SNP Profiles of SCA 19   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
AACCCTAAGGGGCCCCCCCCGGTTCTTT
1._GC-03-004-1-04
AACCCTAAGGGGCCCCCCCCGGTTCTTT
2._GC-03-004-1-04
AACCCTAAGGGGCCCCCCCCGGTTCT__
3._SCA_19
AACCCTAA________CCCCGG__CT__
4._SCA_19
AACCCTAA________CCCCGG__CT__
5._SCA_19
AACCCTAA________CCCCGG__CT__
6._RUQ_46
____CCCC____CT__CC____TTTT__
7._GC-03-004-1-04
TTCCCCCCAAAATTTTCCTTAGTTTTTT
8._GC-03-004-1-04
TTCCCCCCAAAATTTTCCTTAGTTTTTT
9._GC-03-004-1-04
TTCCCCCCAAAATTTTCCTTAGTTTTTT
10._GC-03-004-1-04
TTCCCCCCAAAATTTTCCTTAGTTTTTT
11._GC-03-004-1-04
TTCCCCCCAAAATTTTCCTTAGTTTTTT
12._GC-03-004-1-04
TTCCCCCCAAAATTTTCCTTAGTTTTTT
13._GC-03-004-1-04
TTCCCCCCAAAATTTTCCTTAGTTTTTT
14._GC-03-004-1-04
TTCCCCCCAAAATTTTCCTTAGTTTTTT
15._GC-03-004-1-04
TTCCCCCCAAAATTTTCCTTAGTTTTTT
16._GC-03-004-1-04
TTCCCCCCAAAATTTTCCTTAGTTTTTT
17._GC-03-004-1-04
TTCCCCCCAAAATTTTCCTTAGTTTTTT
18._GC-03-004-1-04
TTCCCCCCAAAATTTTCCTTAGTTTTTT
19._SCA_19
TTCCCCCC________CCTTAG__TT__
20._SCA_19
TTCCCCCC________CCTTAG__TT__
21._SCA_19
TTCCCCCC________CCTTAG__TT__
22._SCA_19
TTCCCCCC________CCTTAG__TT__
23._SCA_19
TTCCCCCC________CCTTAG__TT__
24._SCA_19
TTCCCCCC________CCTTAG__TT__
25._SCA_19
TTCCCCCC________CCTTAG__TT__
26._SCA_19
TTCCCCCC________CCTTAG__TT__
27._SCA_19
TTCCCCCC________CCTTAG__TT__
28._SCA_19
TTCCCCCC________CCTTAG__TT__
29._SCA_19
TTCCCCCC________CCTTAG__TT__
30._RUQ_46
TTCCCCCC________CCTTAG__TT__
31._SCA_19
TTCCCCCC________CCTTAG__TT__
32._SCA_19
TTCCCCCC________CCTTAG__TT__
33._GC-03-4-1-4
TTCC__CCAAAA__AAGG__AGAAAAAA
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
AAACGGGGCGGGCTAATTGGTTAACCGG
1._GC-03-004-1-04
AAACGGGGCGGGCTAATTGGTTAACCGG
2._GC-03-004-1-04
AAACGGGGCGGGCTAATTGGTTAACCGG
3._SCA_19
____GG____GG________TTAA__GG
4._SCA_19
____GG____GG________TTAA__GG
5._SCA_19
____GG____GG________TTAA__GG
6._RUQ_46
________GG________GG__AAGGCC
7._GC-03-004-1-04
TTAAGGCCGGCCCCAACTGGAAAAGGCC
8._GC-03-004-1-04
TTAAGGCCGGCCCCAACTGGAAAAGGCC
9._GC-03-004-1-04
TTAAGGCCGGCCCCAACTGGAAAAGGCC
10._GC-03-004-1-04
TTAAGGCCGGCCCCAACTGGAAAAGGCC
11._GC-03-004-1-04
TTAAGGCCGGCCCCAACTGGAAAAGGCC
12._GC-03-004-1-04
TTAAGGCCGGCCCCAACTGGAAAAGGCC
13._GC-03-004-1-04
TTAAGGCCGGCCCCAACTGGAAAAGGCC
14._GC-03-004-1-04
TTAAGGCCGGCCCCAACTGGAAAAGGCC
15._GC-03-004-1-04
TTAAGGCCGGCCCCAACTGGAAAAGGCC
16._GC-03-004-1-04
TTAAGGCCGGCCCCAACTGGAAAAGGCC
17._GC-03-004-1-04
TTAAGGCCGGCCCCAACTGGAAAAGGCC
18._GC-03-004-1-04
TTAAGGCCGGCCCCAACTGGAAAAGGCC
19._SCA_19
____GG____CC________AAAA__CC
20._SCA_19
____GG____CC________AAAA__CC
21._SCA_19
____GG____CC________AAAA__CC
22._SCA_19
____GG____CC________AAAA__CC
23._SCA_19
____GG____CC________AAAA__CC
24._SCA_19
____GG____CC________AAAA__CC
25._SCA_19
____GG____CC________AAAA__CC
26._SCA_19
____GG____CC________AAAA__CC
27._SCA_19
____GG____CC________AAAA__CC
28._SCA_19
____GG____CC________AAAA__CC
29._SCA_19
____GG____CC________AAAA__CC
30._RUQ_46
____GG____CC________AAAA__CC
31._SCA_19
____GG____CC________AAAA__CC
32._SCA_19
____GG____CC________AAAA__CC
33._GC-03-4-1-4
AAAAGGGG__CCGGAAAGGGAAAACCGG
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
AATTGGGGGGCCAGGTGGTTAACCGGCC
1._GC-03-004-1-04
AATTGGGGGGCCAGGTGGTTAACCGGCC
2._GC-03-004-1-04
AATTGGGGGGCCAGGTGGTTAACCGGCC
3._SCA_19
AA______GG__AGGT____AA______
4._SCA_19
AA______GG__AGGT____AA______
5._SCA_19
AA______GG__AGGT____AA______
6._RUQ_46
______GGCCCCAAGG____AGCC____
7._GC-03-004-1-04
TTTTTTGGCCCCAAGGTTTTAGCCGGCG
8._GC-03-004-1-04
TTTTTTGGCCCCAAGGTTTTAGCCGGCG
9._GC-03-004-1-04
TTTTTTGGCCCCAAGGTTTTAGCCGGCG
10._GC-03-004-1-04
TTTTTTGGCCCCAAGGTTTTAGCCGGCG
11._GC-03-004-1-04
TTTTTTGGCCCCAAGGTTTTAGCCGGCG
12._GC-03-004-1-04
TTTTTTGGCCCCAAGGTTTTAGCCGGCG
13._GC-03-004-1-04
TTTTTTGGCCCCAAGGTTTTAGCCGGCG
14._GC-03-004-1-04
TTTTTTGGCCCCAAGGTTTTAGCCGGCG
15._GC-03-004-1-04
TTTTTTGGCCCCAAGGTTTTAGCCGGCG
16._GC-03-004-1-04
TTTTTTGGCCCCAAGGTTTTAGCCGGCG
17._GC-03-004-1-04
TTTTTTGGCCCCAAGGTTTTAGCCGGCG
18._GC-03-004-1-04
TTTTTTGGCCCCAAGGTTTTAGCCGGCG
19._SCA_19
TT______CC__AAGG____AG______
20._SCA_19
TT______CC__AAGG____AG______
21._SCA_19
TT______CC__AAGG____AG______
22._SCA_19
TT______CC__AAGG____AG______
23._SCA_19
TT______CC__AAGG____AG______
24._SCA_19
TT______CC__AAGG____AG______
25._SCA_19
TT______CC__AAGG____AG______
26._SCA_19
TT______CC__AAGG____AG______
27._SCA_19
TT______CC__AAGG____AG______
28._SCA_19
TT______CC__AAGG____AG______
29._SCA_19
TT______CC__AAGG____AG______
30._RUQ_46
TT______CC__AAGG____AG______
31._SCA_19
TT______CC__AAGG____AG______
32._SCA_19
TT______CC__AAGG____AG______
33._GC-03-4-1-4
TTAAAAGGCCCCAACCAAAAAGGGGGCG
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
GGTTTTAGAGAACCCCGGAATTTTCCCC
1._GC-03-004-1-04
GGTTTTAGAGAACCCCGGAATTTTCCCC
2._GC-03-004-1-04
GGTTTTAGAGAACCCCGGAATTTTCCCC
3._SCA_19
____TT__________________CCCC
4._SCA_19
____TT__________________CCCC
5._SCA_19
____TT__________________CCCC
6._RUQ_46
GGTT____AA____________CTTT__
7._GC-03-004-1-04
GGTTTTGGAAAACCAAAAAAGGTTTTCC
8._GC-03-004-1-04
GGTTTTGGAAAACCAAAAAAGGTTTTCC
9._GC-03-004-1-04
GGTTTTGGAAAACCAAAAAAGGTTTTCC
10._GC-03-004-1-04
GGTTTTGGAAAACCAAAAAAGGTTTTCC
11._GC-03-004-1-04
GGTTTTGGAAAACCAAAAAAGGTTTTCC
12._GC-03-004-1-04
GGTTTTGGAAAACCAAAAAAGGTTTTCC
13._GC-03-004-1-04
GGTTTTGGAAAACCAAAAAAGGTTTTCC
14._GC-03-004-1-04
GGTTTTGGAAAACCAAAAAAGGTTTTCC
15._GC-03-004-1-04
GGTTTTGGAAAACCAAAAAAGGTTTTCC
16._GC-03-004-1-04
GGTTTTGGAAAACCAAAAAAGG__TTCC
17._GC-03-004-1-04
GGTTTTGGAAAACCAAAAAAGGTTTTCC
18._GC-03-004-1-04
GGATTTGGAAAACCAAAAAAGGTTTTCC
19._SCA_19
____TT__________________TTCC
20._SCA_19
____TT__________________TTCC
21._SCA_19
____TT__________________TTCC
22._SCA_19
____TT__________________TTCC
23._SCA_19
____TT__________________TTCC
24._SCA_19
____TT__________________TTCC
25._SCA_19
____TT__________________TTCC
26._SCA_19
____TT__________________TTCC
27._SCA_19
____TT__________________TTCC
28._SCA_19
____TT__________________TTCC
29._SCA_19
____TT__________________TTCC
30._RUQ_46
____TT__________________TTCC
31._SCA_19
____TT__________________TTCC
32._SCA_19
____TT__________________TTCC
33._GC-03-4-1-4
CC__AA__AAAAGG__AAAACCAGAAGG
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
TTGGCGCCTTAAGGGGCCAGGGGTGGTT
1._GC-03-004-1-04
TTGGCGCCTTAAGGGGCCAGGGGTGGTT
2._GC-03-004-1-04
TTGGCGCCTTAAGGGGCCAGGGGTGGTT
3._SCA_19
____CG__TTAAGG__CCAGGGGT____
4._SCA_19
____CG__TTAAGG__CCAGGGGT____
5._SCA_19
____CG__TTAAGG__CCAGGGGT____
6._RUQ_46
TTGGCCCCTTCC__GGCCAAGGGGAA__
7._GC-03-004-1-04
TTGGCCCCTTCCCGGGACAAGGGGAACT
8._GC-03-004-1-04
TTGGCCCCTTCCCGGGACAAGGGGAACT
9._GC-03-004-1-04
TTGGCCCCTTCCCGGGACAAGGGGAACT
10._GC-03-004-1-04
TTGGCCCCTTCCCGGGACAAGGGGAACT
11._GC-03-004-1-04
TTGGCCCCTTCCCGGGACAAGGGGAACT
12._GC-03-004-1-04
TTGGCCCCTTCCCGGGACAAGGGGAACT
13._GC-03-004-1-04
TTGGCCCCTTCCCGGGACAAGGGGAACT
14._GC-03-004-1-04
TTGGCCCCTTCCCGGGACAAGGGGAACT
15._GC-03-004-1-04
TTGGCCCCTTCCCGGGACAAGGGGAACT
16._GC-03-004-1-04
TTGGCCCCTTCCCGGGACAAGGGGAACT
17._GC-03-004-1-04
TTGGCCCCTTCCCGGGACAA__GGAACT
18._GC-03-004-1-04
TTGGCCCCTTCCCGGGACAAGGGGAACT
19._SCA_19
____CC__TTCCCG__ACAAGGGG____
20._SCA_19
____CC__TTCCCG__ACAAGGGG____
21._SCA_19
____CC__TTCCCG__ACAAGGGG____
22._SCA_19
____CC__TTCCCG__ACAAGGGG____
23._SCA_19
____CC__TTCCCG__ACAAGGGG____
24._SCA_19
____CC__TTCCCG__ACAAGGGG____
25._SCA_19
____CC__TTCCCG__ACAAGGGG____
26._SCA_19
____CC__TTCCCG__ACAAGGGG____
27._SCA_19
____CC__TTCCCG__ACAAGGGG____
28._SCA_19
____CC__TTCCCG__ACAAGGGG____
29._SCA_19
____CC__TTCCCG__ACAAGGGG____
30._RUQ_46
____CC__TTCCCG__ACAAGGGG____
31._SCA_19
____CC__TTCCCG__ACAAGGGG____
32._SCA_19
____CC__TTCCCG__ACAA__GG____
33._GC-03-4-1-4
AAGGGGGGAACCCGGGACAACCCCAA__
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
_Input profile
CCAACCCCAGCCACAACCCGCCATCCCT
1._GC-03-004-1-04
CCAACCCCAGCCACAACCCGCCATCCCT
2._GC-03-004-1-04
CCAACCCCAGCCACAACCCGCCATCCCT
3._SCA_19
__AACC__________CCCG____CCCT
4._SCA_19
__AACC__________CCCG____CCCT
5._SCA_19
__AACC__________CCCG____CCCT
6._RUQ_46
________________AACC____TT__
7._GC-03-004-1-04
CGAACTCCGGCCCCAAAACCCCAATTCC
8._GC-03-004-1-04
CGAACTCCGGCCCCAAAACCCCAATTCC
9._GC-03-004-1-04
CGAACTCCGGCCCCAAAACCCCAATTCC
10._GC-03-004-1-04
CGAACTCCGGCCCCAAAACCCCAATTCC
11._GC-03-004-1-04
CGAACTCCGGCCCCAAAACCCCAATTCC
12._GC-03-004-1-04
CGAACTCCGGCCCCAAAACCCCAATTCC
13._GC-03-004-1-04
CGAACTCCGGCCCCAAAACCCCAATTCC
14._GC-03-004-1-04
CGAACTCCGGCCCCAAAACCCCAATTCC
15._GC-03-004-1-04
CGAACTCCGGCCCCAAAACCCCAATTCC
16._GC-03-004-1-04
CGAACTCCGGCCCCAAAACCCCAATTCC
17._GC-03-004-1-04
CGAACTCCGGCCCCAAAACCCCAATTCC
18._GC-03-004-1-04
CGAACTCCGGCCCCAAAACCCCAATTCC
19._SCA_19
__AACT__________AACC____TTCC
20._SCA_19
__AACT__________AACC____TTCC
21._SCA_19
__AACT__________AACC____TTCC
22._SCA_19
__AACT__________AACC____TTCC
23._SCA_19
__AACT__________AACC____TTCC
24._SCA_19
__AACT__________AACC____TTCC
25._SCA_19
__AACT__________AACC____TTCC
26._SCA_19
__AACT__________AACC____TTCC
27._SCA_19
__AACT__________AACC____TTCC
28._SCA_19
__AACT__________AACC____TTCC
29._SCA_19
__AACT__________AACC____TTCC
30._RUQ_46
__AGCT__________AACC____TTCC
31._SCA_19
__AGCT__________AACC____TTCC
32._SCA_19
__AACT__________AACC____TTCC
33._GC-03-4-1-4
____AGCCGGCCCC__AAGGGGAAAAGG
 85 86 87 88 89 90 91 92 93      
_Input profile
CCCTAACCCTGTTTTTGGX_XX_XX_XX_XX_X
1._GC-03-004-1-04
CCCTAACCCTGTTTTTGGX_XX_XX_XX_XX_X
2._GC-03-004-1-04
CCCTAACCCTGTTTTTGGX_XX_XX_XX_XX_X
3._SCA_19
CC__AA__CTGTTT____X_XX_XX_XX_XX_X
4._SCA_19
CC__AA__CTGTTT____X_XX_XX_XX_XX_X
5._SCA_19
CC__AA__CTGTTT____X_XX_XX_XX_XX_X
6._RUQ_46
____GGCCCTGG______X_XX_XX_XX_XX_X
7._GC-03-004-1-04
CCCCGGCCCTGGCCTTGGX_XX_XX_XX_XX_X
8._GC-03-004-1-04
CCCCGGCCCTGGCCTTGGX_XX_XX_XX_XX_X
9._GC-03-004-1-04
CCCCGGCCCTGGCCTTGGX_XX_XX_XX_XX_X
10._GC-03-004-1-04
CCCCGGCCCTGGCCTTGGX_XX_XX_XX_XX_X
11._GC-03-004-1-04
CCCCGGCCCTGGCCTTGGX_XX_XX_XX_XX_X
12._GC-03-004-1-04
CCCCGGCCCTGGCCTTGGX_XX_XX_XX_XX_X
13._GC-03-004-1-04
CCCCGGCCCTGGCCTTGGX_XX_XX_XX_XX_X
14._GC-03-004-1-04
CCCCGGCCCTGGCCTTGGX_XX_XX_XX_XX_X
15._GC-03-004-1-04
CCCCGGCCCTGGCCTTGGX_XX_XX_XX_XX_X
16._GC-03-004-1-04
CCCCGGCCCTGGCCTTGGX_XX_XX_XX_XX_X
17._GC-03-004-1-04
CCCCGGCCCTGGCCTTGGX_XX_XX_XX_XX_X
18._GC-03-004-1-04
CCCCGGCCCTGGCCTTGGX_XX_XX_XX_XX_X
19._SCA_19
CC__GG__CTGGCC____X_XX_XX_XX_XX_X
20._SCA_19
CC__GG__CTGGCC____X_XX_XX_XX_XX_X
21._SCA_19
CC__GG__CTGGCC____X_XX_XX_XX_XX_X
22._SCA_19
CC__GG__CTGGCC____X_XX_XX_XX_XX_X
23._SCA_19
CC__GG__CTGGCC____X_XX_XX_XX_XX_X
24._SCA_19
CC__GG__CTGGCC____X_XX_XX_XX_XX_X
25._SCA_19
CC__GG__CTGGCC____X_XX_XX_XX_XX_X
26._SCA_19
CC__GG__CTGGCC____X_XX_XX_XX_XX_X
27._SCA_19
CC__GG__CTGGCC____X_XX_XX_XX_XX_X
28._SCA_19
CC__GG__CTGGCC____X_XX_XX_XX_XX_X
29._SCA_19
CC__GG__CTGGCC____X_XX_XX_XX_XX_X
30._RUQ_46
CC__GG__CTGGCC____X_XX_XX_XX_XX_X
31._SCA_19
CC__GG__CTGGCC____X_XX_XX_XX_XX_X
32._SCA_19
CC__GG__CTGGCC____X_XX_XX_XX_XX_X
33._GC-03-4-1-4
__GG____AGCCGGAAGGX_XX_XX_XX_XX_X

Input profile: SCA_19 GC-03-004-1-04

 
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Mars Center for Cocoa Science, Brazil
Location: Tree: 16
Notes: 16
 Mars, 2018

1._SCA_19 GC-03-004-1-04

identical
93 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

2._SCA_19 GC-03-004-1-04

identical
92 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9 > FP1
 Mars, 2018

3._SCA_19

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 3104 9 > FP
 Dapeng Zhang, 2016

4._SCA_19

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 3104 16
 Dapeng Zhang, 2016

5._SCA_19

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 3104 8
 Dapeng Zhang, 2016

6._SCA_19 RUQ_46

59.5 %
42 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

7._SCA_19 GC-03-004-1-04

55.9 %
93 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6 > FP3
 Mars, 2018

8._SCA_19 GC-03-004-1-04

55.9 %
93 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

9._SCA_19 GC-03-004-1-04

55.9 %
93 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4 > FP4
 Mars, 2018

10._SCA_19 GC-03-004-1-04

55.9 %
93 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

11._SCA_19 GC-03-004-1-04

55.9 %
93 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

12._SCA_19 GC-03-004-1-04

55.9 %
93 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12 > FP2
 Mars, 2018

13._SCA_19 GC-03-004-1-04

55.9 %
93 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

14._SCA_19 GC-03-004-1-04

55.9 %
93 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14
 Mars, 2018

15._SCA_19 GC-03-004-1-04

55.9 %
93 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 15
Notes: 15
 Mars, 2018

16._SCA_19 GC-03-004-1-04

55.4 %
92 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

17._SCA_19 GC-03-004-1-04

55.4 %
92 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

18._SCA_19 GC-03-004-1-04

55.4 %
93 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

19._SCA_19

46.3 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 3104 4 > FP
 Dapeng Zhang, 2016

20._SCA_19

46.3 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 3104 6 > FP
 Dapeng Zhang, 2016

21._SCA_19

46.3 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 3104 12 > F
 Dapeng Zhang, 2016

22._SCA_19

46.3 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 3104 15
 Dapeng Zhang, 2016

23._SCA_19

46.3 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 3104 14
 Dapeng Zhang, 2016

24._SCA_19

46.3 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 3104 13
 Dapeng Zhang, 2016

25._SCA_19

46.3 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 3104 10
 Dapeng Zhang, 2016

26._SCA_19

46.3 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 3104 7
 Dapeng Zhang, 2016

27._SCA_19

46.3 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 3104 5
 Dapeng Zhang, 2016

28._SCA_19

46.3 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 3104 2
 Dapeng Zhang, 2016

29._SCA_19

46.3 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 3104 1
 Dapeng Zhang, 2016

30._SCA_19 RUQ_46

45 %
40 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

31._SCA_19

45 %
40 shared markers

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Marper D 748
 Dapeng Zhang, 2016

32._SCA_19

44.9 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 3104 11
 Dapeng Zhang, 2016

33._SCA_19 GC-03-4-1-4

32.9 %
79 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 3, Block: 1, Rep: 4, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

 

  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP1062 18TcSNP836 19TcSNP878 20TcSNP929
21TcSNP413 22TcSNP653 23TcSNP1149 24TcSNP174 25TcSNP32
26TcSNP372 27TcSNP448 28TcSNP872 29TcSNP953 30TcSNP1034
31TcSNP1175 32TcSNP1111 33TcSNP577 34TcSNP90 35TcSNP998
36TcSNP150 37TcSNP28 38TcSNP751 39TcSNP1484 40TcSNP602
41TcSNP561 42TcSNP894 43TcSNP1063 44TcSNP1126 45TcSNP1270
46TcSNP606 47TcSNP329 48TcSNP689 49TcSNP944 50TcSNP1242
51TcSNP1383 52TcSNP547 53TcSNP776 54TcSNP1309 55TcSNP151
56TcSNP1520 57TcSNP799 58TcSNP899 59TcSNP226 60TcSNP1439
61TcSNP1442 62TcSNP193 63TcSNP25 64TcSNP364 65TcSNP144
66TcSNP230 67TcSNP560 68TcSNP723 69TcSNP731 70TcSNP701
71TcSNP1041 72TcSNP645 73TcSNP917 74Tcm003s01336581 75Tcm003s07402719
76Tcm001s00947643 77Tcm006s26664133 78Tcm002s20575712 79TcSNP529 80TcSNP1458
81TcSNP60 82TcSNP430 83TcSNP619 84TcSNP994 85TcSNP1144
86TcSNP1156 87TcSNP469 88TcSNP999 89TcSNP242 90TcSNP1253
91TcSNP1414 92TcSNP154 93TcSNP240