SNP Profiles of GU-300   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
AAAATTAAGGGGCCCCCCCCGGTTCCCC
1._GC-08-063-1-85
AAAATTAAGGGGCCCCCCCCGGTTCCCC
2._GC-08-063-1-85
AAAATTAAGGGGCCCCCCCCGGTTCCCC
3._GC-08-063-1-85
AAAATTAAGGGGCCCCCCCCGGTTCCCC
4._GC-08-063-1-85
AAAATTAAGGGGCCCCCCCCGGTTCCCC
5._GC-08-063-1-85
AAAATTAAGGGGCCCCCCCCGGTTCCCC
6._GC-08-063-1-85
AAAATTAAGGGGCCCCCCCCGGTTCC__
7._GC-08-63-1-85
AAAA__AAGGGG__GGGG__GGAAGGGG
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
AACCAAGGCCGGCCAATTGGTTAACCGG
1._GC-08-063-1-85
AACCAAGGCCGGCCAATTGGTTAACCGG
2._GC-08-063-1-85
AACCAAGGCCGGCCAATTGGTTAACCGG
3._GC-08-063-1-85
AACCAAGGCCGGCCAATTGGTTAACCGG
4._GC-08-063-1-85
AACCAAGGCCGGCCAATTGGTTAACCGG
5._GC-08-063-1-85
AACCAAGGCCGGCCAATTGGTTAACCGG
6._GC-08-063-1-85
AACCAAGGCCGGCCAATTGGTTAACCGG
7._GC-08-63-1-85
TTCCAACC__GGGGGGAAGGTTAAGGCC
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
AATTGGAACCCCGGTTGGTTAGTTAACC
1._GC-08-063-1-85
AATTGGAACCCCGGTTGGTTAGTTAACC
2._GC-08-063-1-85
AATTGGAACCCCGGTTGGTTAGTTAACC
3._GC-08-063-1-85
AATTGGAACCCCGGTTGGTTAGTTAACC
4._GC-08-063-1-85
AATTGGAACCCCGGTTGGTTAGTTAACC
5._GC-08-063-1-85
AATTGGAACCCCGGTTGGTTAGTTAACC
6._GC-08-063-1-85
AATTGGAACCCCGGTTGGTTAGTTAACC
7._GC-08-63-1-85
AAAACCAACCCCGGAACCAAAGAAAAGG
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
GGTTCCAAGGCCCCGGGGGTCCTTTTAA
1._GC-08-063-1-85
GGTTCCAAGGCCCCGGGGGTCCTTTTAA
2._GC-08-063-1-85
GGTTCCAAGGCCCCGGGGGTCCTTTTAA
3._GC-08-063-1-85
GGTTCCAAGGCCCCGGGGGTCCTTTTAA
4._GC-08-063-1-85
GGTTCCAAGGCCCCGGGGGTCCTTTTAA
5._GC-08-063-1-85
GGTTCCAAGGCCCCGGGGGTCCTTTTAA
6._GC-08-063-1-85
GGTTCCAAGGCCCCGGGGGTCCTTTTAA
7._GC-08-63-1-85
CC__GG__GGGG__GGGGACGGAAAAAA
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
CCTTCTAAGGGGAAAATTGGGGTTCCGG
1._GC-08-063-1-85
CCTTCTAAGGGGAAAATTGGGGTTCCGG
2._GC-08-063-1-85
CCTTCTAAGGGGAAAATTGGGGTTCCGG
3._GC-08-063-1-85
CCTTCTAAGGGGAAAATTGGGGTTCCGG
4._GC-08-063-1-85
CCTTCTAAGGGGAAAATTGGGGTTCCGG
5._GC-08-063-1-85
CCTTCTAAGGGGAAAATTGGGGTTCCGG
6._GC-08-063-1-85
CCTTCTAAGGGGAAAATTGGGGTTCCGG
7._GC-08-63-1-85
GGAAAGAAGGGGAAAAAACCGG______
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
_Input profile
ACAACCAAAACCGGCCTTAATTTTCTTT
1._GC-08-063-1-85
ACAACCAAAACCGGCCTTAATTTTCTTT
2._GC-08-063-1-85
ACAACCAAAACCGGCCTTAATTTTCTTT
3._GC-08-063-1-85
ACAACCAAAACCGGCCTTAATTTTCTTT
4._GC-08-063-1-85
ACAACCAAAACCGGCCTTAATTTTCTTT
5._GC-08-063-1-85
ACAACCAAAACCGGCCTTAATTTTCTTT
6._GC-08-063-1-85
ACAACCAAAACCGGCCTTAATTTTCTTT
7._GC-08-63-1-85
ACAACCAA__CCCCGGTTAAAAAA__AA
 85 86 87 88 89 90 91        
_Input profile
AACTCCTTTTAAGGX_XX_XX_XX_XX_XX_XX_X
1._GC-08-063-1-85
AACTCCTTTTAAGGX_XX_XX_XX_XX_XX_XX_X
2._GC-08-063-1-85
AACTCCTTTTAAGGX_XX_XX_XX_XX_XX_XX_X
3._GC-08-063-1-85
AACTCCTTTTAAGGX_XX_XX_XX_XX_XX_XX_X
4._GC-08-063-1-85
AACTCCTTTTAAGGX_XX_XX_XX_XX_XX_XX_X
5._GC-08-063-1-85
AACTCCTTTTAAGGX_XX_XX_XX_XX_XX_XX_X
6._GC-08-063-1-85
AACTCCTTTTAAGGX_XX_XX_XX_XX_XX_XX_X
7._GC-08-63-1-85
____GGAAAATTGGX_XX_XX_XX_XX_XX_XX_X

Input profile: GU_300 GC-08-063-1-85

 
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Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

1._GU_300 GC-08-063-1-85

identical
91 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

2._GU_300 GC-08-063-1-85

identical
91 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

3._GU_300 GC-08-063-1-85

identical
91 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6 > FP3
 Mars, 2018

4._GU_300 GC-08-063-1-85

identical
91 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

5._GU_300 GC-08-063-1-85

identical
91 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

6._GU_300 GC-08-063-1-85

identical
90 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5 > FP2
 Mars, 2018

7._GU_300 GC-08-63-1-85

48.1 %
77 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 8, Block: 1, Rep: 85, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

 

  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP1062 18TcSNP836 19TcSNP878 20TcSNP929
21TcSNP413 22TcSNP653 23TcSNP1149 24TcSNP174 25TcSNP32
26TcSNP372 27TcSNP448 28TcSNP872 29TcSNP953 30TcSNP1034
31TcSNP1175 32TcSNP1111 33TcSNP577 34TcSNP90 35TcSNP998
36TcSNP150 37TcSNP28 38TcSNP751 39TcSNP1484 40TcSNP602
41TcSNP561 42TcSNP894 43TcSNP1063 44TcSNP1126 45TcSNP1270
46TcSNP606 47TcSNP329 48TcSNP944 49TcSNP1242 50TcSNP1383
51TcSNP547 52TcSNP776 53TcSNP151 54TcSNP1520 55TcSNP799
56TcSNP899 57TcSNP226 58TcSNP1439 59TcSNP1442 60TcSNP193
61TcSNP25 62TcSNP364 63TcSNP144 64TcSNP230 65TcSNP560
66TcSNP723 67TcSNP731 68TcSNP701 69TcSNP1041 70TcSNP645
71Tcm003s01336581 72Tcm003s07402719 73Tcm001s00947643 74Tcm006s26664133 75Tcm002s20575712
76TcSNP529 77TcSNP1458 78TcSNP60 79TcSNP430 80TcSNP823
81TcSNP619 82TcSNP994 83TcSNP1144 84TcSNP1156 85TcSNP469
86TcSNP999 87TcSNP242 88TcSNP1253 89TcSNP1414 90TcSNP154
91TcSNP240