTCT
31._ICS_95
____CC__________________CTCT
32._ICS_95
____CC__________________CTCT
33._ICS_95
____CC__________________CTCT
34._ICS_95
____CC__________________CTCT
35._ICS_95
____CC__________________CTCT
36._ICS_95
____CC__________________CTCT
37._ICS_95
____CC__________________CTCT
38._ICS_95
____CC__________________CTCT
39._ICS_95
____CC__________________CTCT
40._ICS_95
____CC__________________CTCT
41._ICS_95
____CC__________________CTCT
42._ICS_95
____CC__________________CTCT
43._ICS_95
____CC__________________CTCT
44._ICS_95
____CC__________________CTCT
45._ICS_95
____CC__________________CTCT
46._RUQ_1144
____CC__________________CTCT
47._ICS_95
____CC__________________CTCT
48._ICS_95
____CC__________________CTCT
49._ICS_95
____CC__________________CT__
50._ICS_95
____CC__________________CTCT
51._ICS_95
____CC__________________CTCT
52._ICS_95
____CC__________________CTCT
53._GC-02-2-1-02
GTATCCAGAGAGCTCCGGGGGTTTCTCT
54._GC-02-2-1-02
GTATCCAGAGAGCTCCGGGGGTTTCTCT
55._GC-02-2-1-02
GTATCCAGAGAGCTCCGGGGGTTTCT__
56._ICS_95
____CC__________________CTCT
57._RUQ_1144
GTAT____AG____________CTCT__
58._RUQ_1144
__AT__AG________________CT__
59._RUQ_1144B
________AG__________________
60._RUQ_1144
____________________________
61._GC-02-002-1-2
AC__GG__AGAGAG__GGGGACAGAGAG
62._RUQ_1144
AC__GG__AGAGAG__GGGGACAGAGAG
63._MITC-000342
AC__GG__AGAGAG__GGGGACAGAGAG
64._ICS_95_Fld#_13_Plt#_1
AC__GG__AGAGAG__GGGGACAGAGAG
 5758596061626364656667686970
_Input profile
GTAGCGCTTTACGGAAACGGGTTTAGCC
1._GC-01-128-7-05
GTAGCGCTTTACGGAAACGGGTTTAGCC
2._GC-03-040-4-04
GTAGCGCTTTACGGAAACGGGTTTAGCC
3._GC-03-040-4-04
GTAGCGCTTTACGGAAACGGGTTTAGCC
4._GC-03-040-4-04
GTAGCGCTTTACGGAAACGGGTTTAGCC
5._GC-03-040-4-04
GTAGCGCTTTACGGAAACGGGTTTAGCC
6._GC-03-040-4-04
GTAGCGCTTTACGGAAACGGGTTTAGCC
7._GC-01-128-7-05
GTAGCGCTTTACGGAAACGGGTTTAGCC
8._GC-01-128-7-05
GTAGCGCTTTACGGAAACGGGTTTAGCC
9._GC-01-128-7-05
GTAGCGCTTTACGGAAACGGGTTTAGCC
10._GC-02-002-1-02
GTAGCGCTTTACGGAAACGGGTTTAGCC
11._GC-03-039-4-03
GTAGCGCTTTACGGAAACGGGTTTAGCC
12._GC-03-039-4-03
GTAGCGCTTTACGGAAACGGGTTTAGCC
13._GC-03-039-4-03
GTAGCGCTTTACGGAAACGGGTTTAGCC
14._GC-03-040-4-04
GTAGCGCTTTACGGAAACGGGTTTAGCC
15._GC-01-128-7-05
GTAGCGCTTTACGGAAACGGGTTTAGCC
16._GC-01-128-7-05
GTAGCGCTTTACGGAAACGGGTTTAGCC
17._GC-03-039-4-03
GTAGCGCTTTACGGAAACGGGTTTAGCC
18._GC-03-039-4-03
GTAGCGCTTTACGGAAACGGGTTTAGCC
19._GC-03-039-4-03
GTAGCGCTTTACGGAAACGGGTTTAGCC
20._GC-03-040-4-04
GTAGCGCTTTACGGAAACGGGTTTAGCC
21._GC-03-039-4-03
GTAGCGCTTTACGGAAAC__GT__AGCC
22._GC-02-2-1-02
GTAGCGCTTTACGGAAACGGGTTTAGCC
23._ICS_95
____CG__TTACGG__ACGGGTTT____
24._ICS_95
____CG__TTACGG__ACGGGTTT____
25._ICS_95
____CG__TTACGG__ACGGGTTT____
26._ICS_95
____CG__TTACGG__ACGGGTTT____
27._ICS_95
____CG__TTACGG__ACGGGTTT____
28._ICS_95
____CG__TTACGG__ACGGGTTT____
29._ICS_95
____CG__TTACGG__ACGGGTTT____
30._ICS_95
____CG__TTACGG__ACGGGTTT____
31._ICS_95
____CG__TTACGG__ACGGGTTT____
32._ICS_95
____CG__TTACGG__ACGGGTTT____
33._ICS_95
____CG__TTACGG__ACGGGTTT____
34._ICS_95
____CG__TTACGG__ACGGGTTT____
35._ICS_95
____CG__TTACGG__ACGGGTTT____
36._ICS_95
____CG__TTACGG__ACGGGTTT____
37._ICS_95
____CG__TTACGG__ACGGGTTT____
38._ICS_95
____CG__TTACGG__ACGGGTTT____
39._ICS_95
____CG__TTACGG__ACGGGTTT____
40._ICS_95
____CG__TTACGG__ACGGGTTT____
41._ICS_95
____CG__TTACGG__ACGGGTTT____
42._ICS_95
____CG__TTACGG__ACGGGTTT____
43._ICS_95
____CG__TTACGG__ACGGGTTT____
44._ICS_95
____CG__TTACGG__ACGGGTTT____
45._ICS_95
____CG__TTACGG__ACGGGTTT____
46._RUQ_1144
____CG__TTACGG__ACGGGTTT____
47._ICS_95
____CG__TTACGG__AC__GT______
48._ICS_95
____CG__TTACGG__ACGGGTTT____
49._ICS_95
____CG__TTACGG__ACGGGTTT____
50._ICS_95
____CG__TTACGG__ACGGGTTT____
51._ICS_95
____CG__TTACGG__ACGGGTTT____
52._ICS_95
____CG__TTACGG__ACGGGTTT____
53._GC-02-2-1-02
GTAGCGCTTTACGGAAACGGGTTTAGCC
54._GC-02-2-1-02
GTAGCGCTTTACGGAAACGGGTTTAGCC
55._GC-02-2-1-02
GTAGCGCTTTACGGAAACGGGTTTAGCC
56._ICS_95
____GG__TTACGG__ACGGGTTT____
57._RUQ_1144
GTGGCGCTTTAC__AAACGGGTTTAG__
58._RUQ_1144
____CGCT__AC__AAACGG________
59._RUQ_1144B
__AG____________ACGG__TTAG__
60._RUQ_1144
__AG____________ACGG__TTAG__
61._GC-02-002-1-2
ACAGCGAGAAACGGAAACGGACAAAG__
62._RUQ_1144
ACAGCGAGAAACGGAAACGGACAAAG__
63._MITC-000342
ACAGCGAGAAACGGAAACGGACAAAG__
64._ICS_95_Fld#_13_Plt#_1
ACAGCGAGAAACGGAAACGGACAAAG__
 7172737475767778798081828384
_Input profile
CCTTACAGACAAAGCCCGCTAAACCTCT
1._GC-01-128-7-05
CCTTACAGACAAAGCCCGCTAAACCTCT
2._GC-03-040-4-04
CCTTACAGACAAAGCCCGCTAAACCTCT
3._GC-03-040-4-04
CCTTACAGACAAAGCCCGCTAAACCTCT
4._GC-03-040-4-04
CCTTACAGACAAAGCCCGCTAAACCTCT
5._GC-03-040-4-04
CCTTACAGACAAAGCCCGCTAAACCTCT
6._GC-03-040-4-04
CCTTACAGACAAAGCCCGCTAAACCTCT
7._GC-01-128-7-05
CCTTACAGACAAAGCCCGCTAAACCTCT
8._GC-01-128-7-05
CCTTACAGACAAAGCCCGCTAAACCTCT
9._GC-01-128-7-05
CCTTACAGACAAAGCCCGCTAAACCTCT
10._GC-02-002-1-02
CCTTACAGACAAAGCCCGCTAAACCTCT
11._GC-03-039-4-03
CCTTACAGACAAAGCCCGCTAAACCTCT
12._GC-03-039-4-03
CCTTACAGACAAAGCCCGCTAAACCTCT
13._GC-03-039-4-03
CCTTACAGACAAAGCCCGCTAAACCTCT
14._GC-03-040-4-04
CCTTACAGACAAAGCCCGCTAAACCTCT
15._GC-01-128-7-05
CCTTACAGACAAAGCCCGCTAAACCTCT
16._GC-01-128-7-05
CCTTACAGACAAAGCCCGCTAA__CTCT
17._GC-03-039-4-03
CCTTACAGACAAAGCCCGCTAAACCTCT
18._GC-03-039-4-03
CCTTACAGACAAAGCCCGCTAAACCTCT
19._GC-03-039-4-03
CCTTACAGACAAAGCCCGCTAAACCTCT
20._GC-03-040-4-04
CCTTACAGACAAAGCCCGCTAAACCTCT
21._GC-03-039-4-03
__TTACAGACAAAGCCCGCTAAACCTCT
22._GC-02-2-1-02
CCTTACAGACAAAGCCCGCTAAACCT__
23._ICS_95
__TT__________CCCG______CTCT
24._ICS_95
__TT__________CCCG______CTCT
25._ICS_95
__TT__________CCCG______CTCT
26._ICS_95
__TT__________CCCG______CTCT
27._ICS_95
__TT__________CCCG______CTCT
28._ICS_95
__TT__________CCCG______CTCT
29._ICS_95
__TT__________CCCG______CTCT
30._ICS_95
__TT__________CCCG______CTCT
31._ICS_95
__TT__________CCCG______CTCT
32._ICS_95
__TT__________CCCG______CTCT
33._ICS_95
__TT__________CCCG______CTCT
34._ICS_95
__TT__________CCCG______CTCT
35._ICS_95
__TT__________CCCG______CTCT
36._ICS_95
__TT__________CCCG______CTCT
37._ICS_95
__TT__________CCCG______CTCT
38._ICS_95
__TT__________CCCG______CTCT
39._ICS_95
__TT__________CCCG______CTCT
40._ICS_95
__TT__________CCCG______CTCT
41._ICS_95
__TT__________CCCG______CTCT
42._ICS_95
__TT__________CCCG______CTCT
43._ICS_95
__TT__________CCCG______CTCT
44._ICS_95
__TT__________CCCG______CTCT
45._ICS_95
__TT__________CCCG______CT__
46._RUQ_1144
__TT__________CC________CTCT
47._ICS_95
__TT__________CCCG______CTCT
48._ICS_95
__TT__________CCCG______CTCT
49._ICS_95
__TT__________CCCG______CT__
50._ICS_95
__TT__________CCGG______CTCT
51._ICS_95
__TT__________CCGG______CTCT
52._ICS_95
__TT__________CCGG______CTCT
53._GC-02-2-1-02
CCTTACAGACAAAGCCCGCTAAACCTCT
54._GC-02-2-1-02
CCTTACAGACAAAGCCCGCTAAACCTCT
55._GC-02-2-1-02
CCTTACAGACAAAGCCCGCTAAACCT__
56._ICS_95
__TT__________CCGG______CTCT
57._RUQ_1144
______________CCCG____ACCT__
58._RUQ_1144
CC______________CC________CT
59._RUQ_1144B
______________ACCG____AC____
60._RUQ_1144
______________ACCG____AC____
61._GC-02-002-1-2
__AAACAGACAA__CCCCAGAAACAGAG
62._RUQ_1144
__AAACAGACAA__CCCCAGAAACAGAG
63._MITC-000342
__AAACAGACAA__CCCCAGAAACAGAG
64._ICS_95_Fld#_13_Plt#_1
__AAACAGACAA__CCCCAGAAACAGAG
 858687888990919293     
_Input profile
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
1._GC-01-128-7-05
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
2._GC-03-040-4-04
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
3._GC-03-040-4-04
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
4._GC-03-040-4-04
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
5._GC-03-040-4-04
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
6._GC-03-040-4-04
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
7._GC-01-128-7-05
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
8._GC-01-128-7-05
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
9._GC-01-128-7-05
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
10._GC-02-002-1-02
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
11._GC-03-039-4-03
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
12._GC-03-039-4-03
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
13._GC-03-039-4-03
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
14._GC-03-040-4-04
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
15._GC-01-128-7-05
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
16._GC-01-128-7-05
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
17._GC-03-039-4-03
CTTTAGCTCT__TTATGGX_XX_XX_XX_XX_X
18._GC-03-039-4-03
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
19._GC-03-039-4-03
CT__AGCTCTGTTTATGGX_XX_XX_XX_XX_X
20._GC-03-040-4-04
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
21._GC-03-039-4-03
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
22._GC-02-2-1-02
CTTTAGCTCTGTTT____X_XX_XX_XX_XX_X
23._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
24._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
25._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
26._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
27._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
28._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
29._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
30._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
31._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
32._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
33._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
34._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
35._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
36._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
37._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
38._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
39._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
40._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
41._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
42._ICS_95
CT__AG__CT__TT____X_XX_XX_XX_XX_X
43._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
44._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
45._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
46._RUQ_1144
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
47._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
48._ICS_95
CT__AG__CT__TT____X_XX_XX_XX_XX_X
49._ICS_95
CT__AG__CT__TT____X_XX_XX_XX_XX_X
50._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
51._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
52._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
53._GC-02-2-1-02
CTTTAGCTCTGTTTCCCCX_XX_XX_XX_XX_X
54._GC-02-2-1-02
CTTTAGCTCT__TTCCCCX_XX_XX_XX_XX_X
55._GC-02-2-1-02
CTTTAGCTCT__TTCCCCX_XX_XX_XX_XX_X
56._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
57._RUQ_1144
____AG__CTGT______X_XX_XX_XX_XX_X
58._RUQ_1144
__________________X_XX_XX_XX_XX_X
59._RUQ_1144B
CT____CT__GT______X_XX_XX_XX_XX_X
60._RUQ_1144
CT____CT__GT______X_XX_XX_XX_XX_X
61._GC-02-002-1-2
__AA____AGAAAAATGGX_XX_XX_XX_XX_X
62._RUQ_1144
__AA____AGAAAAATGGX_XX_XX_XX_XX_X
63._MITC-000342
__AA____AGAAAAATGGX_XX_XX_XX_XX_X
64._ICS_95_Fld#_13_Plt#_1
__AA____AGAAAAATGGX_XX_XX_XX_XX_X

Input profile: ICS_95 GC-02-002-1-02

 
Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

1._ICS_95 GC-01-128-7-05

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

2._ICS_95 GC-03-040-4-04

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

3._ICS_95 GC-03-040-4-04

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

4._ICS_95 GC-03-040-4-04

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

5._ICS_95 GC-03-040-4-04

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

6._ICS_95 GC-03-040-4-04

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

7._ICS_95 GC-01-128-7-05

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

8._ICS_95 GC-01-128-7-05

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

9._ICS_95 GC-01-128-7-05

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

10._ICS_95 GC-02-002-1-02

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 16
Notes: 16
 Mars, 2018

11._ICS_95 GC-03-039-4-03

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

12._ICS_95 GC-03-039-4-03

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

13._ICS_95 GC-03-039-4-03

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

14._ICS_95 GC-03-040-4-04

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

15._ICS_95 GC-01-128-7-05

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

16._ICS_95 GC-01-128-7-05

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

17._ICS_95 GC-03-039-4-03

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

18._ICS_95 GC-03-039-4-03

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

19._ICS_95 GC-03-039-4-03

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14
 Mars, 2018

20._ICS_95 GC-03-040-4-04

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 15
Notes: 15
 Mars, 2018

21._ICS_95 GC-03-039-4-03

identical
90 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

22._ICS_95 GC-02-2-1-02

identical
89 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 2, Block: 1, Rep: 2, Tree: PL13
Notes: PL13 FP13
 Mars, 2018

23._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1705 2
 Dapeng Zhang, 2016

24._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 13
 Dapeng Zhang, 2016

25._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 11
 Dapeng Zhang, 2016

26._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 9
 Dapeng Zhang, 2016

27._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 5
 Dapeng Zhang, 2016

28._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 3
 Dapeng Zhang, 2016

29._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 1
 Dapeng Zhang, 2016

30._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 14
 Dapeng Zhang, 2016

31._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 10
 Dapeng Zhang, 2016

32._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 5
 Dapeng Zhang, 2016

33._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 1
 Dapeng Zhang, 2016

34._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 2102 2 > FP
 Dapeng Zhang, 2016

35._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 2102 16
 Dapeng Zhang, 2016

36._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 2102 9
 Dapeng Zhang, 2016

37._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1705 6
 Dapeng Zhang, 2016

38._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1705 5
 Dapeng Zhang, 2016

39._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1705 4
 Dapeng Zhang, 2016

40._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1705 3
 Dapeng Zhang, 2016

41._ICS_95

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1705 1
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016

42._ICS_95

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 3
 Dapeng Zhang, 2016

43._ICS_95

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 15
 Dapeng Zhang, 2016

44._ICS_95

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 7
 Dapeng Zhang, 2016

45._ICS_95

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 2102 13 > F
 Dapeng Zhang, 2016

46._ICS_95 RUQ_1144

identical
38 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

47._ICS_95

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 12
 Dapeng Zhang, 2016

48._ICS_95

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 2102 3 > FP
 Dapeng Zhang, 2016

49._ICS_95

identical
35 shared markers

Mars Center for Cocoa Science, Brazil
Location: 2102 1 > FP
 Dapeng Zhang, 2016

50._ICS_95

98.7 %
39 shared markers

Estation Experimental Tropical Pichilingue, Ecuador
 Dapeng Zhang, 2016

51._ICS_95

98.7 %
39 shared markers

Cocoa Research Institute of Ghana (CRIG), Ghana
Location: P26 56
 Dapeng Zhang, 2016

52._ICS_95

98.7 %
39 shared markers

Malaysian Cocoa Board (MCB), Malaysia
Location: Row 10 C0204 2A
 Dapeng Zhang, 2016

53._ICS_95 GC-02-2-1-02

97.8 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 2, Block: 1, Rep: 2, Tree: PL2
Notes: PL2 FP2
 Mars, 2018

54._ICS_95 GC-02-2-1-02

97.8 %
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 2, Block: 1, Rep: 2, Tree: PL3
Notes: PL3 FP1
 Mars, 2018

55._ICS_95 GC-02-2-1-02

97.8 %
89 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 2, Block: 1, Rep: 2, Tree: PL1
Notes: PL1 FP4
 Mars, 2018

56._ICS_95

97.4 %
39 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: San Juan Block1
 Dapeng Zhang, 2016

57._ICS_95 RUQ_1144

96.4 %
42 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

58._ICS_95 RUQ_1144

96.2 %
26 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Location: GBR207
 Jocelyn De Wever et al., 2019

59._ICS_95 RUQ_1144B

89.5 %
19 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

60._ICS_95 RUQ_1144

88.9 %
18 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

61._ICS_95 GC-02-002-1-2

55.6 %
80 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 2, Block: 1, Rep: 2, Tree: 13 > FP3
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

62._ICS_95 RUQ_1144

55.6 %
80 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

63._ICS_95 MITC-000342

55.6 %
80 shared markers

USDA-SHRS, United States of America
 Mars, 2018

64._ICS_95 ICS_95_Fld#_13_Plt#_1

55.6 %
80 shared markers

USDA-TARS, United States of America
Location: Field: 13, Tree: 1
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP316 15TcSNP521
16TcSNP860 17TcSNP1062 18TcSNP836 19TcSNP878 20TcSNP929
21TcSNP413 22TcSNP653 23TcSNP1149 24TcSNP174 25TcSNP32
26TcSNP372 27TcSNP448 28TcSNP872 29TcSNP953 30TcSNP1034
31TcSNP1175 32TcSNP1111 33TcSNP577 34TcSNP90 35TcSNP998
36TcSNP150 37TcSNP28 38TcSNP751 39TcSNP1484 40TcSNP602
41TcSNP561 42TcSNP894 43TcSNP1063 44TcSNP1126 45TcSNP1270
46TcSNP606 47TcSNP329 48TcSNP689 49TcSNP944 50TcSNP1242
51TcSNP1383 52TcSNP547 53TcSNP776 54TcSNP1309 55TcSNP151
56TcSNP1520 57TcSNP799 58TcSNP899 59TcSNP226 60TcSNP1439
61TcSNP1442 62TcSNP193 63TcSNP25 64TcSNP364 65TcSNP144
66TcSNP230 67TcSNP560 68TcSNP723 69TcSNP731 70TcSNP701
71TcSNP1041 72TcSNP917 73Tcm003s01336581 74Tcm003s07402719 75Tcm001s00947643
76Tcm006s26664133 77Tcm002s20575712 78TcSNP529 79TcSNP1458 80TcSNP60
81TcSNP430 82TcSNP823 83TcSNP619 84TcSNP994 85TcSNP1144
86TcSNP1156 87TcSNP469 88TcSNP999 89TcSNP242 90TcSNP1253
91TcSNP1414 92TcSNP154 93TcSNP240