SNP Profiles of GU-353   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
AACCACGGGGCTCCCCCCGGTTCCTTAA
1._GC-04-023-2-05
AACCACGGGGCTCCCCCCGGTTCCTTAA
2._GC-04-023-2-05
AACCACGGGGCTCCCCCCGGTTCCTTAA
3._GC-04-023-2-05
AACCACGGGGCTCCCCCCGGTTCCTTAA
4._GC-04-023-2-05
AACCACGGGGCTCCCCCCGGTTCCTTAA
5._GC-04-023-2-05
AACCACGGGGCTCCCCCCGGTTCCTT__
6._GC-04-023-2-05
AACCACGGGGCTCCCCCCGGTTCCTTAA
7._GC-04-23-2-5
AA__ACGGGG__GGGG__GGAAGGAATT
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
CCGGGGCCGGTTAATTGGTTAACCGGAA
1._GC-04-023-2-05
CCGGGGCCGGTTAATTGGTTAACCGGAA
2._GC-04-023-2-05
CCGGGGCCGGTTAATTGGTTAACCGGAA
3._GC-04-023-2-05
CCGGGGCCGGTTAATTGGTTAACCGGAA
4._GC-04-023-2-05
CCGGGGCCGGTTAATTGGTTAACCGGAA
5._GC-04-023-2-05
CCGGGGCCGGTTAATTGGTTAACCGGAA
6._GC-04-023-2-05
CCGGGGCCGGTTAATTGGTTAACCGGAA
7._GC-04-23-2-5
CCGGCC__GGAAAGAAGGTTAAGGCCAA
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
TTTTGGCCCCTTGGGTGGCCGGCCGGTT
1._GC-04-023-2-05
TTTTGGCCCCTTGGGTGGCCGGCCGGTT
2._GC-04-023-2-05
TTTTGGCCCCTTGGGTGGCCGGCCGGTT
3._GC-04-023-2-05
TTTTGGCCCCTTGGGTGGCCGGCCGGTT
4._GC-04-023-2-05
TTTTGGCCCCTTGGGTGGCCGGCCGGTT
5._GC-04-023-2-05
TTTTGGCCCCTTGGGTGGCCGGCCGGTT
6._GC-04-023-2-05
TTTTGGCCCCTTGGGTGGCCGGCCGGTT
7._GC-04-23-2-5
AAAAGGCCCCAACCACGGGGGGGGCC__
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
TTAAGGAACCCCGGGGTTTTCCTTGGCC
1._GC-04-023-2-05
TTAAGGAACCCCGGGGTTTTCCTTGGCC
2._GC-04-023-2-05
TTAAGGAACCCCGGGGTTTTCCTTGGCC
3._GC-04-023-2-05
TTAAGGAACCCCGGGGTTTTCCTTGGCC
4._GC-04-023-2-05
TTAAGGAACCCCGGGGTTTTCCTTGGCC
5._GC-04-023-2-05
TTAAGGAACCCCGGGGTTTTCCTTGGCC
6._GC-04-023-2-05
TTAAGGAACCCCGGGGTTTTCCTTGGCC
7._GC-04-23-2-5
AA__GGAAGG__GGGGAAAAGGAAGGGG
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
CCCCAAGGGGAAGGGGGGAACCCCAGCC
1._GC-04-023-2-05
CCCCAAGGGGAAGGGGGGAACCCCAGCC
2._GC-04-023-2-05
CCCCAAGGGGAAGGGGGGAACCCCAGCC
3._GC-04-023-2-05
CCCCAAGGGGAAGGGGGGAACCCCAGCC
4._GC-04-023-2-05
CCCCAAGGGGAAGGGGGGAACCCCAGCC
5._GC-04-023-2-05
CCCCAAGGGGAAGGGGGGAACCCCAGCC
6._GC-04-023-2-05
CCCCAAGGGGACGGGGGGAACCCCAGCC
7._GC-04-23-2-5
GGGGAAGGGGAAGGCCCCAA______GG
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
_Input profile
AAAACCCCGGAAGGCCTTAACCCTCCCC
1._GC-04-023-2-05
AAAACCCCGGAAGGCCTTAACCCTCCCC
2._GC-04-023-2-05
AAAACCCCGGAAGGCCTTAACCCTCCCC
3._GC-04-023-2-05
AAAACCCCGGAAGGCCTTAACCCTCCCC
4._GC-04-023-2-05
AAAACCCCGGAAGGCCTTAACCCTCCCC
5._GC-04-023-2-05
AAAACCCCGGAAGGCCTTAACCCTCCCC
6._GC-04-023-2-05
AAAACCCCGGAAGGCCTTAACCCTCCCC
7._GC-04-23-2-5
AAAACCCC__AACCGGTTAAGGAG__GG
 85 86 87 88 89 90 91        
_Input profile
AGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_XX_X
1._GC-04-023-2-05
AGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_XX_X
2._GC-04-023-2-05
AGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_XX_X
3._GC-04-023-2-05
AGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_XX_X
4._GC-04-023-2-05
AGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_XX_X
5._GC-04-023-2-05
AGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_XX_X
6._GC-04-023-2-05
AGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_XX_X
7._GC-04-23-2-5
____GGAAAATTGGX_XX_XX_XX_XX_XX_XX_X

Input profile: GU_353 GC-04-023-2-05

 
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Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

1._GU_353 GC-04-023-2-05

identical
91 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

2._GU_353 GC-04-023-2-05

identical
91 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP4
 Mars, 2018

3._GU_353 GC-04-023-2-05

identical
91 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP2
 Mars, 2018

4._GU_353 GC-04-023-2-05

identical
91 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8 > FP3
 Mars, 2018

5._GU_353 GC-04-023-2-05

identical
90 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

6._GU_353 GC-04-023-2-05

99.5 %
91 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

7._GU_353 GC-04-23-2-5

47.4 %
77 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 4, Block: 2, Rep: 5, Tree: 4
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

 

  Key to SNP Markers

1TcSNP1075 2TcSNP534 3TcSNP591 4TcSNP42 5TcSNP418
6TcSNP702 7TcSNP1096 8TcSNP1060 9TcSNP1165 10TcSNP429
11TcSNP75 12TcSNP891 13TcSNP122 14TcSNP316 15TcSNP521
16TcSNP1062 17TcSNP836 18TcSNP878 19TcSNP929 20TcSNP413
21TcSNP653 22TcSNP1149 23TcSNP174 24TcSNP32 25TcSNP372
26TcSNP448 27TcSNP872 28TcSNP953 29TcSNP1034 30TcSNP1175
31TcSNP1111 32TcSNP577 33TcSNP90 34TcSNP150 35TcSNP28
36TcSNP751 37TcSNP1484 38TcSNP602 39TcSNP561 40TcSNP894
41TcSNP1063 42TcSNP1126 43TcSNP1270 44TcSNP606 45TcSNP329
46TcSNP689 47TcSNP944 48TcSNP1242 49TcSNP1383 50TcSNP547
51TcSNP776 52TcSNP151 53TcSNP1520 54TcSNP799 55TcSNP899
56TcSNP226 57TcSNP1439 58TcSNP1442 59TcSNP193 60TcSNP25
61TcSNP364 62TcSNP144 63TcSNP230 64TcSNP560 65TcSNP723
66TcSNP731 67TcSNP701 68TcSNP1041 69TcSNP645 70TcSNP917
71Tcm003s01336581 72Tcm003s07402719 73Tcm001s00947643 74Tcm006s26664133 75Tcm002s20575712
76TcSNP529 77TcSNP1458 78TcSNP60 79TcSNP430 80TcSNP823
81TcSNP619 82TcSNP994 83TcSNP1144 84TcSNP1156 85TcSNP469
86TcSNP999 87TcSNP242 88TcSNP1253 89TcSNP1414 90TcSNP154
91TcSNP240