SNP Profiles of UF 667   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
AAACCTCCGGAGCCCCCCCCGGTTCCTT
1._PA_137_[PER]___
AAACCTCCGGAGCCCCCCCCGGTTCCTT
2._PA_137_[PER]___
AAACCTCCGGAGCCCCCCCCGGTTCCTT
3._PA_137_[PER]___
AAACCTCCGGAGCCCCCCCCGGTTCCTT
4._PA_137_[PER]___
AAACCTCCGGAGCCCCCCCCGGTTCCTT
5._PA_137_[PER]___
AAACCTCCGGAGCCCCCCCCGGTTCCTT
6._PA_137_[PER]___
AAACCTCCGGAGCCCCCCCCGGTTCCTT
7._PA_137_[PER]___
AAACCTCCGGAGCCCCCCCCGGTTCCTT
8._PA_137_[PER]___
AAACCTCCGGAGCCCCCCCCGGTTCCTT
9._PA_137_[PER]___
AAACCTCCGGAGCCCCCCCCGG__CCTT
10._PA_137_[PER]___
AAACCTCC________CCCCGG__CC__
11._PA_137_[PER]___
AAACCTCC________CCCCGG__CC__
12._PA_137_[PER]___
AAACCTCC________CCCCGG__CC__
13._PA_137_[PER]___
AAACCTCC________CCCCGG__CC__
14._PA_137_[PER]___
AAACCTCC________CCCCGG__CC__
15._PA_137_[PER]___
AAACCTCC________CCCCGG__CC__
16._PA_137_[PER]___
AAACCTCC________CCCCGG__CC__
17._PA_137_[PER]___
AAACCTCC________CCCCGG__CC__
18._PA_137_[PER]___
AAACCTCC________CCCCGG__CC__
19._PA_137_[PER]___
AAACCTCC________CCCCGG__CC__
20._PA_137_[PER]___
____CTCC____CC__CC____TTCC__
21._PA_137_[PER]___
AAACCTCC________CCCCGG__CC__
22._PA_137_[PER]___
AAACCTCC________CCCCGG__CC__
23._PA_137_[PER]___
AAACCTCC________CCCCGG__CC__
24._PA_137_[PER]___
AAACCTCC________CCCCGG__CC__
25._PA_137_[PER]___
AAACCTCC________CCCCGG__CC__
26._PA_137_[PER]___
AAACCTCC________CCCCGG__CC__
27._PA_137_[PER]___
____CT__________________CC__
28._PA_137_[PER]___
AAACCTCC________CCCCGG__CC__
29._PA_137_[PER]___
______CC____CC______________
30._PA_137_[PER]___
______CC____CC______________
31._PA_137_[PER]___
AAACCT____________CCGG__CC__
32._PA_137_[PER]___
______CC________CC______CC__
33._PA_137_[PER]___
AAAC__CCGGAG__GGGG__GGAAGGAA
34._PA_137_[PER]___
AAAC__CCGGAG__GGGG__GGAAGGAA
35._PA_137_[PER]___
AAAC__CCGGAG__GGGG__GGAAGGAA
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
AAAAGGCGCCCGCCAATTGGATAACCGG
1._PA_137_[PER]___
AAAAGGCGCCCGCCAATTGGATAACCGG
2._PA_137_[PER]___
AAAAGGCGCCCGCCAATTGGATAACCGG
3._PA_137_[PER]___
AAAAGGCGCCCGCCAATTGGATAACCGG
4._PA_137_[PER]___
AAAAGGCGCCCGCCAATTGGATAACCGG
5._PA_137_[PER]___
AAAAGGCGCCCGCCAATTGGATAACCGG
6._PA_137_[PER]___
AAAAGGCGCCCGCCAATTGGATAACCGG
7._PA_137_[PER]___
AAAAGGCGCCCGCCAATTGGATAACCGG
8._PA_137_[PER]___
AAAAGGCGCCCGCCAATTGGATAACCGG
9._PA_137_[PER]___
AAAAGGCGCCCGCCAATTGGATAACCGG
10._PA_137_[PER]___
____GG____CG________ATAA__GG
11._PA_137_[PER]___
____GG____CG________ATAA__GG
12._PA_137_[PER]___
____GG____CG________ATAA__GG
13._PA_137_[PER]___
____GG____CG________ATAA__GG
14._PA_137_[PER]___
____GG____CG________ATAA__GG
15._PA_137_[PER]___
____GG____CG________ATAA__GG
16._PA_137_[PER]___
____GG____CG________ATAA__GG
17._PA_137_[PER]___
____GG____CG________ATAA__GG
18._PA_137_[PER]___
____GG____CG________ATAA__GG
19._PA_137_[PER]___
____GG____CG________ATAA__GG
20._PA_137_[PER]___
________CC________GG__AACCGG
21._PA_137_[PER]___
____GG____CG________ATAA__GG
22._PA_137_[PER]___
____GG____CG________ATAA__GG
23._PA_137_[PER]___
____GG____CG________ATAA__GG
24._PA_137_[PER]___
____GG____CG________ATAA__GG
25._PA_137_[PER]___
____GG____CG________ATAA__GG
26._PA_137_[PER]___
____GG____CG________ATAA__GG
27._PA_137_[PER]___
______________________AACC__
28._PA_137_[PER]___
____GGTTCCCG________ATAA__GG
29._PA_137_[PER]___
____GGTT__________________GG
30._PA_137_[PER]___
____GGTT__________________GG
31._PA_137_[PER]___
____GG____CG________ATAA____
32._PA_137_[PER]___
__AG____GG__CC____GG__AACCCC
33._PA_137_[PER]___
TTAGGGCG__CGGGAGAAGGATAAGGCC
34._PA_137_[PER]___
TTAGGGCG__CGGGAGAAGGATAAGGCC
35._PA_137_[PER]___
TTAGGGCG__CGGGAGAAGGATAAGGCC
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
AATTGTGGCGCCAGGTGGGTGGTTAGCC
1._PA_137_[PER]___
AATTGTGGCGCCAGGTGGGTGGTTAGCC
2._PA_137_[PER]___
AATTGTGGCGCCAGGTGGGTGGTTAGCC
3._PA_137_[PER]___
AATTGTGGCGCCAGGTGGGTGGTTAGCC
4._PA_137_[PER]___
AATTGTGGCGCCAGGTGGGTGGTTAGCC
5._PA_137_[PER]___
AATTGTGGCGCCAGGTGGGTGGTTAGCC
6._PA_137_[PER]___
AATTGTGGCGCCAGGTGGGTGGTTAGCC
7._PA_137_[PER]___
AATTGTGGCGCCAGGTGGGTGGTTAGCC
8._PA_137_[PER]___
AATTGTGGCGCCAGGTGGGTGGTTAGCC
9._PA_137_[PER]___
AATTGTGGCGCCAGGTGGGTGGTTAGCC
10._PA_137_[PER]___
AA______CG__AGGT____GG______
11._PA_137_[PER]___
AA______CG__AGGT____GG______
12._PA_137_[PER]___
AA______CG__AGGT____GG______
13._PA_137_[PER]___
AA______CG__AGGT____GG______
14._PA_137_[PER]___
AA______CG__AGGT____GG______
15._PA_137_[PER]___
AA______CG__AGGT____GG______
16._PA_137_[PER]___
AA______CG__AGGT____GG______
17._PA_137_[PER]___
AA______CG__AGGT____GG______
18._PA_137_[PER]___
AA______CG__AGGT____GG______
19._PA_137_[PER]___
AA______CG__AGGT____GG______
20._PA_137_[PER]___
______GGCGCCAGGT____GGTT____
21._PA_137_[PER]___
AA______CG__AGGT____GG______
22._PA_137_[PER]___
AA______CG__AGGT____GG______
23._PA_137_[PER]___
AA______CG__AGGT____GG______
24._PA_137_[PER]___
AA______CG__AGGT____GG______
25._PA_137_[PER]___
AA______CG__AGGT____GG______
26._PA_137_[PER]___
AA______CG__AGGT____GG______
27._PA_137_[PER]___
______GGCGCCAGGT____________
28._PA_137_[PER]___
AA______CG__AGGT____GG______
29._PA_137_[PER]___
________CG__AG________TT____
30._PA_137_[PER]___
________CG__AG________TT____
31._PA_137_[PER]___
AA______CG__AGGT____AG______
32._PA_137_[PER]___
______GGCG________GT__TT____
33._PA_137_[PER]___
AAAAACGGCGCCAGACCCACGGAAAGGG
34._PA_137_[PER]___
AAAAACGGCGCCAGACCCACGGAAAGGG
35._PA_137_[PER]___
AAAAACGGCGCCAGACCCACGGAAAGGG
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
GGTTCTAAGGAACCCCGGGGGGCTCCTT
1._PA_137_[PER]___
GGTTCTAAGGAACCCCGGGGGGCTCCTT
2._PA_137_[PER]___
GGTTCTAAGGAACCCCGGGGGGCTCCTT
3._PA_137_[PER]___
GGTTCTAAGGAACCCCGGGGGGCTCCTT
4._PA_137_[PER]___
GGTTCTAAGGAACCCCGGGGGGCTCCTT
5._PA_137_[PER]___
GGTTCTAAGGAACCCCGGGGGGCTCCTT
6._PA_137_[PER]___
GGTTCTAAGGAACCCCGGGGGGCTCCTT
7._PA_137_[PER]___
GGTTCTAAGGAACCCCGGGGGGCTCCTT
8._PA_137_[PER]___
GGTTCTAAGGAACCCCGGGGGGCTCCTT
9._PA_137_[PER]___
GGTTCTAAGGAACCCCGGGGGGCTCCTT
10._PA_137_[PER]___
____CT________________CTCC__
11._PA_137_[PER]___
____CT________________CTCC__
12._PA_137_[PER]___
____CT________________CTCC__
13._PA_137_[PER]___
____CT________________CTCC__
14._PA_137_[PER]___
____CT________________CTCC__
15._PA_137_[PER]___
____CT________________CTCC__
16._PA_137_[PER]___
____CT________________CTCC__
17._PA_137_[PER]___
____CT________________CTCC__
18._PA_137_[PER]___
____CT________________CTCC__
19._PA_137_[PER]___
____CT________________CTCC__
20._PA_137_[PER]___
GGTT____GG____________CT__TT
21._PA_137_[PER]___
____CT________________CTCC__
22._PA_137_[PER]___
____CT________________CTCC__
23._PA_137_[PER]___
____CT________________CTCC__
24._PA_137_[PER]___
____CT________________CTCC__
25._PA_137_[PER]___
____CT________________CTCC__
26._PA_137_[PER]___
____CT________________CTCC__
27._PA_137_[PER]___
GGTT________________________
28._PA_137_[PER]___
____CT________________CTCC__
29._PA_137_[PER]___
________GG__________________
30._PA_137_[PER]___
________GG__________________
31._PA_137_[PER]___
____CT________________CTCC__
32._PA_137_[PER]___
__TT__AA______________CT____
33._PA_137_[PER]___
CC__AG__GGAAGG__GGGGCCAGGGAA
34._PA_137_[PER]___
CC__AG__GGAAGG__GGGGCCAGGGAA
35._PA_137_[PER]___
CC__AG__GGAAGG__GGGGCCAGGGAA
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
GGCCCCCTAAGGGGACAGGGGGGGCCCC
1._PA_137_[PER]___
GGCCCCCTAAGGGGACAGGGGGGGCCCC
2._PA_137_[PER]___
GGCCCCCTAAGGGGACAGGGGGGGCCCC
3._PA_137_[PER]___
GGCCCCCTAAGGGGACAGGGGGGGCCCC
4._PA_137_[PER]___
GGCCCCCTAAGGGGACAGGGGGGGCCCC
5._PA_137_[PER]___
GGCCCCCTAAGGGGACAGGGGGGGCCCC
6._PA_137_[PER]___
GGCCCCCTAAGGGGACAGGGGGGGCCCC
7._PA_137_[PER]___
GGCCCCCTAAGGGGACAGGGGGGGCCCC
8._PA_137_[PER]___
GGCCCCCTAAGGGGACAGGGGGGGCCCC
9._PA_137_[PER]___
GGCCCCCTAAGGGGACAGGGGGGGCCCC
10._PA_137_[PER]___
__CC__CTAAGG__ACAGGGGG______
11._PA_137_[PER]___
__CC__CTAAGG__ACAGGGGG______
12._PA_137_[PER]___
__CC__CTAAGG__ACAGGGGG______
13._PA_137_[PER]___
__CC__CTAAGG__ACAGGGGG______
14._PA_137_[PER]___
__CC__CTAAGG__ACAGGGGG______
15._PA_137_[PER]___
__CC__CTAAGG__ACAGGGGG______
16._PA_137_[PER]___
__CC__CTAAGG__ACAGGGGG______
17._PA_137_[PER]___
__CC__CTAAGG__ACAGGGGG______
18._PA_137_[PER]___
__CC__CTAAGG__ACAGGGGG______
19._PA_137_[PER]___
__CC__CTAAGG__ACAGGGGG______
20._PA_137_[PER]___
__CCCCCTAC__GGACAGGGGGGG____
21._PA_137_[PER]___
__CC__CTACGG__ACAGGGGG______
22._PA_137_[PER]___
__CC__CTACGG__ACAGGGGG______
23._PA_137_[PER]___
______CTACGG__ACAGGGGG______
24._PA_137_[PER]___
______CTACGG__ACAGGGGG______
25._PA_137_[PER]___
__CC__CTACGG__ACAGGGGG______
26._PA_137_[PER]___
__CC__CTACGG__ACAGGGGG______
27._PA_137_[PER]___
GG____CTAC____ACAGGGGG______
28._PA_137_[PER]___
______CTACGG__ACAGGG________
29._PA_137_[PER]___
GG____________ACAG__GGGG____
30._PA_137_[PER]___
GG____________ACAG__GGGG____
31._PA_137_[PER]___
__CG__CTACGG__ACAGGGGT______
32._PA_137_[PER]___
__GGCC__AC__GGACAG________CC
33._PA_137_[PER]___
GGGGGGAGACGGGGACAGCCCCGG____
34._PA_137_[PER]___
GGGGGGAGACGGGGACAGCCCCGG____
35._PA_137_[PER]___
GGGGGGAGACGGGGACAGCCCCGG____
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
_Input profile
AGCTCCAAAAAAGGACCCCCATAATTCT
1._PA_137_[PER]___
AGCTCCAAAAAAGGACCCCCATAATTCT
2._PA_137_[PER]___
AGCTCCAAAAAAGGACCCCCATAATTCT
3._PA_137_[PER]___
AGCTCCAAAAAAGGACCCCCATAATTCT
4._PA_137_[PER]___
AGCTCCAAAAAAGGACCCCCATAATTCT
5._PA_137_[PER]___
AGCTCCAAAAAAGGACCCCCATAATTCT
6._PA_137_[PER]___
AGCTCCAAAAAAGGACCCCCATAATTCT
7._PA_137_[PER]___
AGCTCCAAAAAAGGACCCCCATAATTCT
8._PA_137_[PER]___
AGCTCCAAAAAAGGACCCCCATAATTCT
9._PA_137_[PER]___
AGCTCCAAAAAAGGACCCCCATAATTCT
10._PA_137_[PER]___
AGCT__________ACCC______TTCT
11._PA_137_[PER]___
AGCT__________ACCC______TTCT
12._PA_137_[PER]___
AGCT__________ACCC______TTCT
13._PA_137_[PER]___
AGCT__________ACCC______TTCT
14._PA_137_[PER]___
AGCT__________ACCC______TTCT
15._PA_137_[PER]___
AGCT__________ACCC______TTCT
16._PA_137_[PER]___
AGCT__________ACCC______TTCT
17._PA_137_[PER]___
AGCT__________ACCC______TTCT
18._PA_137_[PER]___
AGCT__________ACCC______TTCT
19._PA_137_[PER]___
AGCT__________ACCC______TTCT
20._PA_137_[PER]___
______________ACCC____AATT__
21._PA_137_[PER]___
AACT__________ACCC______TTCT
22._PA_137_[PER]___
AACT__________ACCC______TTCT
23._PA_137_[PER]___
AACT__________ACCC______TTCT
24._PA_137_[PER]___
AACT__________ACCC______TTCT
25._PA_137_[PER]___
AACT__________ACCC______CTCT
26._PA_137_[PER]___
AACT__________ACCC______CTCT
27._PA_137_[PER]___
______________AC____________
28._PA_137_[PER]___
AACT__________ACCC______TTCT
29._PA_137_[PER]___
AA____________ACCC____AA____
30._PA_137_[PER]___
AA____________AACC____AA____
31._PA_137_[PER]___
AACT__________ACCG______TTCT
32._PA_137_[PER]___
________________GG________CT
33._PA_137_[PER]___
__AGCCAAAAAA__ACGGGGATAAAAAG
34._PA_137_[PER]___
__AGCCAAAAAA__ACGGGGATAAAAAG
35._PA_137_[PER]___
__AGCCAAAAAA__ACGGGGATAAAAAG
 85 86 87 88 89 90 91 92 93      
_Input profile
CCCCAGTTCCTTTTAAGGX_XX_XX_XX_XX_X
1._PA_137_[PER]___
CCCCAGTTCCTTTTAAGGX_XX_XX_XX_XX_X
2._PA_137_[PER]___
CCCCAGTTCCTTTTAAGGX_XX_XX_XX_XX_X
3._PA_137_[PER]___
CCCCAGTTCCTTTTAAGGX_XX_XX_XX_XX_X
4._PA_137_[PER]___
CCCCAGTTCCTTTTAAGGX_XX_XX_XX_XX_X
5._PA_137_[PER]___
CCCCAGTTCCTTTTAAGGX_XX_XX_XX_XX_X
6._PA_137_[PER]___
CCCCAGTTCCTTTTAAGGX_XX_XX_XX_XX_X
7._PA_137_[PER]___
CCCCAGTTCCTTTTAAGGX_XX_XX_XX_XX_X
8._PA_137_[PER]___
CCCCAGTTCCTTTTAAGGX_XX_XX_XX_XX_X
9._PA_137_[PER]___
CCCCAGTTCCTTTTAAGGX_XX_XX_XX_XX_X
10._PA_137_[PER]___
CC__AG__CCTTTT____X_XX_XX_XX_XX_X
11._PA_137_[PER]___
CC__AG__CCTTTT____X_XX_XX_XX_XX_X
12._PA_137_[PER]___
CC__AG__CCTTTT____X_XX_XX_XX_XX_X
13._PA_137_[PER]___
CC__AG__CCTTTT____X_XX_XX_XX_XX_X
14._PA_137_[PER]___
CC__AG__CCTTTT____X_XX_XX_XX_XX_X
15._PA_137_[PER]___
CC__AG__CCTTTT____X_XX_XX_XX_XX_X
16._PA_137_[PER]___
CC__AG__CCTTTT____X_XX_XX_XX_XX_X
17._PA_137_[PER]___
CC__AG__CCTTTT____X_XX_XX_XX_XX_X
18._PA_137_[PER]___
CC__AG__CCTTTT____X_XX_XX_XX_XX_X
19._PA_137_[PER]___
CC__AG__CCTTTT____X_XX_XX_XX_XX_X
20._PA_137_[PER]___
____AGTTCCTT______X_XX_XX_XX_XX_X
21._PA_137_[PER]___
CC__AG__CCTTTT____X_XX_XX_XX_XX_X
22._PA_137_[PER]___
CC__AG__CCTTTT____X_XX_XX_XX_XX_X
23._PA_137_[PER]___
____AG__CCTTTT____X_XX_XX_XX_XX_X
24._PA_137_[PER]___
____AG__CCTTTT____X_XX_XX_XX_XX_X
25._PA_137_[PER]___
CC__AG__CCTTTT____X_XX_XX_XX_XX_X
26._PA_137_[PER]___
CC__AG__CCTTTT____X_XX_XX_XX_XX_X
27._PA_137_[PER]___
____AGCT__________X_XX_XX_XX_XX_X
28._PA_137_[PER]___
CC__AG__CCTTTT____X_XX_XX_XX_XX_X
29._PA_137_[PER]___
CC____TT__TT______X_XX_XX_XX_XX_X
30._PA_137_[PER]___
CC____TT__TT______X_XX_XX_XX_XX_X
31._PA_137_[PER]___
____AG____GTTT____X_XX_XX_XX_XX_X
32._PA_137_[PER]___
__________________X_XX_XX_XX_XX_X
33._PA_137_[PER]___
__GG____GGAAAATTGGX_XX_XX_XX_XX_X
34._PA_137_[PER]___
__GG____GGAAAATTGGX_XX_XX_XX_XX_X
35._PA_137_[PER]___
__GG____GGAAAATTGGX_XX_XX_XX_XX_X

Input profile: PA_137_[PER] GC-05-009-1-09

 
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

1._PA_137_[PER] GC-05-009-1-09

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

2._PA_137_[PER] GC-05-009-1-09

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP2
 Mars, 2018

3._PA_137_[PER] GC-05-009-1-09

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

4._PA_137_[PER] GC-05-117-3-19

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP3
 Mars, 2018

5._PA_137_[PER] GC-05-117-3-19

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

6._PA_137_[PER] GC-05-117-3-19

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

7._PA_137_[PER] GC-05-117-3-19

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

8._PA_137_[PER] GC-05-117-3-19

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

9._PA_137_[PER] GC-05-009-1-09

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

10._PA_137_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5319 3
 Dapeng Zhang, 2016

11._PA_137_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5109 2
 Dapeng Zhang, 2016

12._PA_137_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5109 4
 Dapeng Zhang, 2016

13._PA_137_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5109 5
 Dapeng Zhang, 2016

14._PA_137_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5109 1 > FP
 Dapeng Zhang, 2016

15._PA_137_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5109 3 > FP
 Dapeng Zhang, 2016

16._PA_137_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5319 2
 Dapeng Zhang, 2016

17._PA_137_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5319 4
 Dapeng Zhang, 2016

18._PA_137_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5319 5
 Dapeng Zhang, 2016

19._PA_137_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5319 1 > FP
 Dapeng Zhang, 2016

20._PA_137_[PER] RUQ_1081

98.8 %
41 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

21._PA_137_[PER] RUQ_1081

97.5 %
40 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

22._PA_137_[PER]

97.5 %
40 shared markers

Malaysian Cocoa Board (MCB), Malaysia
Location: Plot 1 - Row 7 C0181 28
 Dapeng Zhang, 2016

23._PA_137_[PER]

97.4 %
38 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Marper D430
 Dapeng Zhang, 2016

24._PA_137_[PER]

97.4 %
38 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 5A D274 T1
 Dapeng Zhang, 2016

25._PA_137_[PER] RUQ_36

96.3 %
40 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

26._PA_137_[PER] RUQ_1081

96.3 %
40 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

27._PA_137_[PER] RUQ_36

95.2 %
21 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

28._PA_137_[PER]

95 %
40 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 5A D274 T1
 Dapeng Zhang, 2014

29._PA_137_[PER] RUQ_1081

92.9 %
21 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

30._PA_137_[PER] RUQ_36

90.5 %
21 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

31._PA_137_[PER] RUQ_36

90 %
35 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

32._PA_137_[PER] PA137[PER]

80.8 %
26 shared markers

Center for Forestry Research and Technology Transfer, Vietnam
Location: CEFORTT
 Jocelyn De Wever et al., 2019

33._PA_137_[PER] RUQ_36

48.7 %
79 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

34._PA_137_[PER] MITC-000400

48.7 %
79 shared markers

USDA-SHRS, United States of America
 Mars, 2018

35._PA_137_[PER] PA_137_[PER]_Fld#_201_Plt#_2

48.7 %
79 shared markers

USDA-TARS, United States of America
Location: Field: 201, Tree: 2
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP860 17TcSNP1062 18TcSNP836 19TcSNP878 20TcSNP929
21TcSNP413 22TcSNP653 23TcSNP1149 24TcSNP174 25TcSNP32
26TcSNP372 27TcSNP448 28TcSNP872 29TcSNP953 30TcSNP1034
31TcSNP1175 32TcSNP1111 33TcSNP577 34TcSNP90 35TcSNP998
36TcSNP150 37TcSNP28 38TcSNP751 39TcSNP1484 40TcSNP602
41TcSNP561 42TcSNP894 43TcSNP1063 44TcSNP1126 45TcSNP1270
46TcSNP606 47TcSNP329 48TcSNP689 49TcSNP944 50TcSNP1242
51TcSNP1383 52TcSNP547 53TcSNP776 54TcSNP151 55TcSNP1520
56TcSNP799 57TcSNP899 58TcSNP226 59TcSNP1439 60TcSNP1442
61TcSNP193 62TcSNP25 63TcSNP364 64TcSNP144 65TcSNP230
66TcSNP560 67TcSNP723 68TcSNP731 69TcSNP701 70TcSNP1041
71TcSNP645 72TcSNP917 73Tcm003s01336581 74Tcm003s07402719 75Tcm001s00947643
76Tcm006s26664133 77Tcm002s20575712 78TcSNP529 79TcSNP1458 80TcSNP60
81TcSNP430 82TcSNP823 83TcSNP619 84TcSNP994 85TcSNP1144
86TcSNP1156 87TcSNP469 88TcSNP999 89TcSNP242 90TcSNP1253
91TcSNP1414 92TcSNP154 93TcSNP240