SNP Profiles of ICS-95   View Data

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 Key

 1234567891011121314
_Input profile
AAAACTCCAGAGCTCCCTCTGGCTCCCC
1._GC-01-128-7-05
AAAACTCCAGAGCTCCCTCTGGCTCCCC
2._GC-03-040-4-04
AAAACTCCAGAGCTCCCTCTGGCTCCCC
3._GC-03-040-4-04
AAAACTCCAGAGCTCCCTCTGGCTCCCC
4._GC-03-040-4-04
AAAACTCCAGAGCTCCCTCTGGCTCCCC
5._GC-03-040-4-04
AAAACTCCAGAGCTCCCTCTGGCTCCCC
6._GC-03-040-4-04
AAAACTCCAGAGCTCCCTCTGGCTCCCC
7._GC-01-128-7-05
AAAACTCCAGAGCTCCCTCTGGCTCCCC
8._GC-01-128-7-05
AAAACTCCAGAGCTCCCTCTGGCTCCCC
9._GC-01-128-7-05
AAAACTCCAGAGCTCCCTCTGGCTCCCC
10._GC-02-002-1-02
AAAACTCCAGAGCTCCCTCTGGCTCCCC
11._GC-03-039-4-03
AAAACTCCAGAGCTCCCTCTGGCTCCCC
12._GC-03-039-4-03
AAAACTCCAGAGCTCCCTCTGGCTCCCC
13._GC-03-039-4-03
AAAACTCCAGAGCTCCCTCTGGCTCCCC
14._GC-03-040-4-04
AAAACTCCAGAGCTCCCTCTGGCTCCCC
15._GC-01-128-7-05
AAAACTCCAGAGCTCCCTCTGGCT__CC
16._GC-01-128-7-05
AAAACTCCAGAGCTCCCTCTGGCTCCCC
17._GC-02-002-1-02
AAAACTCCAGAGCTCCCTCTGGCTCC__
18._GC-03-039-4-03
AAAACTCCAGAGCTCCCTCTGGCTCCCC
19._GC-03-039-4-03
AAAACTCCAGAGCTCCCTCTGGCTCCCC
20._GC-03-040-4-04
AA__CTCCAGAGCTCCCTCTGGCTCCCC
21._GC-03-039-4-03
AAAACTCCAGAGCTCCCTCTGGCTCCCC
22._GC-02-2-1-02
AAAACTCCAGAGCTCCCTCTGGCTCCCC
23._ICS_95
AAAACTCC________CTCTGG__CC__
24._ICS_95
AAAACTCC________CTCTGG__CC__
25._ICS_95
AAAACTCC________CTCTGG__CC__
26._ICS_95
AAAACTCC________CTCTGG__CC__
27._ICS_95
AAAACTCC________CTCTGG__CC__
28._ICS_95
AAAACTCC________CTCTGG__CC__
29._ICS_95
AAAACTCC________CTCTGG__CC__
30._ICS_95
AAAACTCC________CTCTGG__CC__
31._ICS_95
AAAACTCC________CTCTGG__CC__
32._ICS_95
AAAACTCC________CTCTGG__CC__
33._ICS_95
AAAACTCC________CTCTGG__CC__
34._ICS_95
AAAACTCC________CTCTGG__CC__
35._ICS_95
AAAACTCC________CTCTGG__CC__
36._ICS_95
AAAACTCC________CTCTGG__CC__
37._ICS_95
AAAACTCC________CTCTGG__CC__
38._ICS_95
AAAACTCC________CTCTGG__CC__
39._ICS_95
AAAACTCC________CTCTGG__CC__
40._ICS_95
AAAACTCC________CTCTGG__CC__
41._ICS_95
AAAACTCC________CTCTGG__CC__
42._ICS_95
AAAACTCC________CTCTGG______
43._ICS_95
AAAACTCC________CTCTGG__CC__
44._ICS_95
AA__CTCC________CTCTGG__CC__
45._ICS_95
AAAACTCC________CTCTGG__CC__
46._ICS_95
AAAACTCC________CTCTGG__CC__
47._RUQ_1144
AAAACTCC________CTCTGG__CC__
48._ICS_95
AAAACTCC________CTCTGG__CC__
49._ICS_95
AAAACTCC__________CTGG__CC__
50._ICS_95
AAAACTCC________CTCTGG__CC__
51._ICS_95
AAAACTCC________CTCTGG__CC__
52._ICS_95
AAAACTCC________CTCTGG__CC__
53._GC-02-2-1-02
AAAACTCCAGAGCTCCCTCTGGCTCCCC
54._GC-02-2-1-02
AAAACTCCAGAGCTCCCTCTGGCTCCCC
55._GC-02-2-1-02
AAAACTCCAGAGCTCC__CTGGCTCCCC
56._ICS_95
AAAACTCC________CTCTGG__CC__
57._RUQ_1144
____CTCC____CC__CT____CTCC__
58._RUQ_1144
______CC________CT______CC__
59._RUQ_1144B
______CC____CC______________
60._RUQ_1144
______CC____CC______________
61._GC-02-002-1-2
AAAA__CCAGAG__GGAG__GGAGGGGG
62._RUQ_1144
AAAA__CCAGAG__GGAG__GGAGGGGG
63._MITC-000342
AAAA__CCAGAG__GGAG__GGAGGGGG
64._ICS_95_Fld#_13_Plt#_1
AAAA__CCAGAG__GGAG__GGAGGGGG
 1516171819202122232425262728
_Input profile
ATCCAAAAGGCGGGCTAGTTAGATATCG
1._GC-01-128-7-05
ATCCAAAAGGCGGGCTAGTTAGATATCG
2._GC-03-040-4-04
ATCCAAAAGGCGGGCTAGTTAGATATCG
3._GC-03-040-4-04
ATCCAAAAGGCGGGCTAGTTAGATATCG
4._GC-03-040-4-04
ATCCAAAAGGCGGGCTAGTTAGATATCG
5._GC-03-040-4-04
ATCCAAAAGGCGGGCTAGTTAGATATCG
6._GC-03-040-4-04
ATCCAAAAGGCGGGCTAGTTAGATATCG
7._GC-01-128-7-05
ATCCAAAAGGCGGGCTAGTTAGATATCG
8._GC-01-128-7-05
ATCCAAAAGGCGGGCTAGTTAGATATCG
9._GC-01-128-7-05
ATCCAAAAGGCGGGCTAGTTAGATATCG
10._GC-02-002-1-02
ATCCAAAAGGCGGGCTAGTTAGATATCG
11._GC-03-039-4-03
ATCCAAAAGGCGGGCTAGTTAGATATCG
12._GC-03-039-4-03
ATCCAAAAGGCGGGCTAGTTAGATATCG
13._GC-03-039-4-03
ATCCAAAAGGCGGGCTAGTTAGATATCG
14._GC-03-040-4-04
ATCCAAAAGGCGGGCTAGTTAGATATCG
15._GC-01-128-7-05
ATCCAAAAGGCGGGCTAGTTAGATATCG
16._GC-01-128-7-05
ATCCAAAAGGCGGGCTAGTTAGATATCG
17._GC-02-002-1-02
ATCCAAAAGGCGGGCTAGTTAGATATCG
18._GC-03-039-4-03
ATCCAAAAGGCGGGCTAGTTAGATATCG
19._GC-03-039-4-03
ATCCAAAAGGCGGGCTAGTTAGATATCG
20._GC-03-040-4-04
ATCCAAAAGGCGGGCTAGTTAGATATCG
21._GC-03-039-4-03
ATCCAAAAGGCGGGCTAGTTAGATATCG
22._GC-02-2-1-02
ATCCAAAAGGCGGGCTAGTTAGATATCG
23._ICS_95
______AA____GG________ATAT__
24._ICS_95
______AA____GG________ATAT__
25._ICS_95
______AA____GG________ATAT__
26._ICS_95
______AA____GG________ATAT__
27._ICS_95
______AA____GG________ATAT__
28._ICS_95
______AA____GG________ATAT__
29._ICS_95
______AA____GG________ATAT__
30._ICS_95
______AA____GG________ATAT__
31._ICS_95
______AA____GG________ATAT__
32._ICS_95
______AA____GG________ATAT__
33._ICS_95
______AA____GG________ATAT__
34._ICS_95
______AA____GG________ATAT__
35._ICS_95
______AA____GG________ATAT__
36._ICS_95
______AA____GG________ATAT__
37._ICS_95
______AA____GG________ATAT__
38._ICS_95
______AA____GG________ATAT__
39._ICS_95
______AA____GG________ATAT__
40._ICS_95
______AA____GG________ATAT__
41._ICS_95
______AA____GG________ATAT__
42._ICS_95
______AA____GG________ATAT__
43._ICS_95
______AA____GG________ATAT__
44._ICS_95
______AA____GG________ATAT__
45._ICS_95
______AA____GG________ATAT__
46._ICS_95
______AA____GG________ATAT__
47._RUQ_1144
______AA____GG________ATAT__
48._ICS_95
______AA____GG________ATAT__
49._ICS_95
______AA____GG________ATAT__
50._ICS_95
______AA____GG________ATAT__
51._ICS_95
______AA____GG________ATAT__
52._ICS_95
______AA____GG________ATAT__
53._GC-02-2-1-02
ATCCAAAAGGCGGGCTAGTTAGATATCG
54._GC-02-2-1-02
ATCCAAAAGGCGGGCTAGTTAGATATCG
55._GC-02-2-1-02
ATCCAAAAGGCGGGCTAGTTAGATATCG
56._ICS_95
______AA____GG________ATAT__
57._RUQ_1144
__________CG________AG__ATCG
58._RUQ_1144
____AG____CG__CT____AG__ATCG
59._RUQ_1144B
______AATT__________________
60._RUQ_1144
______AATT__________________
61._GC-02-002-1-2
ATCCAGAACC__GGAGAAAAAGATATCG
62._RUQ_1144
ATCCAGAACC__GGAGAAAAAGATATCG
63._MITC-000342
ATCCAGAACC__GGAGAAAAAGATATCG
64._ICS_95_Fld#_13_Plt#_1
ATCCAGAACC__GGAGAAAAAGATATCG
 2930313233343536373839404142
_Input profile
CGCTGTGGCCACAAGTGGGTAGCTAACC
1._GC-01-128-7-05
CGCTGTGGCCACAAGTGGGTAGCTAACC
2._GC-03-040-4-04
CGCTGTGGCCACAAGTGGGTAGCTAACC
3._GC-03-040-4-04
CGCTGTGGCCACAAGTGGGTAGCTAACC
4._GC-03-040-4-04
CGCTGTGGCCACAAGTGGGTAGCTAACC
5._GC-03-040-4-04
CGCTGTGGCCACAAGTGGGTAGCTAACC
6._GC-03-040-4-04
CGCTGTGGCCACAAGTGGGTAGCTAACC
7._GC-01-128-7-05
CGCTGTGGCCACAAGTGGGTAGCTAACC
8._GC-01-128-7-05
CGCTGTGGCCACAAGTGGGTAGCTAACC
9._GC-01-128-7-05
CGCTGTGGCCACAAGTGGGTAGCTAACC
10._GC-02-002-1-02
CGCTGTGGCCACAAGTGGGTAGCTAACC
11._GC-03-039-4-03
CGCTGTGGCCACAAGTGGGTAGCTAACC
12._GC-03-039-4-03
CGCTGTGGCCACAAGTGGGTAGCTAACC
13._GC-03-039-4-03
CGCTGTGGCCACAAGTGGGTAGCTAACC
14._GC-03-040-4-04
CGCTGTGGCCACAAGTGGGTAGCTAACC
15._GC-01-128-7-05
CGCTGTGGCCACAAGTGGGTAGCTAACC
16._GC-01-128-7-05
CGCTGTGGCCACAAGTGGGTAGCTAACC
17._GC-02-002-1-02
CGCTGTGGCCACAAGTGGGTAGCTAACC
18._GC-03-039-4-03
CGCTGTGGCCACAAGTGGGTAGCTAACC
19._GC-03-039-4-03
CGCTGTGGCCACAAGTGGGTAGCTAACC
20._GC-03-040-4-04
CGCTGTGGCCACAAGTGGGTAGCTAACC
21._GC-03-039-4-03
CGCTGTGGCCACAAGTGGGTAGCTAACC
22._GC-02-2-1-02
CGCTGTGGCCACAAGTGGGTAGCTAACC
23._ICS_95
CG______CC__AAGT____AG______
24._ICS_95
CG______CC__AAGT____AG______
25._ICS_95
CG______CC__AAGT____AG______
26._ICS_95
CG______CC__AAGT____AG______
27._ICS_95
CG______CC__AAGT____AG______
28._ICS_95
CG______CC__AAGT____AG______
29._ICS_95
CG______CC__AAGT____AG______
30._ICS_95
CG______CC__AAGT____AG______
31._ICS_95
CG______CC__AAGT____AG______
32._ICS_95
CG______CC__AAGT____AG______
33._ICS_95
CG______CC__AAGT____AG______
34._ICS_95
CG______CC__AAGT____AG______
35._ICS_95
CG______CC__AAGT____AG______
36._ICS_95
CG______CC__AAGT____AG______
37._ICS_95
CG______CC__AAGT____AG______
38._ICS_95
CG______CC__AAGT____AG______
39._ICS_95
CG______CC__AAGT____AG______
40._ICS_95
CG______CC__AAGT____AG______
41._ICS_95
CG______CC__AAGT____AG______
42._ICS_95
CG______CC__AAGT____AG______
43._ICS_95
CG______CC__AAGT____AG______
44._ICS_95
CG______CC__AAGT____AG______
45._ICS_95
CG______CC__AAGT____AG______
46._ICS_95
CG______CC__AAGT____AG______
47._RUQ_1144
CG______CC__AAGT____AG______
48._ICS_95
CG______CC__AAGT____AG______
49._ICS_95
CG______CC__AAGT____AG______
50._ICS_95
CG______CC__AAGT____AG______
51._ICS_95
CG______CC__AAGT____AG______
52._ICS_95
CG______CC__AAGT____AG______
53._GC-02-2-1-02
CGCTGTGGCCACAAGTGGGTAGCTAACC
54._GC-02-2-1-02
CGCTGTGGCCACAAGTGGGTAGCTAACC
55._GC-02-2-1-02
CGCTGTGGCCACAAGTGGGTAGCTAACC
56._ICS_95
CG______CC__AAGT____AG______
57._RUQ_1144
CG____GGCCACAAGT____AGCT____
58._RUQ_1144
CG____GGCC________GT__CT____
59._RUQ_1144B
CG______CC____________CT____
60._RUQ_1144
CG______CC__AA______________
61._GC-02-002-1-2
CGAGACGGCCACAAACCCACAGAGAAGG
62._RUQ_1144
CGAGACGGCCACAAACCCACAGAGAAGG
63._MITC-000342
CGAGACGGCCACAAACCCACAGAGAAGG
64._ICS_95_Fld#_13_Plt#_1
CGAGACGGCCACAAACCCACAGAGAAGG
 4344454647484950515253545556
_Input profile
GTATCCAGAGAGCTCCGGGGGTTTCTCT
1._GC-01-128-7-05
GTATCCAGAGAGCTCCGGGGGTTTCTCT
2._GC-03-040-4-04
GTATCCAGAGAGCTCCGGGGGTTTCTCT
3._GC-03-040-4-04
GTATCCAGAGAGCTCCGGGGGTTTCTCT
4._GC-03-040-4-04
GTATCCAGAGAGCTCCGGGGGTTTCTCT
5._GC-03-040-4-04
GTATCCAGAGAGCTCCGGGGGTTTCTCT
6._GC-03-040-4-04
GTATCCAGAGAGCTCCGGGGGTTTCTCT
7._GC-01-128-7-05
GTATCCAGAGAGCTCCGGGGGTTTCTCT
8._GC-01-128-7-05
GTATCCAGAGAGCTCCGGGGGTTTCTCT
9._GC-01-128-7-05
GTATCCAGAGAGCTCCGGGGGTTTCTCT
10._GC-02-002-1-02
GTATCCAGAGAGCTCCGGGGGTTTCTCT
11._GC-03-039-4-03
GTATCCAGAGAGCTCCGGGGGTTTCTCT
12._GC-03-039-4-03
GTATCCAGAGAGCTCCGGGGGTTTCTCT
13._GC-03-039-4-03
GTATCCAGAGAGCTCCGGGGGTTTCTCT
14._GC-03-040-4-04
GTATCCAGAGAGCTCCGGGGGTTTCTCT
15._GC-01-128-7-05
GTATCCAGAGAGCTCCGGGGGTTTCTCT
16._GC-01-128-7-05
GTATCCAGAGAGCTCCGGGGGTTTCTCT
17._GC-02-002-1-02
GTATCCAGAGAGCTCCGGGGGTTTCTCT
18._GC-03-039-4-03
GTATCCAGAGAGCTCCGGGGGTTTCTCT
19._GC-03-039-4-03
GTATCCAGAGAGCTCCGGGGGTTTCTCT
20._GC-03-040-4-04
GTATCCAGAGAGCTCCGGGGGTTTCTCT
21._GC-03-039-4-03
GTATCCAGAGAGCTCCGGGGGTTTCTCT
22._GC-02-2-1-02
GTATCCAG__AGCTCCGGGGGTTTCTCT
23._ICS_95
____CC__________________CTCT
24._ICS_95
____CC__________________CTCT
25._ICS_95
____CC__________________CTCT
26._ICS_95
____CC__________________CTCT
27._ICS_95
____CC__________________CTCT
28._ICS_95
____CC__________________CTCT
29._ICS_95
____CC__________________CTCT
30._ICS_95
____CC__________________CTCT
31._ICS_95
____CC__________________CTCT
32._ICS_95
____CC__________________CTCT
33._ICS_95
____CC__________________CTCT
34._ICS_95
____CC__________________CTCT
35._ICS_95
____CC__________________CTCT
36._ICS_95
____CC__________________CTCT
37._ICS_95
____CC__________________CTCT
38._ICS_95
____CC__________________CTCT
39._ICS_95
____CC__________________CTCT
40._ICS_95
____CC__________________CTCT
41._ICS_95
____CC__________________CTCT
42._ICS_95
____CC__________________CTCT
43._ICS_95
____CC__________________CTCT
44._ICS_95
____CC__________________CTCT
45._ICS_95
____CC__________________CTCT
46._ICS_95
____CC__________________CTCT
47._RUQ_1144
____CC__________________CTCT
48._ICS_95
____CC__________________CTCT
49._ICS_95
____CC__________________CT__
50._ICS_95
____CC__________________CTCT
51._ICS_95
____CC__________________CTCT
52._ICS_95
____CC__________________CTCT
53._GC-02-2-1-02
GTATCCAGAGAGCTCCGGGGGTTTCTCT
54._GC-02-2-1-02
GTATCCAGAGAGCTCCGGGGGTTTCTCT
55._GC-02-2-1-02
GTATCCAGAGAGCTCCGGGGGTTTCT__
56._ICS_95
____CC__________________CTCT
57._RUQ_1144
GTAT____AG____________CTCT__
58._RUQ_1144
__AT__AG________________CT__
59._RUQ_1144B
________AG__________________
60._RUQ_1144
____________________________
61._GC-02-002-1-2
AC__GG__AGAGAG__GGGGACAGAGAG
62._RUQ_1144
AC__GG__AGAGAG__GGGGACAGAGAG
63._MITC-000342
AC__GG__AGAGAG__GGGGACAGAGAG
64._ICS_95_Fld#_13_Plt#_1
AC__GG__AGAGAG__GGGGACAGAGAG
 5758596061626364656667686970
_Input profile
GTAGCGCTTTACGGAAACGGGTTTAGCC
1._GC-01-128-7-05
GTAGCGCTTTACGGAAACGGGTTTAGCC
2._GC-03-040-4-04
GTAGCGCTTTACGGAAACGGGTTTAGCC
3._GC-03-040-4-04
GTAGCGCTTTACGGAAACGGGTTTAGCC
4._GC-03-040-4-04
GTAGCGCTTTACGGAAACGGGTTTAGCC
5._GC-03-040-4-04
GTAGCGCTTTACGGAAACGGGTTTAGCC
6._GC-03-040-4-04
GTAGCGCTTTACGGAAACGGGTTTAGCC
7._GC-01-128-7-05
GTAGCGCTTTACGGAAACGGGTTTAGCC
8._GC-01-128-7-05
GTAGCGCTTTACGGAAACGGGTTTAGCC
9._GC-01-128-7-05
GTAGCGCTTTACGGAAACGGGTTTAGCC
10._GC-02-002-1-02
GTAGCGCTTTACGGAAACGGGTTTAGCC
11._GC-03-039-4-03
GTAGCGCTTTACGGAAACGGGTTTAGCC
12._GC-03-039-4-03
GTAGCGCTTTACGGAAACGGGTTTAGCC
13._GC-03-039-4-03
GTAGCGCTTTACGGAAACGGGTTTAGCC
14._GC-03-040-4-04
GTAGCGCTTTACGGAAACGGGTTTAGCC
15._GC-01-128-7-05
GTAGCGCTTTACGGAAACGGGTTTAGCC
16._GC-01-128-7-05
GTAGCGCTTTACGGAAACGGGTTTAGCC
17._GC-02-002-1-02
GTAGCGCTTTACGGAAACGGGTTTAGCC
18._GC-03-039-4-03
GTAGCGCTTTACGGAAACGGGTTTAGCC
19._GC-03-039-4-03
GTAGCGCTTTACGGAAACGGGTTTAGCC
20._GC-03-040-4-04
GTAGCGCTTTACGGAAACGGGTTTAGCC
21._GC-03-039-4-03
GTAGCGCTTTACGGAAAC__GT__AGCC
22._GC-02-2-1-02
GTAGCGCTTTACGGAAACGGGTTTAGCC
23._ICS_95
____CG__TTACGG__ACGGGTTT____
24._ICS_95
____CG__TTACGG__ACGGGTTT____
25._ICS_95
____CG__TTACGG__ACGGGTTT____
26._ICS_95
____CG__TTACGG__ACGGGTTT____
27._ICS_95
____CG__TTACGG__ACGGGTTT____
28._ICS_95
____CG__TTACGG__ACGGGTTT____
29._ICS_95
____CG__TTACGG__ACGGGTTT____
30._ICS_95
____CG__TTACGG__ACGGGTTT____
31._ICS_95
____CG__TTACGG__ACGGGTTT____
32._ICS_95
____CG__TTACGG__ACGGGTTT____
33._ICS_95
____CG__TTACGG__ACGGGTTT____
34._ICS_95
____CG__TTACGG__ACGGGTTT____
35._ICS_95
____CG__TTACGG__ACGGGTTT____
36._ICS_95
____CG__TTACGG__ACGGGTTT____
37._ICS_95
____CG__TTACGG__ACGGGTTT____
38._ICS_95
____CG__TTACGG__ACGGGTTT____
39._ICS_95
____CG__TTACGG__ACGGGTTT____
40._ICS_95
____CG__TTACGG__ACGGGTTT____
41._ICS_95
____CG__TTACGG__ACGGGTTT____
42._ICS_95
____CG__TTACGG__ACGGGTTT____
43._ICS_95
____CG__TTACGG__ACGGGTTT____
44._ICS_95
____CG__TTACGG__ACGGGTTT____
45._ICS_95
____CG__TTACGG__ACGGGTTT____
46._ICS_95
____CG__TTACGG__ACGGGTTT____
47._RUQ_1144
____CG__TTACGG__ACGGGTTT____
48._ICS_95
____CG__TTACGG__AC__GT______
49._ICS_95
____CG__TTACGG__ACGGGTTT____
50._ICS_95
____CG__TTACGG__ACGGGTTT____
51._ICS_95
____CG__TTACGG__ACGGGTTT____
52._ICS_95
____CG__TTACGG__ACGGGTTT____
53._GC-02-2-1-02
GTAGCGCTTTACGGAAACGGGTTTAGCC
54._GC-02-2-1-02
GTAGCGCTTTACGGAAACGGGTTTAGCC
55._GC-02-2-1-02
GTAGCGCTTTACGGAAACGGGTTTAGCC
56._ICS_95
____GG__TTACGG__ACGGGTTT____
57._RUQ_1144
GTGGCGCTTTAC__AAACGGGTTTAG__
58._RUQ_1144
____CGCT__AC__AAACGG________
59._RUQ_1144B
__AG____________ACGG__TTAG__
60._RUQ_1144
__AG____________ACGG__TTAG__
61._GC-02-002-1-2
ACAGCGAGAAACGGAAACGGACAAAG__
62._RUQ_1144
ACAGCGAGAAACGGAAACGGACAAAG__
63._MITC-000342
ACAGCGAGAAACGGAAACGGACAAAG__
64._ICS_95_Fld#_13_Plt#_1
ACAGCGAGAAACGGAAACGGACAAAG__
 7172737475767778798081828384
_Input profile
CCTTACAGACAAAGCCCGCTAAACCTCT
1._GC-01-128-7-05
CCTTACAGACAAAGCCCGCTAAACCTCT
2._GC-03-040-4-04
CCTTACAGACAAAGCCCGCTAAACCTCT
3._GC-03-040-4-04
CCTTACAGACAAAGCCCGCTAAACCTCT
4._GC-03-040-4-04
CCTTACAGACAAAGCCCGCTAAACCTCT
5._GC-03-040-4-04
CCTTACAGACAAAGCCCGCTAAACCTCT
6._GC-03-040-4-04
CCTTACAGACAAAGCCCGCTAAACCTCT
7._GC-01-128-7-05
CCTTACAGACAAAGCCCGCTAAACCTCT
8._GC-01-128-7-05
CCTTACAGACAAAGCCCGCTAAACCTCT
9._GC-01-128-7-05
CCTTACAGACAAAGCCCGCTAAACCTCT
10._GC-02-002-1-02
CCTTACAGACAAAGCCCGCTAAACCTCT
11._GC-03-039-4-03
CCTTACAGACAAAGCCCGCTAAACCTCT
12._GC-03-039-4-03
CCTTACAGACAAAGCCCGCTAAACCTCT
13._GC-03-039-4-03
CCTTACAGACAAAGCCCGCTAAACCTCT
14._GC-03-040-4-04
CCTTACAGACAAAGCCCGCTAAACCTCT
15._GC-01-128-7-05
CCTTACAGACAAAGCCCGCTAAACCTCT
16._GC-01-128-7-05
CCTTACAGACAAAGCCCGCTAA__CTCT
17._GC-02-002-1-02
CCTTACAGACAAAGCCCGCTAAACCTCT
18._GC-03-039-4-03
CCTTACAGACAAAGCCCGCTAAACCTCT
19._GC-03-039-4-03
CCTTACAGACAAAGCCCGCTAAACCTCT
20._GC-03-040-4-04
CCTTACAGACAAAGCCCGCTAAACCTCT
21._GC-03-039-4-03
__TTACAGACAAAGCCCGCTAAACCTCT
22._GC-02-2-1-02
CCTTACAGACAAAGCCCGCTAAACCT__
23._ICS_95
__TT__________CCCG______CTCT
24._ICS_95
__TT__________CCCG______CTCT
25._ICS_95
__TT__________CCCG______CTCT
26._ICS_95
__TT__________CCCG______CTCT
27._ICS_95
__TT__________CCCG______CTCT
28._ICS_95
__TT__________CCCG______CTCT
29._ICS_95
__TT__________CCCG______CTCT
30._ICS_95
__TT__________CCCG______CTCT
31._ICS_95
__TT__________CCCG______CTCT
32._ICS_95
__TT__________CCCG______CTCT
33._ICS_95
__TT__________CCCG______CTCT
34._ICS_95
__TT__________CCCG______CTCT
35._ICS_95
__TT__________CCCG______CTCT
36._ICS_95
__TT__________CCCG______CTCT
37._ICS_95
__TT__________CCCG______CTCT
38._ICS_95
__TT__________CCCG______CTCT
39._ICS_95
__TT__________CCCG______CTCT
40._ICS_95
__TT__________CCCG______CTCT
41._ICS_95
__TT__________CCCG______CTCT
42._ICS_95
__TT__________CCCG______CTCT
43._ICS_95
__TT__________CCCG______CTCT
44._ICS_95
__TT__________CCCG______CTCT
45._ICS_95
__TT__________CCCG______CTCT
46._ICS_95
__TT__________CCCG______CT__
47._RUQ_1144
__TT__________CC________CTCT
48._ICS_95
__TT__________CCCG______CTCT
49._ICS_95
__TT__________CCCG______CT__
50._ICS_95
__TT__________CCGG______CTCT
51._ICS_95
__TT__________CCGG______CTCT
52._ICS_95
__TT__________CCGG______CTCT
53._GC-02-2-1-02
CCTTACAGACAAAGCCCGCTAAACCTCT
54._GC-02-2-1-02
CCTTACAGACAAAGCCCGCTAAACCTCT
55._GC-02-2-1-02
CCTTACAGACAAAGCCCGCTAAACCT__
56._ICS_95
__TT__________CCGG______CTCT
57._RUQ_1144
______________CCCG____ACCT__
58._RUQ_1144
CC______________CC________CT
59._RUQ_1144B
______________ACCG____AC____
60._RUQ_1144
______________ACCG____AC____
61._GC-02-002-1-2
__AAACAGACAA__CCCCAGAAACAGAG
62._RUQ_1144
__AAACAGACAA__CCCCAGAAACAGAG
63._MITC-000342
__AAACAGACAA__CCCCAGAAACAGAG
64._ICS_95_Fld#_13_Plt#_1
__AAACAGACAA__CCCCAGAAACAGAG
 858687888990919293     
_Input profile
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
1._GC-01-128-7-05
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
2._GC-03-040-4-04
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
3._GC-03-040-4-04
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
4._GC-03-040-4-04
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
5._GC-03-040-4-04
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
6._GC-03-040-4-04
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
7._GC-01-128-7-05
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
8._GC-01-128-7-05
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
9._GC-01-128-7-05
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
10._GC-02-002-1-02
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
11._GC-03-039-4-03
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
12._GC-03-039-4-03
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
13._GC-03-039-4-03
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
14._GC-03-040-4-04
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
15._GC-01-128-7-05
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
16._GC-01-128-7-05
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
17._GC-02-002-1-02
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
18._GC-03-039-4-03
CTTTAGCTCT__TTATGGX_XX_XX_XX_XX_X
19._GC-03-039-4-03
CT__AGCTCTGTTTATGGX_XX_XX_XX_XX_X
20._GC-03-040-4-04
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
21._GC-03-039-4-03
CTTTAGCTCTGTTTATGGX_XX_XX_XX_XX_X
22._GC-02-2-1-02
CTTTAGCTCTGTTT____X_XX_XX_XX_XX_X
23._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
24._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
25._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
26._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
27._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
28._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
29._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
30._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
31._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
32._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
33._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
34._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
35._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
36._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
37._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
38._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
39._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
40._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
41._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
42._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
43._ICS_95
CT__AG__CT__TT____X_XX_XX_XX_XX_X
44._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
45._ICS_95
CT__AG__CT__TT____X_XX_XX_XX_XX_X
46._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
47._RUQ_1144
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
48._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
49._ICS_95
CT__AG__CT__TT____X_XX_XX_XX_XX_X
50._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
51._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
52._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
53._GC-02-2-1-02
CTTTAGCTCTGTTTCCCCX_XX_XX_XX_XX_X
54._GC-02-2-1-02
CTTTAGCTCT__TTCCCCX_XX_XX_XX_XX_X
55._GC-02-2-1-02
CTTTAGCTCT__TTCCCCX_XX_XX_XX_XX_X
56._ICS_95
CT__AG__CTGTTT____X_XX_XX_XX_XX_X
57._RUQ_1144
____AG__CTGT______X_XX_XX_XX_XX_X
58._RUQ_1144
__________________X_XX_XX_XX_XX_X
59._RUQ_1144B
CT____CT__GT______X_XX_XX_XX_XX_X
60._RUQ_1144
CT____CT__GT______X_XX_XX_XX_XX_X
61._GC-02-002-1-2
__AA____AGAAAAATGGX_XX_XX_XX_XX_X
62._RUQ_1144
__AA____AGAAAAATGGX_XX_XX_XX_XX_X
63._MITC-000342
__AA____AGAAAAATGGX_XX_XX_XX_XX_X
64._ICS_95_Fld#_13_Plt#_1
__AA____AGAAAAATGGX_XX_XX_XX_XX_X

Input profile: ICS_95 GC-03-039-4-03

 
Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

1._ICS_95 GC-01-128-7-05

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

2._ICS_95 GC-03-040-4-04

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

3._ICS_95 GC-03-040-4-04

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

4._ICS_95 GC-03-040-4-04

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

5._ICS_95 GC-03-040-4-04

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

6._ICS_95 GC-03-040-4-04

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

7._ICS_95 GC-01-128-7-05

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

8._ICS_95 GC-01-128-7-05

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

9._ICS_95 GC-01-128-7-05

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

10._ICS_95 GC-02-002-1-02

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 16
Notes: 16
 Mars, 2018

11._ICS_95 GC-03-039-4-03

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

12._ICS_95 GC-03-039-4-03

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

13._ICS_95 GC-03-039-4-03

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

14._ICS_95 GC-03-040-4-04

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

15._ICS_95 GC-01-128-7-05

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

16._ICS_95 GC-01-128-7-05

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

17._ICS_95 GC-02-002-1-02

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

18._ICS_95 GC-03-039-4-03

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

19._ICS_95 GC-03-039-4-03

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14
 Mars, 2018

20._ICS_95 GC-03-040-4-04

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 15
Notes: 15
 Mars, 2018

21._ICS_95 GC-03-039-4-03

identical
90 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

22._ICS_95 GC-02-2-1-02

identical
89 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 2, Block: 1, Rep: 2, Tree: PL13
Notes: PL13 FP13
 Mars, 2018

23._ICS_95

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1705 2
 Dapeng Zhang, 2016

24._ICS_95

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 13
 Dapeng Zhang, 2016

25._ICS_95

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 11
 Dapeng Zhang, 2016

26._ICS_95

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 9
 Dapeng Zhang, 2016

27._ICS_95

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 5
 Dapeng Zhang, 2016

28._ICS_95

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 3
 Dapeng Zhang, 2016

29._ICS_95

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 1
 Dapeng Zhang, 2016

30._ICS_95

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 14
 Dapeng Zhang, 2016

31._ICS_95

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 10
 Dapeng Zhang, 2016

32._ICS_95

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 7
 Dapeng Zhang, 2016

33._ICS_95

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 5
 Dapeng Zhang, 2016

34._ICS_95

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 1
 Dapeng Zhang, 2016

35._ICS_95

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 2102 2 > FP
 Dapeng Zhang, 2016

36._ICS_95

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 2102 16
 Dapeng Zhang, 2016

37._ICS_95

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 2102 9
 Dapeng Zhang, 2016

38._ICS_95

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1705 6
 Dapeng Zhang, 2016

39._ICS_95

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1705 5
 Dapeng Zhang, 2016

40._ICS_95

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1705 4
 Dapeng Zhang, 2016

41._ICS_95

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1705 3
 Dapeng Zhang, 2016

42._ICS_95

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1705 1
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016

43._ICS_95

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 3
 Dapeng Zhang, 2016

44._ICS_95

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 15
 Dapeng Zhang, 2016

45._ICS_95

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 2102 3 > FP
 Dapeng Zhang, 2016

46._ICS_95

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 2102 13 > F
 Dapeng Zhang, 2016

47._ICS_95 RUQ_1144

identical
37 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

48._ICS_95

identical
36 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 12
 Dapeng Zhang, 2016

49._ICS_95

identical
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: 2102 1 > FP
 Dapeng Zhang, 2016

50._ICS_95

98.7 %
38 shared markers

Estation Experimental Tropical Pichilingue, Ecuador
 Dapeng Zhang, 2016

51._ICS_95

98.7 %
38 shared markers

Cocoa Research Institute of Ghana (CRIG), Ghana
Location: P26 56
 Dapeng Zhang, 2016

52._ICS_95

98.7 %
38 shared markers

Malaysian Cocoa Board (MCB), Malaysia
Location: Row 10 C0204 2A
 Dapeng Zhang, 2016

53._ICS_95 GC-02-2-1-02

97.8 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 2, Block: 1, Rep: 2, Tree: PL2
Notes: PL2 FP2
 Mars, 2018

54._ICS_95 GC-02-2-1-02

97.8 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 2, Block: 1, Rep: 2, Tree: PL3
Notes: PL3 FP1
 Mars, 2018

55._ICS_95 GC-02-2-1-02

97.8 %
89 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 2, Block: 1, Rep: 2, Tree: PL1
Notes: PL1 FP4
 Mars, 2018

56._ICS_95

97.4 %
38 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: San Juan Block1
 Dapeng Zhang, 2016

57._ICS_95 RUQ_1144

96.4 %
42 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

58._ICS_95 RUQ_1144

96.2 %
26 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Location: GBR207
 Jocelyn De Wever et al., 2019

59._ICS_95 RUQ_1144B

89.5 %
19 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

60._ICS_95 RUQ_1144

88.9 %
18 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

61._ICS_95 GC-02-002-1-2

54.4 %
80 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 2, Block: 1, Rep: 2, Tree: 13 > FP3
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

62._ICS_95 RUQ_1144

54.4 %
80 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

63._ICS_95 MITC-000342

54.4 %
80 shared markers

USDA-SHRS, United States of America
 Mars, 2018

64._ICS_95 ICS_95_Fld#_13_Plt#_1

54.4 %
80 shared markers

USDA-TARS, United States of America
Location: Field: 13, Tree: 1
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP860 18TcSNP1062 19TcSNP836 20TcSNP878
21TcSNP929 22TcSNP413 23TcSNP653 24TcSNP1149 25TcSNP174
26TcSNP32 27TcSNP372 28TcSNP448 29TcSNP872 30TcSNP1034
31TcSNP1175 32TcSNP1111 33TcSNP577 34TcSNP90 35TcSNP998
36TcSNP150 37TcSNP28 38TcSNP751 39TcSNP1484 40TcSNP602
41TcSNP561 42TcSNP894 43TcSNP1063 44TcSNP1126 45TcSNP1270
46TcSNP606 47TcSNP329 48TcSNP689 49TcSNP944 50TcSNP1242
51TcSNP1383 52TcSNP547 53TcSNP776 54TcSNP1309 55TcSNP151
56TcSNP1520 57TcSNP799 58TcSNP899 59TcSNP226 60TcSNP1439
61TcSNP1442 62TcSNP193 63TcSNP25 64TcSNP364 65TcSNP144
66TcSNP230 67TcSNP560 68TcSNP723 69TcSNP731 70TcSNP701
71TcSNP1041 72TcSNP917 73Tcm003s01336581 74Tcm003s07402719 75Tcm001s00947643
76Tcm006s26664133 77Tcm002s20575712 78TcSNP529 79TcSNP1458 80TcSNP60
81TcSNP430 82TcSNP823 83TcSNP619 84TcSNP994 85TcSNP1144
86TcSNP1156 87TcSNP469 88TcSNP999 89TcSNP242 90TcSNP1253
91TcSNP1414 92TcSNP154 93TcSNP240