SNP Profiles of ICS-95   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
AAAACTCCAGAGCTCCCTCTGGCTCCAT
1._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCAT
2._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCAT
3._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCAT
4._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCAT
5._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCAT
6._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCAT
7._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCAT
8._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCAT
9._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCAT
10._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCAT
11._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCAT
12._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCAT
13._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCAT
14._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCAT
15._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCT__AT
16._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCAT
17._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCAT
18._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCAT
19._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCAT
20._ICS_95___
AA__CTCCAGAGCTCCCTCTGGCTCCAT
21._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCAT
22._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCAT
23._ICS_95___
AAAACTCC________CTCTGG__CC__
24._ICS_95___
AAAACTCC________CTCTGG__CC__
25._ICS_95___
AAAACTCC________CTCTGG__CC__
26._ICS_95___
AAAACTCC________CTCTGG__CC__
27._ICS_95___
AAAACTCC________CTCTGG__CC__
28._ICS_95___
AAAACTCC________CTCTGG__CC__
29._ICS_95___
AAAACTCC________CTCTGG__CC__
30._ICS_95___
AAAACTCC________CTCTGG__CC__
31._ICS_95___
AAAACTCC________CTCTGG__CC__
32._ICS_95___
AAAACTCC________CTCTGG__CC__
33._ICS_95___
AAAACTCC________CTCTGG__CC__
34._ICS_95___
AAAACTCC________CTCTGG__CC__
35._ICS_95___
AAAACTCC________CTCTGG__CC__
36._ICS_95___
AAAACTCC________CTCTGG__CC__
37._ICS_95___
AAAACTCC________CTCTGG__CC__
38._ICS_95___
AAAACTCC________CTCTGG__CC__
39._ICS_95___
AAAACTCC________CTCTGG__CC__
40._ICS_95___
AAAACTCC________CTCTGG__CC__
41._ICS_95___
AAAACTCC________CTCTGG______
42._ICS_95___
AAAACTCC________CTCTGG__CC__
43._ICS_95___
AA__CTCC________CTCTGG__CC__
44._ICS_95___
AAAACTCC________CTCTGG__CC__
45._ICS_95___
AAAACTCC________CTCTGG__CC__
46._ICS_95___
AAAACTCC________CTCTGG__CC__
47._ICS_95___
AAAACTCC________CTCTGG__CC__
48._ICS_95___
AAAACTCC________CTCTGG__CC__
49._ICS_95___
AAAACTCC__________CTGG__CC__
50._ICS_95___
AAAACTCC________CTCTGG__CC__
51._ICS_95___
AAAACTCC________CTCTGG__CC__
52._ICS_95___
AAAACTCC________CTCTGG__CC__
53._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCAT
54._ICS_95___
AAAACTCCAGAGCTCCCTCTGGCTCCAT
55._ICS_95___
AAAACTCCAGAGCTCC__CTGGCTCCAT
56._ICS_95___
AAAACTCC________CTCTGG__CC__
57._ICS_95___
____CTCC____CC__CT____CTCC__
58._ICS_95___
______CC________CT______CC__
59._ICS_95___
______CC____CC______________
60._ICS_95___
______CC____CC______________
61._ICS_95___
AAAA__CCAGAG__GGAG__GGAGGGAT
62._ICS_95___
AAAA__CCAGAG__GGAG__GGAGGGAT
63._ICS_95___
AAAA__CCAGAG__GGAG__GGAGGGAT
64._ICS_95___
AAAA__CCAGAG__GGAG__GGAGGGAT
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
CCAAAAGGCGGGCTAGTTAGATATCGCG
1._ICS_95___
CCAAAAGGCGGGCTAGTTAGATATCGCG
2._ICS_95___
CCAAAAGGCGGGCTAGTTAGATATCGCG
3._ICS_95___
CCAAAAGGCGGGCTAGTTAGATATCGCG
4._ICS_95___
CCAAAAGGCGGGCTAGTTAGATATCGCG
5._ICS_95___
CCAAAAGGCGGGCTAGTTAGATATCGCG
6._ICS_95___
CCAAAAGGCGGGCTAGTTAGATATCGCG
7._ICS_95___
CCAAAAGGCGGGCTAGTTAGATATCGCG
8._ICS_95___
CCAAAAGGCGGGCTAGTTAGATATCGCG
9._ICS_95___
CCAAAAGGCGGGCTAGTTAGATATCGCG
10._ICS_95___
CCAAAAGGCGGGCTAGTTAGATATCGCG
11._ICS_95___
CCAAAAGGCGGGCTAGTTAGATATCGCG
12._ICS_95___
CCAAAAGGCGGGCTAGTTAGATATCGCG
13._ICS_95___
CCAAAAGGCGGGCTAGTTAGATATCGCG
14._ICS_95___
CCAAAAGGCGGGCTAGTTAGATATCGCG
15._ICS_95___
CCAAAAGGCGGGCTAGTTAGATATCGCG
16._ICS_95___
CCAAAAGGCGGGCTAGTTAGATATCGCG
17._ICS_95___
CCAAAAGGCGGGCTAGTTAGATATCGCG
18._ICS_95___
CCAAAAGGCGGGCTAGTTAGATATCGCG
19._ICS_95___
CCAAAAGGCGGGCTAGTTAGATATCGCG
20._ICS_95___
CCAAAAGGCGGGCTAGTTAGATATCGCG
21._ICS_95___
CCAAAAGGCGGGCTAGTTAGATATCGCG
22._ICS_95___
CCAAAAGGCGGGCTAGTTAGATATCGCG
23._ICS_95___
____AA____GG________ATAT__CG
24._ICS_95___
____AA____GG________ATAT__CG
25._ICS_95___
____AA____GG________ATAT__CG
26._ICS_95___
____AA____GG________ATAT__CG
27._ICS_95___
____AA____GG________ATAT__CG
28._ICS_95___
____AA____GG________ATAT__CG
29._ICS_95___
____AA____GG________ATAT__CG
30._ICS_95___
____AA____GG________ATAT__CG
31._ICS_95___
____AA____GG________ATAT__CG
32._ICS_95___
____AA____GG________ATAT__CG
33._ICS_95___
____AA____GG________ATAT__CG
34._ICS_95___
____AA____GG________ATAT__CG
35._ICS_95___
____AA____GG________ATAT__CG
36._ICS_95___
____AA____GG________ATAT__CG
37._ICS_95___
____AA____GG________ATAT__CG
38._ICS_95___
____AA____GG________ATAT__CG
39._ICS_95___
____AA____GG________ATAT__CG
40._ICS_95___
____AA____GG________ATAT__CG
41._ICS_95___
____AA____GG________ATAT__CG
42._ICS_95___
____AA____GG________ATAT__CG
43._ICS_95___
____AA____GG________ATAT__CG
44._ICS_95___
____AA____GG________ATAT__CG
45._ICS_95___
____AA____GG________ATAT__CG
46._ICS_95___
____AA____GG________ATAT__CG
47._ICS_95___
____AA____GG________ATAT__CG
48._ICS_95___
____AA____GG________ATAT__CG
49._ICS_95___
____AA____GG________ATAT__CG
50._ICS_95___
____AA____GG________ATAT__CG
51._ICS_95___
____AA____GG________ATAT__CG
52._ICS_95___
____AA____GG________ATAT__CG
53._ICS_95___
CCAAAAGGCGGGCTAGTTAGATATCGCG
54._ICS_95___
CCAAAAGGCGGGCTAGTTAGATATCGCG
55._ICS_95___
CCAAAAGGCGGGCTAGTTAGATATCGCG
56._ICS_95___
____AA____GG________ATAT__CG
57._ICS_95___
________CG________AG__ATCGCG
58._ICS_95___
__AG____CG__CT____AG__ATCGCG
59._ICS_95___
____AATT__________________CG
60._ICS_95___
____AATT__________________CG
61._ICS_95___
CCAGAACC__GGAGAAAAAGATATCGCG
62._ICS_95___
CCAGAACC__GGAGAAAAAGATATCGCG
63._ICS_95___
CCAGAACC__GGAGAAAAAGATATCGCG
64._ICS_95___
CCAGAACC__GGAGAAAAAGATATCGCG
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
AACTGTGGCCACAAGTGGGTAGCTAACC
1._ICS_95___
AACTGTGGCCACAAGTGGGTAGCTAACC
2._ICS_95___
AACTGTGGCCACAAGTGGGTAGCTAACC
3._ICS_95___
AACTGTGGCCACAAGTGGGTAGCTAACC
4._ICS_95___
AACTGTGGCCACAAGTGGGTAGCTAACC
5._ICS_95___
AACTGTGGCCACAAGTGGGTAGCTAACC
6._ICS_95___
AACTGTGGCCACAAGTGGGTAGCTAACC
7._ICS_95___
AACTGTGGCCACAAGTGGGTAGCTAACC
8._ICS_95___
AACTGTGGCCACAAGTGGGTAGCTAACC
9._ICS_95___
AACTGTGGCCACAAGTGGGTAGCTAACC
10._ICS_95___
AACTGTGGCCACAAGTGGGTAGCTAACC
11._ICS_95___
AACTGTGGCCACAAGTGGGTAGCTAACC
12._ICS_95___
AACTGTGGCCACAAGTGGGTAGCTAACC
13._ICS_95___
AACTGTGGCCACAAGTGGGTAGCTAACC
14._ICS_95___
AACTGTGGCCACAAGTGGGTAGCTAACC
15._ICS_95___
AACTGTGGCCACAAGTGGGTAGCTAACC
16._ICS_95___
AACTGTGGCCACAAGTGGGTAGCTAACC
17._ICS_95___
AACTGTGGCCACAAGTGGGTAGCTAACC
18._ICS_95___
__CTGTGGCCACAAGTGGGTAGCTAACC
19._ICS_95___
AACTGTGGCCACAAGTGGGTAGCTAACC
20._ICS_95___
AACTGTGGCCACAAGTGGGTAGCTAACC
21._ICS_95___
AACTGTGGCCACAAGTGGGTAGCTAACC
22._ICS_95___
AACTGTGGCCACAAGTGGGTAGCTAACC
23._ICS_95___
AA______CC__AAGT____AG______
24._ICS_95___
AA______CC__AAGT____AG______
25._ICS_95___
AA______CC__AAGT____AG______
26._ICS_95___
AA______CC__AAGT____AG______
27._ICS_95___
AA______CC__AAGT____AG______
28._ICS_95___
AA______CC__AAGT____AG______
29._ICS_95___
AA______CC__AAGT____AG______
30._ICS_95___
AA______CC__AAGT____AG______
31._ICS_95___
AA______CC__AAGT____AG______
32._ICS_95___
AA______CC__AAGT____AG______
33._ICS_95___
AA______CC__AAGT____AG______
34._ICS_95___
AA______CC__AAGT____AG______
35._ICS_95___
AA______CC__AAGT____AG______
36._ICS_95___
AA______CC__AAGT____AG______
37._ICS_95___
AA______CC__AAGT____AG______
38._ICS_95___
AA______CC__AAGT____AG______
39._ICS_95___
AA______CC__AAGT____AG______
40._ICS_95___
AA______CC__AAGT____AG______
41._ICS_95___
AA______CC__AAGT____AG______
42._ICS_95___
AA______CC__AAGT____AG______
43._ICS_95___
AA______CC__AAGT____AG______
44._ICS_95___
________CC__AAGT____AG______
45._ICS_95___
AA______CC__AAGT____AG______
46._ICS_95___
AA______CC__AAGT____AG______
47._ICS_95___
AA______CC__AAGT____AG______
48._ICS_95___
________CC__AAGT____AG______
49._ICS_95___
AA______CC__AAGT____AG______
50._ICS_95___
AA______CC__AAGT____AG______
51._ICS_95___
AA______CC__AAGT____AG______
52._ICS_95___
AA______CC__AAGT____AG______
53._ICS_95___
AACTGTGGCCACAAGTGGGTAGCTAACC
54._ICS_95___
__CTGTGGCCACAAGTGGGTAGCTAACC
55._ICS_95___
AACTGTGGCCACAAGTGGGTAGCTAACC
56._ICS_95___
AA______CC__AAGT____AG______
57._ICS_95___
______GGCCACAAGT____AGCT____
58._ICS_95___
______GGCC________GT__CT____
59._ICS_95___
________CC____________CT____
60._ICS_95___
________CC__AA______________
61._ICS_95___
AAAGACGGCCACAAACCCACAGAGAAGG
62._ICS_95___
AAAGACGGCCACAAACCCACAGAGAAGG
63._ICS_95___
AAAGACGGCCACAAACCCACAGAGAAGG
64._ICS_95___
AAAGACGGCCACAAACCCACAGAGAAGG
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
GTATCCAGAGAGCTCCGGGGGTTTCTCT
1._ICS_95___
GTATCCAGAGAGCTCCGGGGGTTTCTCT
2._ICS_95___
GTATCCAGAGAGCTCCGGGGGTTTCTCT
3._ICS_95___
GTATCCAGAGAGCTCCGGGGGTTTCTCT
4._ICS_95___
GTATCCAGAGAGCTCCGGGGGTTTCTCT
5._ICS_95___
GTATCCAGAGAGCTCCGGGGGTTTCTCT
6._ICS_95___
GTATCCAGAGAGCTCCGGGGGTTTCTCT
7._ICS_95___
GTATCCAGAGAGCTCCGGGGGTTTCTCT
8._ICS_95___
GTATCCAGAGAGCTCCGGGGGTTTCTCT
9._ICS_95___
GTATCCAGAGAGCTCCGGGGGTTTCTCT
10._ICS_95___
GTATCCAGAGAGCTCCGGGGGTTTCTCT
11._ICS_95___
GTATCCAGAGAGCTCCGGGGGTTTCTCT
12._ICS_95___
GTATCCAGAGAGCTCCGGGGGTTTCTCT
13._ICS_95___
GTATCCAGAGAGCTCCGGGGGTTTCTCT
14._ICS_95___
GTATCCAGAGAGCTCCGGGGGTTTCTCT
15._ICS_95___
GTATCCAGAGAGCTCCGGGGGTTTCTCT
16._ICS_95___
GTATCCAGAGAGCTCCGGGGGTTTCTCT
17._ICS_95___
GTATCCAGAGAGCTCCGGGGGTTTCTCT
18._ICS_95___
GTATCCAGAGAGCTCCGGGGGTTTCTCT
19._ICS_95___
GTATCCAGAGAGCTCCGGGGGTTTCTCT
20._ICS_95___
GTATCCAGAGAGCTCCGGGGGTTTCTCT
21._ICS_95___
GTATCCAGAGAGCTCCGGGGGTTTCTCT
22._ICS_95___
GTATCCAG__AGCTCCGGGGGTTTCTCT
23._ICS_95___
____CC__________________CTCT
24._ICS_95___
____CC__________________CTCT
25._ICS_95___
____CC__________________CTCT
26._ICS_95___
____CC__________________CTCT
27._ICS_95___
____CC__________________CTCT
28._ICS_95___
____CC__________________CTCT
29._ICS_95___
____CC__________________CTCT
30._ICS_95___
____CC__________________CTCT
31._ICS_95___
____CC__________________CTCT
32._ICS_95___
____CC__________________CTCT
33._ICS_95___
____CC__________________CTCT
34._ICS_95___
____CC__________________CTCT
35._ICS_95___
____CC__________________CTCT
36._ICS_95___
____CC__________________CTCT
37._ICS_95___
____CC__________________CTCT
38._ICS_95___
____CC__________________CTCT
39._ICS_95___
____CC__________________CTCT
40._ICS_95___
____CC__________________CTCT
41._ICS_95___
____CC__________________CTCT
42._ICS_95___
____CC__________________CTCT
43._ICS_95___
____CC__________________CTCT
44._ICS_95___
____CC__________________CTCT
45._ICS_95___
____CC__________________CTCT
46._ICS_95___
____CC__________________CTCT
47._ICS_95___
____CC__________________CTCT
48._ICS_95___
____CC__________________CTCT
49._ICS_95___
____CC__________________CT__
50._ICS_95___
____CC__________________CTCT
51._ICS_95___
____CC__________________CTCT
52._ICS_95___
____CC__________________CTCT
53._ICS_95___
GTATCCAGAGAGCTCCGGGGGTTTCTCT
54._ICS_95___
GTATCCAGAGAGCTCCGGGGGTTTCTCT
55._ICS_95___
GTATCCAGAGAGCTCCGGGGGTTTCT__
56._ICS_95___
____CC__________________CTCT
57._ICS_95___
GTAT____AG____________CTCT__
58._ICS_95___
__AT__AG________________CT__
59._ICS_95___
________AG__________________
60._ICS_95___
____________________________
61._ICS_95___
AC__GG__AGAGAG__GGGGACAGAGAG
62._ICS_95___
AC__GG__AGAGAG__GGGGACAGAGAG
63._ICS_95___
AC__GG__AGAGAG__GGGGACAGAGAG
64._ICS_95___
AC__GG__AGAGAG__GGGGACAGAGAG
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
GTAGCGCTTTACGGAAACGGGTTTAGCC
1._ICS_95___
GTAGCGCTTTACGGAAACGGGTTTAGCC
2._ICS_95___
GTAGCGCTTTACGGAAACGGGTTTAGCC
3._ICS_95___
GTAGCGCTTTACGGAAACGGGTTTAGCC
4._ICS_95___
GTAGCGCTTTACGGAAACGGGTTTAGCC
5._ICS_95___
GTAGCGCTTTACGGAAACGGGTTTAGCC
6._ICS_95___
GTAGCGCTTTACGGAAACGGGTTTAGCC
7._ICS_95___
GTAGCGCTTTACGGAAACGGGTTTAGCC
8._ICS_95___
GTAGCGCTTTACGGAAACGGGTTTAGCC
9._ICS_95___
GTAGCGCTTTACGGAAACGGGTTTAGCC
10._ICS_95___
GTAGCGCTTTACGGAAACGGGTTTAGCC
11._ICS_95___
GTAGCGCTTTACGGAAACGGGTTTAGCC
12._ICS_95___
GTAGCGCTTTACGGAAACGGGTTTAGCC
13._ICS_95___
GTAGCGCTTTACGGAAACGGGTTTAGCC
14._ICS_95___
GTAGCGCTTTACGGAAACGGGTTTAGCC
15._ICS_95___
GTAGCGCTTTACGGAAACGGGTTTAGCC
16._ICS_95___
GTAGCGCTTTACGGAAACGGGTTTAGCC
17._ICS_95___
GTAGCGCTTTACGGAAACGGGTTTAGCC
18._ICS_95___
GTAGCGCTTTACGGAAACGGGTTTAGCC
19._ICS_95___
GTAGCGCTTTACGGAAACGGGTTTAGCC
20._ICS_95___
GTAGCGCTTTACGGAAACGGGTTTAGCC
21._ICS_95___
GTAGCGCTTTACGGAAAC__GT__AGCC
22._ICS_95___
GTAGCGCTTTACGGAAACGGGTTTAGCC
23._ICS_95___
____CG__TTACGG__ACGGGTTT____
24._ICS_95___
____CG__TTACGG__ACGGGTTT____
25._ICS_95___
____CG__TTACGG__ACGGGTTT____
26._ICS_95___
____CG__TTACGG__ACGGGTTT____
27._ICS_95___
____CG__TTACGG__ACGGGTTT____
28._ICS_95___
____CG__TTACGG__ACGGGTTT____
29._ICS_95___
____CG__TTACGG__ACGGGTTT____
30._ICS_95___
____CG__TTACGG__ACGGGTTT____
31._ICS_95___
____CG__TTACGG__ACGGGTTT____
32._ICS_95___
____CG__TTACGG__ACGGGTTT____
33._ICS_95___
____CG__TTACGG__ACGGGTTT____
34._ICS_95___
____CG__TTACGG__ACGGGTTT____
35._ICS_95___
____CG__TTACGG__ACGGGTTT____
36._ICS_95___
____CG__TTACGG__ACGGGTTT____
37._ICS_95___
____CG__TTACGG__ACGGGTTT____
38._ICS_95___
____CG__TTACGG__ACGGGTTT____
39._ICS_95___
____CG__TTACGG__ACGGGTTT____
40._ICS_95___
____CG__TTACGG__ACGGGTTT____
41._ICS_95___
____CG__TTACGG__ACGGGTTT____
42._ICS_95___
____CG__TTACGG__ACGGGTTT____
43._ICS_95___
____CG__TTACGG__ACGGGTTT____
44._ICS_95___
____CG__TTACGG__ACGGGTTT____
45._ICS_95___
____CG__TTACGG__ACGGGTTT____
46._ICS_95___
____CG__TTACGG__ACGGGTTT____
47._ICS_95___
____CG__TTACGG__AC__GT______
48._ICS_95___
____CG__TTACGG__ACGGGTTT____
49._ICS_95___
____CG__TTACGG__ACGGGTTT____
50._ICS_95___
____CG__TTACGG__ACGGGTTT____
51._ICS_95___
____CG__TTACGG__ACGGGTTT____
52._ICS_95___
____CG__TTACGG__ACGGGTTT____
53._ICS_95___
GTAGCGCTTTACGGAAACGGGTTTAGCC
54._ICS_95___
GTAGCGCTTTACGGAAACGGGTTTAGCC
55._ICS_95___
GTAGCGCTTTACGGAAACGGGTTTAGCC
56._ICS_95___
____GG__TTACGG__ACGGGTTT____
57._ICS_95___
GTGGCGCTTTAC__AAACGGGTTTAG__
58._ICS_95___
____CGCT__AC__AAACGG________
59._ICS_95___
__AG____________ACGG__TTAG__
60._ICS_95___
__AG____________ACGG__TTAG__
61._ICS_95___
ACAGCGAGAAACGGAAACGGACAAAG__
62._ICS_95___
ACAGCGAGAAACGGAAACGGACAAAG__
63._ICS_95___
ACAGCGAGAAACGGAAACGGACAAAG__
64._ICS_95___
ACAGCGAGAAACGGAAACGGACAAAG__
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
_Input profile
CCTTACAGACAAAGCCCGCTAAACCTCT
1._ICS_95___
CCTTACAGACAAAGCCCGCTAAACCTCT
2._ICS_95___
CCTTACAGACAAAGCCCGCTAAACCTCT
3._ICS_95___
CCTTACAGACAAAGCCCGCTAAACCTCT
4._ICS_95___
CCTTACAGACAAAGCCCGCTAAACCTCT
5._ICS_95___
CCTTACAGACAAAGCCCGCTAAACCTCT
6._ICS_95___
CCTTACAGACAAAGCCCGCTAAACCTCT
7._ICS_95___
CCTTACAGACAAAGCCCGCTAAACCTCT
8._ICS_95___
CCTTACAGACAAAGCCCGCTAAACCTCT
9._ICS_95___
CCTTACAGACAAAGCCCGCTAAACCTCT
10._ICS_95___
CCTTACAGACAAAGCCCGCTAAACCTCT
11._ICS_95___
CCTTACAGACAAAGCCCGCTAAACCTCT
12._ICS_95___
CCTTACAGACAAAGCCCGCTAAACCTCT
13._ICS_95___
CCTTACAGACAAAGCCCGCTAAACCTCT
14._ICS_95___
CCTTACAGACAAAGCCCGCTAAACCTCT
15._ICS_95___
CCTTACAGACAAAGCCCGCTAAACCTCT
16._ICS_95___
CCTTACAGACAAAGCCCGCTAA__CTCT
17._ICS_95___
CCTTACAGACAAAGCCCGCTAAACCTCT
18._ICS_95___
CCTTACAGACAAAGCCCGCTAAACCTCT
19._ICS_95___
CCTTACAGACAAAGCCCGCTAAACCTCT
20._ICS_95___
CCTTACAGACAAAGCCCGCTAAACCTCT
21._ICS_95___
__TTACAGACAAAGCCCGCTAAACCTCT
22._ICS_95___
CCTTACAGACAAAGCCCGCTAAACCT__
23._ICS_95___
__TT__________CCCG______CTCT
24._ICS_95___
__TT__________CCCG______CTCT
25._ICS_95___
__TT__________CCCG______CTCT
26._ICS_95___
__TT__________CCCG______CTCT
27._ICS_95___
__TT__________CCCG______CTCT
28._ICS_95___
__TT__________CCCG______CTCT
29._ICS_95___
__TT__________CCCG______CTCT
30._ICS_95___
__TT__________CCCG______CTCT
31._ICS_95___
__TT__________CCCG______CTCT
32._ICS_95___
__TT__________CCCG______CTCT
33._ICS_95___
__TT__________CCCG______CTCT
34._ICS_95___
__TT__________CCCG______CTCT
35._ICS_95___
__TT__________CCCG______CTCT
36._ICS_95___
__TT__________CCCG______CTCT
37._ICS_95___
__TT__________CCCG______CTCT
38._ICS_95___
__TT__________CCCG______CTCT
39._ICS_95___
__TT__________CCCG______CTCT
40._ICS_95___
__TT__________CCCG______CTCT
41._ICS_95___
__TT__________CCCG______CTCT
42._ICS_95___
__TT__________CCCG______CTCT
43._ICS_95___
__TT__________CCCG______CTCT
44._ICS_95___
__TT__________CCCG______CTCT
45._ICS_95___
__TT__________CCCG______CT__
46._ICS_95___
__TT__________CC________CTCT
47._ICS_95___
__TT__________CCCG______CTCT
48._ICS_95___
__TT__________CCCG______CTCT
49._ICS_95___
__TT__________CCCG______CT__
50._ICS_95___
__TT__________CCGG______CTCT
51._ICS_95___
__TT__________CCGG______CTCT
52._ICS_95___
__TT__________CCGG______CTCT
53._ICS_95___
CCTTACAGACAAAGCCCGCTAAACCTCT
54._ICS_95___
CCTTACAGACAAAGCCCGCTAAACCTCT
55._ICS_95___
CCTTACAGACAAAGCCCGCTAAACCT__
56._ICS_95___
__TT__________CCGG______CTCT
57._ICS_95___
______________CCCG____ACCT__
58._ICS_95___
CC______________CC________CT
59._ICS_95___
______________ACCG____AC____
60._ICS_95___
______________ACCG____AC____
61._ICS_95___
__AAACAGACAA__CCCCAGAAACAGAG
62._ICS_95___
__AAACAGACAA__CCCCAGAAACAGAG
63._ICS_95___
__AAACAGACAA__CCCCAGAAACAGAG
64._ICS_95___
__AAACAGACAA__CCCCAGAAACAGAG
 85 86 87 88 89 90 91 92 93      
_Input profile
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
1._ICS_95___
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
2._ICS_95___
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
3._ICS_95___
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
4._ICS_95___
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
5._ICS_95___
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
6._ICS_95___
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
7._ICS_95___
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
8._ICS_95___
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
9._ICS_95___
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
10._ICS_95___
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
11._ICS_95___
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
12._ICS_95___
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
13._ICS_95___
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
14._ICS_95___
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
15._ICS_95___
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
16._ICS_95___
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
17._ICS_95___
CTTTAGCTCT__TTATGGX_XX_XX_XX_XX_X
18._ICS_95___
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
19._ICS_95___
CT__AGCTCTGTTTATGGX_XX_XX_XX_XX_X
20._ICS_95___
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
21._ICS_95___
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
22._ICS_95___
CTTTAGCTCTGTTT____X_XX_XX_XX_XX_X
23._ICS_95___
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
24._ICS_95___
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
25._ICS_95___
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
26._ICS_95___
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
27._ICS_95___
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
28._ICS_95___
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
29._ICS_95___
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
30._ICS_95___
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
31._ICS_95___
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
32._ICS_95___
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
33._ICS_95___
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
34._ICS_95___
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
35._ICS_95___
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
36._ICS_95___
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
37._ICS_95___
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
38._ICS_95___
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
39._ICS_95___
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
40._ICS_95___
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
41._ICS_95___
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
42._ICS_95___
CT__AG__CT__TT____X_XX_XX_XX_XX_X
43._ICS_95___
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
44._ICS_95___
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
45._ICS_95___
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
46._ICS_95___
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
47._ICS_95___
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
48._ICS_95___
CT__AG__CT__TT____X_XX_XX_XX_XX_X
49._ICS_95___
CT__AG__CT__TT____X_XX_XX_XX_XX_X
50._ICS_95___
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
51._ICS_95___
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
52._ICS_95___
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
53._ICS_95___
CTTTAGCTCTGTTTCCCCX_XX_XX_XX_XX_X
54._ICS_95___
CTTTAGCTCT__TTCCCCX_XX_XX_XX_XX_X
55._ICS_95___
CTTTAGCTCT__TTCCCCX_XX_XX_XX_XX_X
56._ICS_95___
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
57._ICS_95___
____AG__CTGT______X_XX_XX_XX_XX_X
58._ICS_95___
__________________X_XX_XX_XX_XX_X
59._ICS_95___
CT____CT__GT______X_XX_XX_XX_XX_X
60._ICS_95___
CT____CT__GT______X_XX_XX_XX_XX_X
61._ICS_95___
__AA____AGAAAAATGGX_XX_XX_XX_XX_X
62._ICS_95___
__AA____AGAAAAATGGX_XX_XX_XX_XX_X
63._ICS_95___
__AA____AGAAAAATGGX_XX_XX_XX_XX_X
64._ICS_95___
__AA____AGAAAAATGGX_XX_XX_XX_XX_X

Input profile: ICS_95 GC-02-002-1-02

 
Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

1._ICS_95 GC-01-128-7-05

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

2._ICS_95 GC-03-040-4-04

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

3._ICS_95 GC-03-040-4-04

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

4._ICS_95 GC-03-040-4-04

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

5._ICS_95 GC-03-040-4-04

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

6._ICS_95 GC-03-040-4-04

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

7._ICS_95 GC-01-128-7-05

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

8._ICS_95 GC-01-128-7-05

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

9._ICS_95 GC-01-128-7-05

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

10._ICS_95 GC-02-002-1-02

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 16
Notes: 16
 Mars, 2018

11._ICS_95 GC-03-039-4-03

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

12._ICS_95 GC-03-039-4-03

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

13._ICS_95 GC-03-039-4-03

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

14._ICS_95 GC-03-040-4-04

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

15._ICS_95 GC-01-128-7-05

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

16._ICS_95 GC-01-128-7-05

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

17._ICS_95 GC-03-039-4-03

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

18._ICS_95 GC-03-039-4-03

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

19._ICS_95 GC-03-039-4-03

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14
 Mars, 2018

20._ICS_95 GC-03-040-4-04

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 15
Notes: 15
 Mars, 2018

21._ICS_95 GC-03-039-4-03

identical
90 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

22._ICS_95 GC-02-2-1-02

identical
89 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 2, Block: 1, Rep: 2, Tree: PL13
Notes: PL13 FP13
 Mars, 2018

23._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1705 2
 Dapeng Zhang, 2016

24._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 13
 Dapeng Zhang, 2016

25._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 11
 Dapeng Zhang, 2016

26._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 9
 Dapeng Zhang, 2016

27._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 5
 Dapeng Zhang, 2016

28._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 3
 Dapeng Zhang, 2016

29._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 1
 Dapeng Zhang, 2016

30._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 14
 Dapeng Zhang, 2016

31._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 10
 Dapeng Zhang, 2016

32._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 5
 Dapeng Zhang, 2016

33._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 1
 Dapeng Zhang, 2016

34._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 2102 2 > FP
 Dapeng Zhang, 2016

35._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 2102 16
 Dapeng Zhang, 2016

36._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 2102 9
 Dapeng Zhang, 2016

37._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1705 6
 Dapeng Zhang, 2016

38._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1705 5
 Dapeng Zhang, 2016

39._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1705 4
 Dapeng Zhang, 2016

40._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1705 3
 Dapeng Zhang, 2016

41._ICS_95

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1705 1
 Dapeng Zhang, 2016

42._ICS_95

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 3
 Dapeng Zhang, 2016

43._ICS_95

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 15
 Dapeng Zhang, 2016

44._ICS_95

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 7
 Dapeng Zhang, 2016

45._ICS_95

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 2102 13 > F
 Dapeng Zhang, 2016

46._ICS_95 RUQ_1144

identical
38 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

47._ICS_95

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 12
 Dapeng Zhang, 2016

48._ICS_95

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 2102 3 > FP
 Dapeng Zhang, 2016

49._ICS_95

identical
35 shared markers

Mars Center for Cocoa Science, Brazil
Location: 2102 1 > FP
 Dapeng Zhang, 2016

50._ICS_95

98.7 %
39 shared markers

Estation Experimental Tropical Pichilingue, Ecuador
 Dapeng Zhang, 2016

51._ICS_95

98.7 %
39 shared markers

Cocoa Research Institute of Ghana (CRIG), Ghana
Location: P26 56
 Dapeng Zhang, 2016

52._ICS_95

98.7 %
39 shared markers

Malaysian Cocoa Board (MCB), Malaysia
Location: Row 10 C0204 2A
 Dapeng Zhang, 2016

53._ICS_95 GC-02-2-1-02

97.8 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 2, Block: 1, Rep: 2, Tree: PL2
Notes: PL2 FP2
 Mars, 2018

54._ICS_95 GC-02-2-1-02

97.8 %
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 2, Block: 1, Rep: 2, Tree: PL3
Notes: PL3 FP1
 Mars, 2018

55._ICS_95 GC-02-2-1-02

97.8 %
89 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 2, Block: 1, Rep: 2, Tree: PL1
Notes: PL1 FP4
 Mars, 2018

56._ICS_95

97.4 %
39 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: San Juan Block1
 Dapeng Zhang, 2016

57._ICS_95 RUQ_1144

96.4 %
42 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

58._ICS_95 RUQ_1144

96.2 %
26 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Location: GBR207
 Jocelyn De Wever et al., 2019

59._ICS_95 RUQ_1144B

89.5 %
19 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

60._ICS_95 RUQ_1144

88.9 %
18 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

61._ICS_95 GC-02-002-1-2

55.6 %
80 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 2, Block: 1, Rep: 2, Tree: 13 > FP3
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

62._ICS_95 RUQ_1144

55.6 %
80 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

63._ICS_95 MITC-000342

55.6 %
80 shared markers

USDA-SHRS, United States of America
 Mars, 2018

64._ICS_95 ICS_95_Fld#_13_Plt#_1

55.6 %
80 shared markers

USDA-TARS, United States of America
Location: Field: 13, Tree: 1
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP316 15TcSNP521
16TcSNP860 17TcSNP1062 18TcSNP836 19TcSNP878 20TcSNP929
21TcSNP413 22TcSNP653 23TcSNP1149 24TcSNP174 25TcSNP32
26TcSNP372 27TcSNP448 28TcSNP872 29TcSNP953 30TcSNP1034
31TcSNP1175 32TcSNP1111 33TcSNP577 34TcSNP90 35TcSNP998
36TcSNP150 37TcSNP28 38TcSNP751 39TcSNP1484 40TcSNP602
41TcSNP561 42TcSNP894 43TcSNP1063 44TcSNP1126 45TcSNP1270
46TcSNP606 47TcSNP329 48TcSNP689 49TcSNP944 50TcSNP1242
51TcSNP1383 52TcSNP547 53TcSNP776 54TcSNP1309 55TcSNP151
56TcSNP1520 57TcSNP799 58TcSNP899 59TcSNP226 60TcSNP1439
61TcSNP1442 62TcSNP193 63TcSNP25 64TcSNP364 65TcSNP144
66TcSNP230 67TcSNP560 68TcSNP723 69TcSNP731 70TcSNP701
71TcSNP1041 72TcSNP917 73Tcm003s01336581 74Tcm003s07402719 75Tcm001s00947643
76Tcm006s26664133 77Tcm002s20575712 78TcSNP529 79TcSNP1458 80TcSNP60
81TcSNP430 82TcSNP823 83TcSNP619 84TcSNP994 85TcSNP1144
86TcSNP1156 87TcSNP469 88TcSNP999 89TcSNP242 90TcSNP1253
91TcSNP1414 92TcSNP154 93TcSNP240