SNP Profiles of ICS-95   View Data

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 Key

 1234567891011121314
_Input profile
AAAACTCCAGAGCTCCCTCTGGCTCCCC
1._GC-01-128-7-05
AAAACTCCAGAGCTCCCTCTGGCTCCCC
2._GC-03-040-4-04
AAAACTCCAGAGCTCCCTCTGGCTCCCC
3._GC-03-040-4-04
AAAACTCCAGAGCTCCCTCTGGCTCCCC
4._GC-03-040-4-04
AAAACTCCAGAGCTCCCTCTGGCTCCCC
5._GC-03-040-4-04
AAAACTCCAGAGCTCCCTCTGGCTCCCC
6._GC-03-040-4-04
AAAACTCCAGAGCTCCCTCTGGCTCCCC
7._GC-01-128-7-05
AAAACTCCAGAGCTCCCTCTGGCTCCCC
8._GC-01-128-7-05
AAAACTCCAGAGCTCCCTCTGGCTCCCC
9._GC-01-128-7-05
AAAACTCCAGAGCTCCCTCTGGCTCCCC
10._GC-02-002-1-02
AAAACTCCAGAGCTCCCTCTGGCTCCCC
11._GC-03-039-4-03
AAAACTCCAGAGCTCCCTCTGGCTCCCC
12._GC-03-039-4-03
AAAACTCCAGAGCTCCCTCTGGCTCCCC
13._GC-03-040-4-04
AAAACTCCAGAGCTCCCTCTGGCTCCCC
14._GC-01-128-7-05
AAAACTCCAGAGCTCCCTCTGGCT__CC
15._GC-01-128-7-05
AAAACTCCAGAGCTCCCTCTGGCTCCCC
16._GC-02-002-1-02
AAAACTCCAGAGCTCCCTCTGGCTCC__
17._GC-03-039-4-03
AAAACTCCAGAGCTCCCTCTGGCTCCCC
18._GC-03-039-4-03
AAAACTCCAGAGCTCCCTCTGGCTCCCC
19._GC-03-039-4-03
AAAACTCCAGAGCTCCCTCTGGCTCCCC
20._GC-03-040-4-04
AA__CTCCAGAGCTCCCTCTGGCTCCCC
21._GC-03-039-4-03
AAAACTCCAGAGCTCCCTCTGGCTCCCC
22._GC-02-2-1-02
AAAACTCCAGAGCTCCCTCTGGCTCCCC
23._ICS_95
AAAACTCC________CTCTGG__CC__
24._ICS_95
AAAACTCC________CTCTGG__CC__
25._ICS_95
AAAACTCC________CTCTGG__CC__
26._ICS_95
AAAACTCC________CTCTGG__CC__
27._ICS_95
AAAACTCC________CTCTGG__CC__
28._ICS_95
AAAACTCC________CTCTGG__CC__
29._ICS_95
AAAACTCC________CTCTGG__CC__
30._ICS_95
AAAACTCC________CTCTGG__CC__
31._ICS_95
AAAACTCC________CTCTGG__CC__
32._ICS_95
AAAACTCC________CTCTGG__CC__
33._ICS_95
AAAACTCC________CTCTGG__CC__
34._ICS_95
AAAACTCC________CTCTGG__CC__
35._ICS_95
AAAACTCC________CTCTGG__CC__
36._ICS_95
AAAACTCC________CTCTGG__CC__
37._ICS_95
AAAACTCC________CTCTGG__CC__
38._ICS_95
AAAACTCC________CTCTGG__CC__
39._ICS_95
AAAACTCC________CTCTGG__CC__
40._ICS_95
AAAACTCC________CTCTGG__CC__
41._ICS_95
AAAACTCC________CTCTGG______
42._ICS_95
AAAACTCC________CTCTGG__CC__
43._ICS_95
AA__CTCC________CTCTGG__CC__
44._ICS_95
AAAACTCC________CTCTGG__CC__
45._ICS_95
AAAACTCC________CTCTGG__CC__
46._RUQ_1144
AAAACTCC________CTCTGG__CC__
47._ICS_95
AAAACTCC________CTCTGG__CC__
48._ICS_95
AAAACTCC________CTCTGG__CC__
49._ICS_95
AAAACTCC__________CTGG__CC__
50._ICS_95
AAAACTCC________CTCTGG__CC__
51._ICS_95
AAAACTCC________CTCTGG__CC__
52._ICS_95
AAAACTCC________CTCTGG__CC__
53._GC-02-2-1-02
AAAACTCCAGAGCTCCCTCTGGCTCCCC
54._GC-02-2-1-02
AAAACTCCAGAGCTCCCTCTGGCTCCCC
55._GC-02-2-1-02
AAAACTCCAGAGCTCC__CTGGCTCCCC
56._ICS_95
AAAACTCC________CTCTGG__CC__
57._RUQ_1144
____CTCC____CC__CT____CTCC__
58._RUQ_1144
______CC________CT______CC__
59._RUQ_1144B
______CC____CC______________
60._RUQ_1144
______CC____CC______________
61._GC-02-002-1-2
AAAA__CCAGAG__GGAG__GGAGGGGG
62._RUQ_1144
AAAA__CCAGAG__GGAG__GGAGGGGG
63._MITC-000342
AAAA__CCAGAG__GGAG__GGAGGGGG
64._ICS_95_Fld#_13_Plt#_1
AAAA__CCAGAG__GGAG__GGAGGGGG
 1516171819202122232425262728
_Input profile
ATCCAAAAGGCGGGCTAGTTAGATATCG
1._GC-01-128-7-05
ATCCAAAAGGCGGGCTAGTTAGATATCG
2._GC-03-040-4-04
ATCCAAAAGGCGGGCTAGTTAGATATCG
3._GC-03-040-4-04
ATCCAAAAGGCGGGCTAGTTAGATATCG
4._GC-03-040-4-04
ATCCAAAAGGCGGGCTAGTTAGATATCG
5._GC-03-040-4-04
ATCCAAAAGGCGGGCTAGTTAGATATCG
6._GC-03-040-4-04
ATCCAAAAGGCGGGCTAGTTAGATATCG
7._GC-01-128-7-05
ATCCAAAAGGCGGGCTAGTTAGATATCG
8._GC-01-128-7-05
ATCCAAAAGGCGGGCTAGTTAGATATCG
9._GC-01-128-7-05
ATCCAAAAGGCGGGCTAGTTAGATATCG
10._GC-02-002-1-02
ATCCAAAAGGCGGGCTAGTTAGATATCG
11._GC-03-039-4-03
ATCCAAAAGGCGGGCTAGTTAGATATCG
12._GC-03-039-4-03
ATCCAAAAGGCGGGCTAGTTAGATATCG
13._GC-03-040-4-04
ATCCAAAAGGCGGGCTAGTTAGATATCG
14._GC-01-128-7-05
ATCCAAAAGGCGGGCTAGTTAGATATCG
15._GC-01-128-7-05
ATCCAAAAGGCGGGCTAGTTAGATATCG
16._GC-02-002-1-02
ATCCAAAAGGCGGGCTAGTTAGATATCG
17._GC-03-039-4-03
ATCCAAAAGGCGGGCTAGTTAGATATCG
18._GC-03-039-4-03
ATCCAAAAGGCGGGCTAGTTAGATATCG
19._GC-03-039-4-03
ATCCAAAAGGCGGGCTAGTTAGATATCG
20._GC-03-040-4-04
ATCCAAAAGGCGGGCTAGTTAGATATCG
21._GC-03-039-4-03
ATCCAAAAGGCGGGCTAGTTAGATATCG
22._GC-02-2-1-02
ATCCAAAAGGCGGGCTAGTTAGATATCG
23._ICS_95
______AA____GG________ATAT__
24._ICS_95
______AA____GG________ATAT__
25._ICS_95
______AA____GG________ATAT__
26._ICS_95
______AA____GG________ATAT__
27._ICS_95
______AA____GG________ATAT__
28._ICS_95
______AA____GG________ATAT__
29._ICS_95
______AA____GG________ATAT__
30._ICS_95
______AA____GG________ATAT__
31._ICS_95
______AA____GG________ATAT__
32._ICS_95
______AA____GG________ATAT__
33._ICS_95
______AA____GG________ATAT__
34._ICS_95
______AA____GG________ATAT__
35._ICS_95
______AA____GG________ATAT__
36._ICS_95
______AA____GG________ATAT__
37._ICS_95
______AA____GG________ATAT__
38._ICS_95
______AA____GG________ATAT__
39._ICS_95
______AA____GG________ATAT__
40._ICS_95
______AA____GG________ATAT__
41._ICS_95
______AA____GG________ATAT__
42._ICS_95
______AA____GG________ATAT__
43._ICS_95
______AA____GG________ATAT__
44._ICS_95
______AA____GG________ATAT__
45._ICS_95
______AA____GG________ATAT__
46._RUQ_1144
______AA____GG________ATAT__
47._ICS_95
______AA____GG________ATAT__
48._ICS_95
______AA____GG________ATAT__
49._ICS_95
______AA____GG________ATAT__
50._ICS_95
______AA____GG________ATAT__
51._ICS_95
______AA____GG________ATAT__
52._ICS_95
______AA____GG________ATAT__
53._GC-02-2-1-02
ATCCAAAAGGCGGGCTAGTTAGATATCG
54._GC-02-2-1-02
ATCCAAAAGGCGGGCTAGTTAGATATCG
55._GC-02-2-1-02
ATCCAAAAGGCGGGCTAGTTAGATATCG
56._ICS_95
______AA____GG________ATAT__
57._RUQ_1144
__________CG________AG__ATCG
58._RUQ_1144
____AG____CG__CT____AG__ATCG
59._RUQ_1144B
______AATT__________________
60._RUQ_1144
______AATT__________________
61._GC-02-002-1-2
ATCCAGAACC__GGAGAAAAAGATATCG
62._RUQ_1144
ATCCAGAACC__GGAGAAAAAGATATCG
63._MITC-000342
ATCCAGAACC__GGAGAAAAAGATATCG
64._ICS_95_Fld#_13_Plt#_1
ATCCAGAACC__GGAGAAAAAGATATCG
 2930313233343536373839404142
_Input profile
CGAACTGTGGCCACAAGTGGGTAGCTAA
1._GC-01-128-7-05
CGAACTGTGGCCACAAGTGGGTAGCTAA
2._GC-03-040-4-04
CGAACTGTGGCCACAAGTGGGTAGCTAA
3._GC-03-040-4-04
CGAACTGTGGCCACAAGTGGGTAGCTAA
4._GC-03-040-4-04
CGAACTGTGGCCACAAGTGGGTAGCTAA
5._GC-03-040-4-04
CGAACTGTGGCCACAAGTGGGTAGCTAA
6._GC-03-040-4-04
CGAACTGTGGCCACAAGTGGGTAGCTAA
7._GC-01-128-7-05
CGAACTGTGGCCACAAGTGGGTAGCTAA
8._GC-01-128-7-05
CGAACTGTGGCCACAAGTGGGTAGCTAA
9._GC-01-128-7-05
CGAACTGTGGCCACAAGTGGGTAGCTAA
10._GC-02-002-1-02
CGAACTGTGGCCACAAGTGGGTAGCTAA
11._GC-03-039-4-03
CGAACTGTGGCCACAAGTGGGTAGCTAA
12._GC-03-039-4-03
CGAACTGTGGCCACAAGTGGGTAGCTAA
13._GC-03-040-4-04
CGAACTGTGGCCACAAGTGGGTAGCTAA
14._GC-01-128-7-05
CGAACTGTGGCCACAAGTGGGTAGCTAA
15._GC-01-128-7-05
CGAACTGTGGCCACAAGTGGGTAGCTAA
16._GC-02-002-1-02
CGAACTGTGGCCACAAGTGGGTAGCTAA
17._GC-03-039-4-03
CGAACTGTGGCCACAAGTGGGTAGCTAA
18._GC-03-039-4-03
CG__CTGTGGCCACAAGTGGGTAGCTAA
19._GC-03-039-4-03
CGAACTGTGGCCACAAGTGGGTAGCTAA
20._GC-03-040-4-04
CGAACTGTGGCCACAAGTGGGTAGCTAA
21._GC-03-039-4-03
CGAACTGTGGCCACAAGTGGGTAGCTAA
22._GC-02-2-1-02
CGAACTGTGGCCACAAGTGGGTAGCTAA
23._ICS_95
CGAA______CC__AAGT____AG____
24._ICS_95
CGAA______CC__AAGT____AG____
25._ICS_95
CGAA______CC__AAGT____AG____
26._ICS_95
CGAA______CC__AAGT____AG____
27._ICS_95
CGAA______CC__AAGT____AG____
28._ICS_95
CGAA______CC__AAGT____AG____
29._ICS_95
CGAA______CC__AAGT____AG____
30._ICS_95
CGAA______CC__AAGT____AG____
31._ICS_95
CGAA______CC__AAGT____AG____
32._ICS_95
CGAA______CC__AAGT____AG____
33._ICS_95
CGAA______CC__AAGT____AG____
34._ICS_95
CGAA______CC__AAGT____AG____
35._ICS_95
CGAA______CC__AAGT____AG____
36._ICS_95
CGAA______CC__AAGT____AG____
37._ICS_95
CGAA______CC__AAGT____AG____
38._ICS_95
CGAA______CC__AAGT____AG____
39._ICS_95
CGAA______CC__AAGT____AG____
40._ICS_95
CGAA______CC__AAGT____AG____
41._ICS_95
CGAA______CC__AAGT____AG____
42._ICS_95
CGAA______CC__AAGT____AG____
43._ICS_95
CGAA______CC__AAGT____AG____
44._ICS_95
CG________CC__AAGT____AG____
45._ICS_95
CGAA______CC__AAGT____AG____
46._RUQ_1144
CGAA______CC__AAGT____AG____
47._ICS_95
CGAA______CC__AAGT____AG____
48._ICS_95
CG________CC__AAGT____AG____
49._ICS_95
CGAA______CC__AAGT____AG____
50._ICS_95
CGAA______CC__AAGT____AG____
51._ICS_95
CGAA______CC__AAGT____AG____
52._ICS_95
CGAA______CC__AAGT____AG____
53._GC-02-2-1-02
CGAACTGTGGCCACAAGTGGGTAGCTAA
54._GC-02-2-1-02
CG__CTGTGGCCACAAGTGGGTAGCTAA
55._GC-02-2-1-02
CGAACTGTGGCCACAAGTGGGTAGCTAA
56._ICS_95
CGAA______CC__AAGT____AG____
57._RUQ_1144
CG______GGCCACAAGT____AGCT__
58._RUQ_1144
CG______GGCC________GT__CT__
59._RUQ_1144B
CG________CC____________CT__
60._RUQ_1144
CG________CC__AA____________
61._GC-02-002-1-2
CGAAAGACGGCCACAAACCCACAGAGAA
62._RUQ_1144
CGAAAGACGGCCACAAACCCACAGAGAA
63._MITC-000342
CGAAAGACGGCCACAAACCCACAGAGAA
64._ICS_95_Fld#_13_Plt#_1
CGAAAGACGGCCACAAACCCACAGAGAA
 4344454647484950515253545556
_Input profile
CCGTATCCAGAGAGCTCCGGGGGTTTCT
1._GC-01-128-7-05
CCGTATCCAGAGAGCTCCGGGGGTTTCT
2._GC-03-040-4-04
CCGTATCCAGAGAGCTCCGGGGGTTTCT
3._GC-03-040-4-04
CCGTATCCAGAGAGCTCCGGGGGTTTCT
4._GC-03-040-4-04
CCGTATCCAGAGAGCTCCGGGGGTTTCT
5._GC-03-040-4-04
CCGTATCCAGAGAGCTCCGGGGGTTTCT
6._GC-03-040-4-04
CCGTATCCAGAGAGCTCCGGGGGTTTCT
7._GC-01-128-7-05
CCGTATCCAGAGAGCTCCGGGGGTTTCT
8._GC-01-128-7-05
CCGTATCCAGAGAGCTCCGGGGGTTTCT
9._GC-01-128-7-05
CCGTATCCAGAGAGCTCCGGGGGTTTCT
10._GC-02-002-1-02
CCGTATCCAGAGAGCTCCGGGGGTTTCT
11._GC-03-039-4-03
CCGTATCCAGAGAGCTCCGGGGGTTTCT
12._GC-03-039-4-03
CCGTATCCAGAGAGCTCCGGGGGTTTCT
13._GC-03-040-4-04
CCGTATCCAGAGAGCTCCGGGGGTTTCT
14._GC-01-128-7-05
CCGTATCCAGAGAGCTCCGGGGGTTTCT
15._GC-01-128-7-05
CCGTATCCAGAGAGCTCCGGGGGTTTCT
16._GC-02-002-1-02
CCGTATCCAGAGAGCTCCGGGGGTTTCT
17._GC-03-039-4-03
CCGTATCCAGAGAGCTCCGGGGGTTTCT
18._GC-03-039-4-03
CCGTATCCAGAGAGCTCCGGGGGTTTCT
19._GC-03-039-4-03
CCGTATCCAGAGAGCTCCGGGGGTTTCT
20._GC-03-040-4-04
CCGTATCCAGAGAGCTCCGGGGGTTTCT
21._GC-03-039-4-03
CCGTATCCAGAGAGCTCCGGGGGTTTCT
22._GC-02-2-1-02
CCGTATCCAG__AGCTCCGGGGGTTTCT
23._ICS_95
______CC__________________CT
24._ICS_95
______CC__________________CT
25._ICS_95
______CC__________________CT
26._ICS_95
______CC__________________CT
27._ICS_95
______CC__________________CT
28._ICS_95
______CC__________________CT
29._ICS_95
______CC__________________CT
30._ICS_95
______CC__________________CT
31._ICS_95
______CC__________________CT
32._ICS_95
______CC__________________CT
33._ICS_95
______CC__________________CT
34._ICS_95
______CC__________________CT
35._ICS_95
______CC__________________CT
36._ICS_95
______CC__________________CT
37._ICS_95
______CC__________________CT
38._ICS_95
______CC__________________CT
39._ICS_95
______CC__________________CT
40._ICS_95
______CC__________________CT
41._ICS_95
______CC__________________CT
42._ICS_95
______CC__________________CT
43._ICS_95
______CC__________________CT
44._ICS_95
______CC__________________CT
45._ICS_95
______CC__________________CT
46._RUQ_1144
______CC__________________CT
47._ICS_95
______CC__________________CT
48._ICS_95
______CC__________________CT
49._ICS_95
______CC__________________CT
50._ICS_95
______CC__________________CT
51._ICS_95
______CC__________________CT
52._ICS_95
______CC__________________CT
53._GC-02-2-1-02
CCGTATCCAGAGAGCTCCGGGGGTTTCT
54._GC-02-2-1-02
CCGTATCCAGAGAGCTCCGGGGGTTTCT
55._GC-02-2-1-02
CCGTATCCAGAGAGCTCCGGGGGTTTCT
56._ICS_95
______CC__________________CT
57._RUQ_1144
__GTAT____AG____________CTCT
58._RUQ_1144
____AT__AG________________CT
59._RUQ_1144B
__________AG________________
60._RUQ_1144
____________________________
61._GC-02-002-1-2
GGAC__GG__AGAGAG__GGGGACAGAG
62._RUQ_1144
GGAC__GG__AGAGAG__GGGGACAGAG
63._MITC-000342
GGAC__GG__AGAGAG__GGGGACAGAG
64._ICS_95_Fld#_13_Plt#_1
GGAC__GG__AGAGAG__GGGGACAGAG
 5758596061626364656667686970
_Input profile
CTGTAGCGCTTTACGGAAACGGGTTTAG
1._GC-01-128-7-05
CTGTAGCGCTTTACGGAAACGGGTTTAG
2._GC-03-040-4-04
CTGTAGCGCTTTACGGAAACGGGTTTAG
3._GC-03-040-4-04
CTGTAGCGCTTTACGGAAACGGGTTTAG
4._GC-03-040-4-04
CTGTAGCGCTTTACGGAAACGGGTTTAG
5._GC-03-040-4-04
CTGTAGCGCTTTACGGAAACGGGTTTAG
6._GC-03-040-4-04
CTGTAGCGCTTTACGGAAACGGGTTTAG
7._GC-01-128-7-05
CTGTAGCGCTTTACGGAAACGGGTTTAG
8._GC-01-128-7-05
CTGTAGCGCTTTACGGAAACGGGTTTAG
9._GC-01-128-7-05
CTGTAGCGCTTTACGGAAACGGGTTTAG
10._GC-02-002-1-02
CTGTAGCGCTTTACGGAAACGGGTTTAG
11._GC-03-039-4-03
CTGTAGCGCTTTACGGAAACGGGTTTAG
12._GC-03-039-4-03
CTGTAGCGCTTTACGGAAACGGGTTTAG
13._GC-03-040-4-04
CTGTAGCGCTTTACGGAAACGGGTTTAG
14._GC-01-128-7-05
CTGTAGCGCTTTACGGAAACGGGTTTAG
15._GC-01-128-7-05
CTGTAGCGCTTTACGGAAACGGGTTTAG
16._GC-02-002-1-02
CTGTAGCGCTTTACGGAAACGGGTTTAG
17._GC-03-039-4-03
CTGTAGCGCTTTACGGAAACGGGTTTAG
18._GC-03-039-4-03
CTGTAGCGCTTTACGGAAACGGGTTTAG
19._GC-03-039-4-03
CTGTAGCGCTTTACGGAAACGGGTTTAG
20._GC-03-040-4-04
CTGTAGCGCTTTACGGAAACGGGTTTAG
21._GC-03-039-4-03
CTGTAGCGCTTTACGGAAAC__GT__AG
22._GC-02-2-1-02
CTGTAGCGCTTTACGGAAACGGGTTTAG
23._ICS_95
CT____CG__TTACGG__ACGGGTTT__
24._ICS_95
CT____CG__TTACGG__ACGGGTTT__
25._ICS_95
CT____CG__TTACGG__ACGGGTTT__
26._ICS_95
CT____CG__TTACGG__ACGGGTTT__
27._ICS_95
CT____CG__TTACGG__ACGGGTTT__
28._ICS_95
CT____CG__TTACGG__ACGGGTTT__
29._ICS_95
CT____CG__TTACGG__ACGGGTTT__
30._ICS_95
CT____CG__TTACGG__ACGGGTTT__
31._ICS_95
CT____CG__TTACGG__ACGGGTTT__
32._ICS_95
CT____CG__TTACGG__ACGGGTTT__
33._ICS_95
CT____CG__TTACGG__ACGGGTTT__
34._ICS_95
CT____CG__TTACGG__ACGGGTTT__
35._ICS_95
CT____CG__TTACGG__ACGGGTTT__
36._ICS_95
CT____CG__TTACGG__ACGGGTTT__
37._ICS_95
CT____CG__TTACGG__ACGGGTTT__
38._ICS_95
CT____CG__TTACGG__ACGGGTTT__
39._ICS_95
CT____CG__TTACGG__ACGGGTTT__
40._ICS_95
CT____CG__TTACGG__ACGGGTTT__
41._ICS_95
CT____CG__TTACGG__ACGGGTTT__
42._ICS_95
CT____CG__TTACGG__ACGGGTTT__
43._ICS_95
CT____CG__TTACGG__ACGGGTTT__
44._ICS_95
CT____CG__TTACGG__ACGGGTTT__
45._ICS_95
CT____CG__TTACGG__ACGGGTTT__
46._RUQ_1144
CT____CG__TTACGG__ACGGGTTT__
47._ICS_95
CT____CG__TTACGG__AC__GT____
48._ICS_95
CT____CG__TTACGG__ACGGGTTT__
49._ICS_95
______CG__TTACGG__ACGGGTTT__
50._ICS_95
CT____CG__TTACGG__ACGGGTTT__
51._ICS_95
CT____CG__TTACGG__ACGGGTTT__
52._ICS_95
CT____CG__TTACGG__ACGGGTTT__
53._GC-02-2-1-02
CTGTAGCGCTTTACGGAAACGGGTTTAG
54._GC-02-2-1-02
CTGTAGCGCTTTACGGAAACGGGTTTAG
55._GC-02-2-1-02
__GTAGCGCTTTACGGAAACGGGTTTAG
56._ICS_95
CT____GG__TTACGG__ACGGGTTT__
57._RUQ_1144
__GTGGCGCTTTAC__AAACGGGTTTAG
58._RUQ_1144
______CGCT__AC__AAACGG______
59._RUQ_1144B
____AG____________ACGG__TTAG
60._RUQ_1144
____AG____________ACGG__TTAG
61._GC-02-002-1-2
AGACAGCGAGAAACGGAAACGGACAAAG
62._RUQ_1144
AGACAGCGAGAAACGGAAACGGACAAAG
63._MITC-000342
AGACAGCGAGAAACGGAAACGGACAAAG
64._ICS_95_Fld#_13_Plt#_1
AGACAGCGAGAAACGGAAACGGACAAAG
 7172737475767778798081828384
_Input profile
CCCCTTACAGACAAAGCCCGCTAAACCT
1._GC-01-128-7-05
CCCCTTACAGACAAAGCCCGCTAAACCT
2._GC-03-040-4-04
CCCCTTACAGACAAAGCCCGCTAAACCT
3._GC-03-040-4-04
CCCCTTACAGACAAAGCCCGCTAAACCT
4._GC-03-040-4-04
CCCCTTACAGACAAAGCCCGCTAAACCT
5._GC-03-040-4-04
CCCCTTACAGACAAAGCCCGCTAAACCT
6._GC-03-040-4-04
CCCCTTACAGACAAAGCCCGCTAAACCT
7._GC-01-128-7-05
CCCCTTACAGACAAAGCCCGCTAAACCT
8._GC-01-128-7-05
CCCCTTACAGACAAAGCCCGCTAAACCT
9._GC-01-128-7-05
CCCCTTACAGACAAAGCCCGCTAAACCT
10._GC-02-002-1-02
CCCCTTACAGACAAAGCCCGCTAAACCT
11._GC-03-039-4-03
CCCCTTACAGACAAAGCCCGCTAAACCT
12._GC-03-039-4-03
CCCCTTACAGACAAAGCCCGCTAAACCT
13._GC-03-040-4-04
CCCCTTACAGACAAAGCCCGCTAAACCT
14._GC-01-128-7-05
CCCCTTACAGACAAAGCCCGCTAAACCT
15._GC-01-128-7-05
CCCCTTACAGACAAAGCCCGCTAA__CT
16._GC-02-002-1-02
CCCCTTACAGACAAAGCCCGCTAAACCT
17._GC-03-039-4-03
CCCCTTACAGACAAAGCCCGCTAAACCT
18._GC-03-039-4-03
CCCCTTACAGACAAAGCCCGCTAAACCT
19._GC-03-039-4-03
CCCCTTACAGACAAAGCCCGCTAAACCT
20._GC-03-040-4-04
CCCCTTACAGACAAAGCCCGCTAAACCT
21._GC-03-039-4-03
CC__TTACAGACAAAGCCCGCTAAACCT
22._GC-02-2-1-02
CCCCTTACAGACAAAGCCCGCTAAACCT
23._ICS_95
____TT__________CCCG______CT
24._ICS_95
____TT__________CCCG______CT
25._ICS_95
____TT__________CCCG______CT
26._ICS_95
____TT__________CCCG______CT
27._ICS_95
____TT__________CCCG______CT
28._ICS_95
____TT__________CCCG______CT
29._ICS_95
____TT__________CCCG______CT
30._ICS_95
____TT__________CCCG______CT
31._ICS_95
____TT__________CCCG______CT
32._ICS_95
____TT__________CCCG______CT
33._ICS_95
____TT__________CCCG______CT
34._ICS_95
____TT__________CCCG______CT
35._ICS_95
____TT__________CCCG______CT
36._ICS_95
____TT__________CCCG______CT
37._ICS_95
____TT__________CCCG______CT
38._ICS_95
____TT__________CCCG______CT
39._ICS_95
____TT__________CCCG______CT
40._ICS_95
____TT__________CCCG______CT
41._ICS_95
____TT__________CCCG______CT
42._ICS_95
____TT__________CCCG______CT
43._ICS_95
____TT__________CCCG______CT
44._ICS_95
____TT__________CCCG______CT
45._ICS_95
____TT__________CCCG______CT
46._RUQ_1144
____TT__________CC________CT
47._ICS_95
____TT__________CCCG______CT
48._ICS_95
____TT__________CCCG______CT
49._ICS_95
____TT__________CCCG______CT
50._ICS_95
____TT__________CCGG______CT
51._ICS_95
____TT__________CCGG______CT
52._ICS_95
____TT__________CCGG______CT
53._GC-02-2-1-02
CCCCTTACAGACAAAGCCCGCTAAACCT
54._GC-02-2-1-02
CCCCTTACAGACAAAGCCCGCTAAACCT
55._GC-02-2-1-02
CCCCTTACAGACAAAGCCCGCTAAACCT
56._ICS_95
____TT__________CCGG______CT
57._RUQ_1144
________________CCCG____ACCT
58._RUQ_1144
__CC______________CC________
59._RUQ_1144B
________________ACCG____AC__
60._RUQ_1144
________________ACCG____AC__
61._GC-02-002-1-2
____AAACAGACAA__CCCCAGAAACAG
62._RUQ_1144
____AAACAGACAA__CCCCAGAAACAG
63._MITC-000342
____AAACAGACAA__CCCCAGAAACAG
64._ICS_95_Fld#_13_Plt#_1
____AAACAGACAA__CCCCAGAAACAG
 85868788899091929394    
_Input profile
CTCTTTAGCTCTGTTTATGGX_XX_XX_XX_X
1._GC-01-128-7-05
CTCTTTAGCTCTGTTTATGGX_XX_XX_XX_X
2._GC-03-040-4-04
CTCTTTAGCTCTGTTTATGGX_XX_XX_XX_X
3._GC-03-040-4-04
CTCTTTAGCTCTGTTTATGGX_XX_XX_XX_X
4._GC-03-040-4-04
CTCTTTAGCTCTGTTTATGGX_XX_XX_XX_X
5._GC-03-040-4-04
CTCTTTAGCTCTGTTTATGGX_XX_XX_XX_X
6._GC-03-040-4-04
CTCTTTAGCTCTGTTTATGGX_XX_XX_XX_X
7._GC-01-128-7-05
CTCTTTAGCTCTGTTTATGGX_XX_XX_XX_X
8._GC-01-128-7-05
CTCTTTAGCTCTGTTTATGGX_XX_XX_XX_X
9._GC-01-128-7-05
CTCTTTAGCTCTGTTTATGGX_XX_XX_XX_X
10._GC-02-002-1-02
CTCTTTAGCTCTGTTTATGGX_XX_XX_XX_X
11._GC-03-039-4-03
CTCTTTAGCTCTGTTTATGGX_XX_XX_XX_X
12._GC-03-039-4-03
CTCTTTAGCTCTGTTTATGGX_XX_XX_XX_X
13._GC-03-040-4-04
CTCTTTAGCTCTGTTTATGGX_XX_XX_XX_X
14._GC-01-128-7-05
CTCTTTAGCTCTGTTTATGGX_XX_XX_XX_X
15._GC-01-128-7-05
CTCTTTAGCTCTGTTTATGGX_XX_XX_XX_X
16._GC-02-002-1-02
CTCTTTAGCTCTGTTTATGGX_XX_XX_XX_X
17._GC-03-039-4-03
CTCTTTAGCTCT__TTATGGX_XX_XX_XX_X
18._GC-03-039-4-03
CTCTTTAGCTCTGTTTATGGX_XX_XX_XX_X
19._GC-03-039-4-03
CTCT__AGCTCTGTTTATGGX_XX_XX_XX_X
20._GC-03-040-4-04
CTCTTTAGCTCTGTTTATGGX_XX_XX_XX_X
21._GC-03-039-4-03
CTCTTTAGCTCTGTTTATGGX_XX_XX_XX_X
22._GC-02-2-1-02
__CTTTAGCTCTGTTT____X_XX_XX_XX_X
23._ICS_95
CTCT__AG__CTGTTT____X_XX_XX_XX_X
24._ICS_95
CTCT__AG__CTGTTT____X_XX_XX_XX_X
25._ICS_95
CTCT__AG__CTGTTT____X_XX_XX_XX_X
26._ICS_95
CTCT__AG__CTGTTT____X_XX_XX_XX_X
27._ICS_95
CTCT__AG__CTGTTT____X_XX_XX_XX_X
28._ICS_95
CTCT__AG__CTGTTT____X_XX_XX_XX_X
29._ICS_95
CTCT__AG__CTGTTT____X_XX_XX_XX_X
30._ICS_95
CTCT__AG__CTGTTT____X_XX_XX_XX_X
31._ICS_95
CTCT__AG__CTGTTT____X_XX_XX_XX_X
32._ICS_95
CTCT__AG__CTGTTT____X_XX_XX_XX_X
33._ICS_95
CTCT__AG__CTGTTT____X_XX_XX_XX_X
34._ICS_95
CTCT__AG__CTGTTT____X_XX_XX_XX_X
35._ICS_95
CTCT__AG__CTGTTT____X_XX_XX_XX_X
36._ICS_95
CTCT__AG__CTGTTT____X_XX_XX_XX_X
37._ICS_95
CTCT__AG__CTGTTT____X_XX_XX_XX_X
38._ICS_95
CTCT__AG__CTGTTT____X_XX_XX_XX_X
39._ICS_95
CTCT__AG__CTGTTT____X_XX_XX_XX_X
40._ICS_95
CTCT__AG__CTGTTT____X_XX_XX_XX_X
41._ICS_95
CTCT__AG__CTGTTT____X_XX_XX_XX_X
42._ICS_95
CTCT__AG__CT__TT____X_XX_XX_XX_X
43._ICS_95
CTCT__AG__CTGTTT____X_XX_XX_XX_X
44._ICS_95
CTCT__AG__CTGTTT____X_XX_XX_XX_X
45._ICS_95
__CT__AG__CTGTTT____X_XX_XX_XX_X
46._RUQ_1144
CTCT__AG__CTGTTT____X_XX_XX_XX_X
47._ICS_95
CTCT__AG__CTGTTT____X_XX_XX_XX_X
48._ICS_95
CTCT__AG__CT__TT____X_XX_XX_XX_X
49._ICS_95
__CT__AG__CT__TT____X_XX_XX_XX_X
50._ICS_95
CTCT__AG__CTGTTT____X_XX_XX_XX_X
51._ICS_95
CTCT__AG__CTGTTT____X_XX_XX_XX_X
52._ICS_95
CTCT__AG__CTGTTT____X_XX_XX_XX_X
53._GC-02-2-1-02
CTCTTTAGCTCTGTTTCCCCX_XX_XX_XX_X
54._GC-02-2-1-02
CTCTTTAGCTCT__TTCCCCX_XX_XX_XX_X
55._GC-02-2-1-02
__CTTTAGCTCT__TTCCCCX_XX_XX_XX_X
56._ICS_95
CTCT__AG__CTGTTT____X_XX_XX_XX_X
57._RUQ_1144
______AG__CTGT______X_XX_XX_XX_X
58._RUQ_1144
CT__________________X_XX_XX_XX_X
59._RUQ_1144B
__CT____CT__GT______X_XX_XX_XX_X
60._RUQ_1144
__CT____CT__GT______X_XX_XX_XX_X
61._GC-02-002-1-2
AG__AA____AGAAAAATGGX_XX_XX_XX_X
62._RUQ_1144
AG__AA____AGAAAAATGGX_XX_XX_XX_X
63._MITC-000342
AG__AA____AGAAAAATGGX_XX_XX_XX_X
64._ICS_95_Fld#_13_Plt#_1
AG__AA____AGAAAAATGGX_XX_XX_XX_X

Input profile: ICS_95 GC-03-039-4-03

 
Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

1._ICS_95 GC-01-128-7-05

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

2._ICS_95 GC-03-040-4-04

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

3._ICS_95 GC-03-040-4-04

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

4._ICS_95 GC-03-040-4-04

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

5._ICS_95 GC-03-040-4-04

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

6._ICS_95 GC-03-040-4-04

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

7._ICS_95 GC-01-128-7-05

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

8._ICS_95 GC-01-128-7-05

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

9._ICS_95 GC-01-128-7-05

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

10._ICS_95 GC-02-002-1-02

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 16
Notes: 16
 Mars, 2018

11._ICS_95 GC-03-039-4-03

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

12._ICS_95 GC-03-039-4-03

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

13._ICS_95 GC-03-040-4-04

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

14._ICS_95 GC-01-128-7-05

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

15._ICS_95 GC-01-128-7-05

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

16._ICS_95 GC-02-002-1-02

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

17._ICS_95 GC-03-039-4-03

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

18._ICS_95 GC-03-039-4-03

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

19._ICS_95 GC-03-039-4-03

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14
 Mars, 2018

20._ICS_95 GC-03-040-4-04

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 15
Notes: 15
 Mars, 2018

21._ICS_95 GC-03-039-4-03

identical
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

22._ICS_95 GC-02-2-1-02

identical
90 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 2, Block: 1, Rep: 2, Tree: PL13
Notes: PL13 FP13
 Mars, 2018

23._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1705 2
 Dapeng Zhang, 2016

24._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 13
 Dapeng Zhang, 2016

25._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 11
 Dapeng Zhang, 2016

26._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 9
 Dapeng Zhang, 2016

27._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 5
 Dapeng Zhang, 2016

28._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 3
 Dapeng Zhang, 2016

29._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 1
 Dapeng Zhang, 2016

30._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 14
 Dapeng Zhang, 2016

31._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 10
 Dapeng Zhang, 2016

32._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 5
 Dapeng Zhang, 2016

33._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 1
 Dapeng Zhang, 2016

34._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 2102 2 > FP
 Dapeng Zhang, 2016

35._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 2102 16
 Dapeng Zhang, 2016

36._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 2102 9
 Dapeng Zhang, 2016

37._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1705 6
 Dapeng Zhang, 2016

38._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1705 5
 Dapeng Zhang, 2016

39._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1705 4
 Dapeng Zhang, 2016

40._ICS_95

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1705 3
 Dapeng Zhang, 2016

41._ICS_95

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1705 1
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016

42._ICS_95

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 3
 Dapeng Zhang, 2016

43._ICS_95

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 15
 Dapeng Zhang, 2016

44._ICS_95

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 7
 Dapeng Zhang, 2016

45._ICS_95

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 2102 13 > F
 Dapeng Zhang, 2016

46._ICS_95 RUQ_1144

identical
38 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

47._ICS_95

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 12
 Dapeng Zhang, 2016

48._ICS_95

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 2102 3 > FP
 Dapeng Zhang, 2016

49._ICS_95

identical
35 shared markers

Mars Center for Cocoa Science, Brazil
Location: 2102 1 > FP
 Dapeng Zhang, 2016

50._ICS_95

98.7 %
39 shared markers

Estation Experimental Tropical Pichilingue, Ecuador
 Dapeng Zhang, 2016

51._ICS_95

98.7 %
39 shared markers

Cocoa Research Institute of Ghana (CRIG), Ghana
Location: P26 56
 Dapeng Zhang, 2016

52._ICS_95

98.7 %
39 shared markers

Malaysian Cocoa Board (MCB), Malaysia
Location: Row 10 C0204 2A
 Dapeng Zhang, 2016

53._ICS_95 GC-02-2-1-02

97.9 %
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 2, Block: 1, Rep: 2, Tree: PL2
Notes: PL2 FP2
 Mars, 2018

54._ICS_95 GC-02-2-1-02

97.8 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 2, Block: 1, Rep: 2, Tree: PL3
Notes: PL3 FP1
 Mars, 2018

55._ICS_95 GC-02-2-1-02

97.8 %
90 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 2, Block: 1, Rep: 2, Tree: PL1
Notes: PL1 FP4
 Mars, 2018

56._ICS_95

97.4 %
39 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: San Juan Block1
 Dapeng Zhang, 2016

57._ICS_95 RUQ_1144

96.4 %
42 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

58._ICS_95 RUQ_1144

96.2 %
26 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Location: GBR207
 Jocelyn De Wever et al., 2019

59._ICS_95 RUQ_1144B

89.5 %
19 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

60._ICS_95 RUQ_1144

88.9 %
18 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

61._ICS_95 GC-02-002-1-2

54.9 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 2, Block: 1, Rep: 2, Tree: 13 > FP3
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

62._ICS_95 RUQ_1144

54.9 %
81 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

63._ICS_95 MITC-000342

54.9 %
81 shared markers

USDA-SHRS, United States of America
 Mars, 2018

64._ICS_95 ICS_95_Fld#_13_Plt#_1

54.9 %
81 shared markers

USDA-TARS, United States of America
Location: Field: 13, Tree: 1
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP860 18TcSNP1062 19TcSNP836 20TcSNP878
21TcSNP929 22TcSNP413 23TcSNP653 24TcSNP1149 25TcSNP174
26TcSNP32 27TcSNP372 28TcSNP448 29TcSNP872 30TcSNP953
31TcSNP1034 32TcSNP1175 33TcSNP1111 34TcSNP577 35TcSNP90
36TcSNP998 37TcSNP150 38TcSNP28 39TcSNP751 40TcSNP1484
41TcSNP602 42TcSNP561 43TcSNP894 44TcSNP1063 45TcSNP1126
46TcSNP1270 47TcSNP606 48TcSNP329 49TcSNP689 50TcSNP944
51TcSNP1242 52TcSNP1383 53TcSNP547 54TcSNP776 55TcSNP1309
56TcSNP151 57TcSNP1520 58TcSNP799 59TcSNP899 60TcSNP226
61TcSNP1439 62TcSNP1442 63TcSNP193 64TcSNP25 65TcSNP364
66TcSNP144 67TcSNP230 68TcSNP560 69TcSNP723 70TcSNP731
71TcSNP701 72TcSNP1041 73TcSNP917 74Tcm003s01336581 75Tcm003s07402719
76Tcm001s00947643 77Tcm006s26664133 78Tcm002s20575712 79TcSNP529 80TcSNP1458
81TcSNP60 82TcSNP430 83TcSNP823 84TcSNP619 85TcSNP994
86TcSNP1144 87TcSNP1156 88TcSNP469 89TcSNP999 90TcSNP242
91TcSNP1253 92TcSNP1414 93TcSNP154 94TcSNP240