SNP Profiles of UCAYALI 12   View Data

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 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
1._SCA_11___
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
2._SCA_11___
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
3._SCA_11___
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
4._SCA_11___
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
5._SCA_11___
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
6._SCA_11___
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
7._SCA_11___
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
8._SCA_11___
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
9._SCA_11___
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
10._SCA_11___
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
11._SCA_11___
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
12._SCA_11___
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
13._SCA_11___
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
14._SCA_11___
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
15._SCA_11___
ATCCCCCCAGAGTTTTCCTTAGTT__TT
16._SCA_11___
AT__CCCCAGAGTTTTCCTTAGTTTTTT
17._SCA_11___
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
18._SCA_11___
ATCCCCCCAG__TTTTCCTTAGTTTTTT
19._SCA_11___
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
20._SCA_11___
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
21._SCA_11___
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
22._SCA_11___
ATCCCCCCAGAGTTTTCCTT__TTTTTT
23._SCA_11___
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
24._SCA_11___
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
25._SCA_11___
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
26._SCA_11___
ATCCCCCC________CCTTAG__TT__
27._SCA_11___
ATCCCCCC________CCTTAG__TT__
28._SCA_11___
ATCCCCCC________CCTTAG__TT__
29._SCA_11___
ATCCCCCC________CCTTAG__TT__
30._SCA_11___
ATCCCCCC________CCTTAG__TT__
31._SCA_11___
ATCCCCCC________CCTTAG__TT__
32._SCA_11___
ATCCCCCC________CCTTAG__TT__
33._SCA_11___
ATCCCCCC________CCTTAG__TT__
34._SCA_11___
ATCCCCCC________CCTTAG__TT__
35._SCA_11___
ATCCCCCC________CCTTAG__TT__
36._SCA_11___
ATCCCCCC________CCTTAG__TT__
37._SCA_11___
ATCCCCCC________CCTTAG__TT__
38._SCA_11___
ATCCCCCC________CCTTAG__TT__
39._SCA_11___
ATCCCCCC________CCTTAG__TT__
40._SCA_11___
ATCCCCCC________CCTTAG__TT__
41._SCA_11___
ATCCCCCC________CCTTAG__TT__
42._SCA_11___
ATCCCCCC________CCTTAG__TT__
43._SCA_11___
ATCCCCCC________CCTTAG__TT__
44._SCA_11___
ATCCCCCC________CCTTAG__TT__
45._SCA_11___
ATCCCCCC________CCTTAG__TT__
46._SCA_11___
ATCCCCCC________CCTTAG__TT__
47._SCA_11___
ATCCCCCC________CCTTAG__TT__
48._SCA_11___
ATCCCCCC________CCTT____TT__
49._SCA_11___
ATCCCCCC________CCTTAG______
50._SCA_11___
AT__CCCC________CCTTAG__TT__
51._SCA_11___
ATCCCCCC________CCTTAG__TT__
52._SCA_11___
______CC____CT______________
53._SCA_11___
AACCCCCC________CCCTAA__TT__
54._SCA_11___
AACCCCCC________CCTTAA__TT__
55._SCA_11___
____CCCC____CC__CC____TTTT__
56._SCA_11___
______AA________CC______CT__
57._SCA_11___
ATCC__CCAGAG__AAGG__AGAAAAAA
58._SCA_11___
AACC__CCGGAA__AAGG__AAAAAAAA
59._SCA_11___
AAAATTCC________CTTTGG__CC__
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
ATAAAAGGCCCGCCCCAACTGGAAAAGG
1._SCA_11___
ATAAAAGGCCCGCCCCAACTGGAAAAGG
2._SCA_11___
ATAAAAGGCCCGCCCCAACTGGAAAAGG
3._SCA_11___
ATAAAAGGCCCGCCCCAACTGGAAAAGG
4._SCA_11___
ATAAAAGGCCCGCCCCAACTGGAAAAGG
5._SCA_11___
ATAAAAGGCCCGCCCCAACTGGAAAAGG
6._SCA_11___
ATAAAAGGCCCGCCCCAACTGGAAAAGG
7._SCA_11___
ATAAAAGGCCCGCCCCAACTGGAAAAGG
8._SCA_11___
ATAAAAGGCCCGCCCCAACTGGAAAAGG
9._SCA_11___
ATAAAAGGCCCGCCCCAACTGGAAAAGG
10._SCA_11___
ATAAAAGGCCCGCCCCAACTGGAAAAGG
11._SCA_11___
ATAAAAGGCCCGCCCCAACTGGAAAAGG
12._SCA_11___
ATAAAAGGCCCGCCCCAACTGGAAAAGG
13._SCA_11___
ATAAAAGGCCCGCCCCAACTGGAAAAGG
14._SCA_11___
ATAAAAGGCCCGCCCCAACTGGAAAAGG
15._SCA_11___
ATAAAAGGCCCGCCCCAACTGGAAAAGG
16._SCA_11___
ATAAAAGGCCCGCCCCAACTGGAAAAGG
17._SCA_11___
ATAAAAGGCCCGCCCCAACTGGAAAAGG
18._SCA_11___
ATAAAAGGCCCGCCCCAACTGGAAAAGG
19._SCA_11___
ATAAAAGGCCCGCCCCAACTGGAAAAGG
20._SCA_11___
ATAAAAGGCCCGCCCCAACTGGAAAAGG
21._SCA_11___
ATAAAAGGCCCGCCCCAACTGGAAAAGG
22._SCA_11___
ATAAAAGGCCCGCCCCAACTGGAAAAGG
23._SCA_11___
ATAAAAGGCCCGCCCCAACTGGAAAAGG
24._SCA_11___
ATAAAAGGCCCGCCCCAACTGGAAAAGG
25._SCA_11___
ATAAAAGGCCCGCCCCAACTGGAAAAGG
26._SCA_11___
______GG____CC________AAAA__
27._SCA_11___
______GG____CC________AAAA__
28._SCA_11___
______GG____CC________AAAA__
29._SCA_11___
______GG____CC________AAAA__
30._SCA_11___
______GG____CC________AAAA__
31._SCA_11___
______GG____CC________AAAA__
32._SCA_11___
______GG____CC________AAAA__
33._SCA_11___
______GG____CC________AAAA__
34._SCA_11___
______GG____CC________AAAA__
35._SCA_11___
______GG____CC________AAAA__
36._SCA_11___
______GG____CC________AAAA__
37._SCA_11___
______GG____CC________AAAA__
38._SCA_11___
______GG____CC________AAAA__
39._SCA_11___
______GG____CC________AAAA__
40._SCA_11___
______GG____CC________AAAA__
41._SCA_11___
______GG____CC________AAAA__
42._SCA_11___
______GG____CC________AAAA__
43._SCA_11___
______GG____CC________AAAA__
44._SCA_11___
______GG____CC________AAAA__
45._SCA_11___
______GG____CC________AAAA__
46._SCA_11___
______GG____CC________AAAA__
47._SCA_11___
______GG____CC________AAAA__
48._SCA_11___
______GG____CC________AAAA__
49._SCA_11___
______GG____CC________AAAA__
50._SCA_11___
______GG____CC________AAAA__
51._SCA_11___
______GG____CC________AAAA__
52._SCA_11___
______GGCC__________________
53._SCA_11___
______GG____CC________AAAA__
54._SCA_11___
______GG____CC________AAAA__
55._SCA_11___
__________GG________GG__AAGG
56._SCA_11___
____GG____GG__CT____GG__ATCC
57._SCA_11___
ATAAAAGGGG__CCGGAAAGGGAAAACC
58._SCA_11___
AAACAAGGGG__CCGGAGGGGGAAAA__
59._SCA_11___
______AA____GG________TTAT__
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
1._SCA_11___
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
2._SCA_11___
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
3._SCA_11___
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
4._SCA_11___
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
5._SCA_11___
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
6._SCA_11___
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
7._SCA_11___
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
8._SCA_11___
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
9._SCA_11___
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
10._SCA_11___
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
11._SCA_11___
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
12._SCA_11___
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
13._SCA_11___
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
14._SCA_11___
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
15._SCA_11___
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
16._SCA_11___
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
17._SCA_11___
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
18._SCA_11___
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
19._SCA_11___
TTTTTTGGCG__AAGGTTTTAGCCGGCC
20._SCA_11___
TTTTTTGGCGCCAAGGTTTTAGCC__CC
21._SCA_11___
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
22._SCA_11___
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
23._SCA_11___
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
24._SCA_11___
TTTTTTGGCGCCAAGGTT__AGCCGGCC
25._SCA_11___
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
26._SCA_11___
TT______CG__AAGG____AG______
27._SCA_11___
TT______CG__AAGG____AG______
28._SCA_11___
TT______CG__AAGG____AG______
29._SCA_11___
TT______CG__AAGG____AG______
30._SCA_11___
TT______CG__AAGG____AG______
31._SCA_11___
TT______CG__AAGG____AG______
32._SCA_11___
TT______CG__AAGG____AG______
33._SCA_11___
TT______CG__AAGG____AG______
34._SCA_11___
TT______CG__AAGG____AG______
35._SCA_11___
TT______CG__AAGG____AG______
36._SCA_11___
TT______CG__AAGG____AG______
37._SCA_11___
TT______CG__AAGG____AG______
38._SCA_11___
TT______CG__AAGG____AG______
39._SCA_11___
TT______CG__AAGG____AG______
40._SCA_11___
TT______CG__AAGG____AG______
41._SCA_11___
TT______CG__AAGG____AG______
42._SCA_11___
TT______CG__AAGG____AG______
43._SCA_11___
TT______CG__AAGG____AG______
44._SCA_11___
TT______CG__AAGG____AG______
45._SCA_11___
TT______CG__AAGG____AG______
46._SCA_11___
TT______CG__AAGG____AG______
47._SCA_11___
TT______CG__AAGG____AG______
48._SCA_11___
TT______CG__AAGG____AG______
49._SCA_11___
TT______CG__AAGG____AG______
50._SCA_11___
TT______CG__AAGG____AG______
51._SCA_11___
TT______CG__AAGG____AG______
52._SCA_11___
________CG__AA________CC____
53._SCA_11___
TT______CC__AAGG____AG______
54._SCA_11___
TT______CC__AAGG____AA______
55._SCA_11___
______AGCCCCAAGG____AACC____
56._SCA_11___
______GGGG________TT__CC____
57._SCA_11___
TTAAAAGGCGCCAACCAAAAAGGGGGGG
58._SCA_11___
TTAAAAAGCCCCAACCAAAAAAGGGGGG
59._SCA_11___
AA______CC__AATT____AA______
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
GGTTTTGGAGAACCCCAAAAGGTTTTCC
1._SCA_11___
GGTTTTGGAGAACCCCAAAAGGTTTTCC
2._SCA_11___
GGTTTTGGAGAACCCCAAAAGGTTTTCC
3._SCA_11___
GGTTTTGGAGAACCCCAAAAGGTTTTCC
4._SCA_11___
GGTTTTGGAGAACCCCAAAAGGTTTTCC
5._SCA_11___
GGTTTTGGAGAACCCCAAAAGGTTTTCC
6._SCA_11___
GGTTTTGGAGAACCCCAAAAGGTTTTCC
7._SCA_11___
GGTTTTGGAGAACCCCAAAAGGTTTTCC
8._SCA_11___
GGTTTTGGAGAACCCCAAAAGGTTTTCC
9._SCA_11___
GGTTTTGGAGAACCCCAAAAGGTTTTCC
10._SCA_11___
GGTTTTGGAGAACCCCAAAAGGTTTTCC
11._SCA_11___
GGTTTTGGAGAACCCCAAAAGGTTTTCC
12._SCA_11___
GGTTTTGGAGAACCCCAAAAGGTTTTCC
13._SCA_11___
GGTTTTGGAGAACCCCAAAAGGTTTTCC
14._SCA_11___
GGTTTTGGAGAACCCCAAAAGGTTTTCC
15._SCA_11___
GGTTTTGGAGAACCCCAAAAGGTTTTCC
16._SCA_11___
GGTTTTGGAGAACCCCAAAAGGTTTTCC
17._SCA_11___
GGTTTTGGAGAACCCCAAAAGGTTTTCC
18._SCA_11___
GGTTTTGGAGAACCCCAAAAGGTTTTCC
19._SCA_11___
GGTTTTGGAGAACCCCAAAAGGTTTTCC
20._SCA_11___
GGTTTTGGAGAACCCCAAAAGGTTTTCC
21._SCA_11___
GGTTTTGGAG__CCCCAAAAGGTTTTCC
22._SCA_11___
GGTTTTGGAGAACCCCAAAAGGTTTTCC
23._SCA_11___
GGTTTTGGAG__CCCCAAAAGGTTTTCC
24._SCA_11___
GGTTTTGGAGAACCCCAAAAGGTTTTCC
25._SCA_11___
GGTTTTGGAGAACCCCAAAAGG__TTCC
26._SCA_11___
____TT__________________TTCC
27._SCA_11___
____TT__________________TTCC
28._SCA_11___
____TT__________________TTCC
29._SCA_11___
____TT__________________TTCC
30._SCA_11___
____TT__________________TTCC
31._SCA_11___
____TT__________________TTCC
32._SCA_11___
____TT__________________TTCC
33._SCA_11___
____TT__________________TTCC
34._SCA_11___
____TT__________________TTCC
35._SCA_11___
____TT__________________TTCC
36._SCA_11___
____TT__________________TTCC
37._SCA_11___
____TT__________________TTCC
38._SCA_11___
____TT__________________TTCC
39._SCA_11___
____TT__________________TTCC
40._SCA_11___
____TT__________________TTCC
41._SCA_11___
____TT__________________TTCC
42._SCA_11___
____TT__________________TTCC
43._SCA_11___
____TT__________________TTCC
44._SCA_11___
____TT__________________TTCC
45._SCA_11___
____TT__________________TTCC
46._SCA_11___
____TT__________________TTCC
47._SCA_11___
____TT__________________TTCC
48._SCA_11___
____TT__________________TTCC
49._SCA_11___
____TT__________________TTCC
50._SCA_11___
____TT__________________TTCC
51._SCA_11___
____TT__________________TTCC
52._SCA_11___
________AG__________________
53._SCA_11___
____TT__________________TTCC
54._SCA_11___
____TT__________________TTCC
55._SCA_11___
GGTT____AA____________CCTT__
56._SCA_11___
__TT__AA________________CC__
57._SCA_11___
CC__AA__AGAAGG__AAAACCAGAAGG
58._SCA_11___
CC__AA__AAAAGG__AAAACCGGAAGG
59._SCA_11___
____CC__________________CTCT
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
TTAGCCCCTTCCCGGGAAAAGGGGAACT
1._SCA_11___
TTAGCCCCTTCCCGGGAAAAGGGGAACT
2._SCA_11___
TTAGCCCCTTCCCGGGAAAAGGGGAACT
3._SCA_11___
TTAGCCCCTTCCCGGGAAAAGGGGAACT
4._SCA_11___
TTAGCCCCTTCCCGGGAAAAGGGGAACT
5._SCA_11___
TTAGCCCCTTCCCGGGAAAAGGGGAACT
6._SCA_11___
TTAGCCCCTTCCCGGGAAAAGGGGAACT
7._SCA_11___
TTAGCCCCTTCCCGGGAAAAGGGGAACT
8._SCA_11___
TTAGCCCCTTCCCGGGAAAAGGGGAACT
9._SCA_11___
TTAGCCCCTTCCCGGGAAAAGGGGAACT
10._SCA_11___
TTAGCCCCTTCCCGGGAAAAGGGGAACT
11._SCA_11___
TTAGCCCCTTCCCGGGAAAAGGGGAACT
12._SCA_11___
TTAGCCCCTTCCCGGGAAAAGGGGAACT
13._SCA_11___
TTAGCCCCTTCCCGGGAAAAGGGGAACT
14._SCA_11___
TTAGCCCCTTCCCGGGAAAAGGGGAACT
15._SCA_11___
TTAGCCCCTTCCCGGGAAAAGGGGAACT
16._SCA_11___
TTAGCCCCTTCCCGGGAAAAGGGGAACT
17._SCA_11___
TTAGCCCCTTCCCGGGAAAA__GGAACT
18._SCA_11___
TTAGCCCCTTCCCGGGAAAAGGGGAACT
19._SCA_11___
TTAGCCCCTTCCCGGGAAAAGGGGAACT
20._SCA_11___
TTAGCCCCTTCCCGGGAAAAGGGGAACT
21._SCA_11___
TTAGCCCCTTCCCGGGAAAAGGGGAACT
22._SCA_11___
TTAGCCCCTTCCCGGGAAAAGGGGAACT
23._SCA_11___
TTAGCCCCTTCCCGGGAAAAGGGGAACT
24._SCA_11___
TTAGCCCCTTCCCGGGAAAAGGGGAACT
25._SCA_11___
TT__CCCCTTCCCGGGAAAAGGGGAACT
26._SCA_11___
____CC__TTCCCG__AAAAGGGG____
27._SCA_11___
____CC__TTCCCG__AAAAGGGG____
28._SCA_11___
____CC__TTCCCG__AAAAGGGG____
29._SCA_11___
____CC__TTCCCG__AAAAGGGG____
30._SCA_11___
____CC__TTCCCG__AAAAGGGG____
31._SCA_11___
____CC__TTCCCG__AAAAGGGG____
32._SCA_11___
____CC__TTCCCG__AAAAGGGG____
33._SCA_11___
____CC__TTCCCG__AAAAGGGG____
34._SCA_11___
____CC__TTCCCG__AAAAGGGG____
35._SCA_11___
____CC__TTCCCG__AAAAGGGG____
36._SCA_11___
____CC__TTCCCG__AAAAGGGG____
37._SCA_11___
____CC__TTCCCG__AAAAGGGG____
38._SCA_11___
____CC__TTCCCG__AAAAGGGG____
39._SCA_11___
____CC__TTCCCG__AAAAGGGG____
40._SCA_11___
____CC__TTCCCG__AAAAGGGG____
41._SCA_11___
____CC__TTCCCG__AAAAGGGG____
42._SCA_11___
____CC__TTCCCG__AAAAGGGG____
43._SCA_11___
____CC__TTCCCG__AAAAGGGG____
44._SCA_11___
____CC__TTCCCG__AAAAGGGG____
45._SCA_11___
____CC__TTCCCG__AAAAGGGG____
46._SCA_11___
____CC__TTCCCG__AAAAGGGG____
47._SCA_11___
____CC__TTCCCG__AAAAGGGG____
48._SCA_11___
____CC__TTCCCG__AAAAGGGG____
49._SCA_11___
____CC__TTCCCG__AAAAGGGG____
50._SCA_11___
____CC__TTCCCG__AAAAGGGG____
51._SCA_11___
____CC__TTCCCG__AAAA__GG____
52._SCA_11___
__AG____________AAAA__GGAA__
53._SCA_11___
____CG__TTCCCG__ACAGGGGG____
54._SCA_11___
____CG__TTCCCG__ACAGGGGG____
55._SCA_11___
TT__CGCCTTCC__GGCCAGGGGGAA__
56._SCA_11___
____CGCC__AA__GGACAG________
57._SCA_11___
AAAGGGGGAACCCGGGAAAACCCCAA__
58._SCA_11___
AAAGCGGGAACCCGGGACAGCCCCAA__
59._SCA_11___
____CC__CTACGG__CCAATTGG____
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
_Input profile
CCAACCGGCCCCAAAACCCCAACCTTCC
1._SCA_11___
CCAACCGGCCCCAAAACCCCAACCTTCC
2._SCA_11___
CCAACCGGCCCCAAAACCCCAACCTTCC
3._SCA_11___
CCAACCGGCCCCAAAACCCCAACCTTCC
4._SCA_11___
CCAACCGGCCCCAAAACCCCAACCTTCC
5._SCA_11___
CCAACCGGCCCCAAAACCCCAACCTTCC
6._SCA_11___
CCAACCGGCCCCAAAACCCCAACCTTCC
7._SCA_11___
CCAACCGGCCCCAAAACCCCAACCTTCC
8._SCA_11___
CCAACCGGCCCCAAAACCCCAACCTTCC
9._SCA_11___
CCAACCGGCCCCAAAACCCCAACCTTCC
10._SCA_11___
CCAACCGGCCCCAAAACCCCAACCTTCC
11._SCA_11___
CCAACCGGCCCCAAAACCCCAACCTTCC
12._SCA_11___
CCAACCGGCCCCAAAACCCCAACCTTCC
13._SCA_11___
CCAACCGGCCCCAAAACCCCAACCTTCC
14._SCA_11___
CCAACCGGCCCCAAAACCCCAACCTTCC
15._SCA_11___
CCAACCGGCCCCAAAACCCCAACCTTCC
16._SCA_11___
CCAACCGGCCCCAAAACCCCAACCTTCC
17._SCA_11___
CCAACCGGCCCCAAAACCCCAACCTTCC
18._SCA_11___
CCAACCGGCCCCAAAACCCCAACCTTCC
19._SCA_11___
CCAACCGGCCCCAAAACCCCAACCTTCC
20._SCA_11___
CCAACCGGCCCCAAAACCCCAACCTTCC
21._SCA_11___
CCAACCGGCCCCAAAACCCCAACCTTCC
22._SCA_11___
CCAACCGGCCCCAAAACCCCAACCTTCC
23._SCA_11___
CCAACCGGCCCCAAAACCCCAACCTTCC
24._SCA_11___
CCAACCGGCCCCAAAACCCCAACCTTCC
25._SCA_11___
CCAACCGGCCCCAAAACCCCAACCTTCC
26._SCA_11___
__AA__________AACC______TTCC
27._SCA_11___
__AA__________AACC______TTCC
28._SCA_11___
__AA__________AACC______TTCC
29._SCA_11___
__AA__________AACC______TTCC
30._SCA_11___
__AA__________AACC______TTCC
31._SCA_11___
__AA__________AACC______TTCC
32._SCA_11___
__AA__________AACC______TTCC
33._SCA_11___
__AA__________AACC______TTCC
34._SCA_11___
__AA__________AACC______TTCC
35._SCA_11___
__AA__________AACC______TTCC
36._SCA_11___
__AA__________AACC______TTCC
37._SCA_11___
__AA__________AACC______TTCC
38._SCA_11___
__AA__________AACC______TTCC
39._SCA_11___
__AA__________AACC______TTCC
40._SCA_11___
__AA__________AACC______TTCC
41._SCA_11___
__AA__________AACC______TTCC
42._SCA_11___
__AA__________AACC______TTCC
43._SCA_11___
__AA__________AACC______TTCC
44._SCA_11___
__AA__________AACC______TTCC
45._SCA_11___
__AA__________AACC______TTCC
46._SCA_11___
__AA__________AACC______TTCC
47._SCA_11___
__AA__________AACC______TTCC
48._SCA_11___
__AA__________AACC______TTCC
49._SCA_11___
__AA__________AACC______TTCC
50._SCA_11___
__AA__________AACC______TTCC
51._SCA_11___
__AA__________AACC______TTCC
52._SCA_11___
__AG__________AACC____CC____
53._SCA_11___
__GG__________AACC______TTCC
54._SCA_11___
__GG__________AACC______TTCC
55._SCA_11___
______________AACC____CCTT__
56._SCA_11___
CG______________GG________CT
57._SCA_11___
____CCGGCCCC__AAGGGGAACCAAGG
58._SCA_11___
____CCGGCCCC__AAGGGGAACCAAGG
59._SCA_11___
__AA__________CCGG______CCCT
 85 86 87 88 89 90 91 92 93      
_Input profile
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
1._SCA_11___
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
2._SCA_11___
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
3._SCA_11___
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
4._SCA_11___
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
5._SCA_11___
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
6._SCA_11___
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
7._SCA_11___
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
8._SCA_11___
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
9._SCA_11___
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
10._SCA_11___
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
11._SCA_11___
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
12._SCA_11___
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
13._SCA_11___
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
14._SCA_11___
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
15._SCA_11___
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
16._SCA_11___
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
17._SCA_11___
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
18._SCA_11___
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
19._SCA_11___
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
20._SCA_11___
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
21._SCA_11___
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
22._SCA_11___
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
23._SCA_11___
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
24._SCA_11___
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
25._SCA_11___
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
26._SCA_11___
CC__GG__TTGGCC____X_XX_XX_XX_XX_X
27._SCA_11___
CC__GG__TTGGCC____X_XX_XX_XX_XX_X
28._SCA_11___
CC__GG__TTGGCC____X_XX_XX_XX_XX_X
29._SCA_11___
CC__GG__TTGGCC____X_XX_XX_XX_XX_X
30._SCA_11___
CC__GG__TTGGCC____X_XX_XX_XX_XX_X
31._SCA_11___
CC__GG__TTGGCC____X_XX_XX_XX_XX_X
32._SCA_11___
CC__GG__TTGGCC____X_XX_XX_XX_XX_X
33._SCA_11___
CC__GG__TTGGCC____X_XX_XX_XX_XX_X
34._SCA_11___
CC__GG__TTGGCC____X_XX_XX_XX_XX_X
35._SCA_11___
CC__GG__TTGGCC____X_XX_XX_XX_XX_X
36._SCA_11___
CC__GG__TTGGCC____X_XX_XX_XX_XX_X
37._SCA_11___
CC__GG__TTGGCC____X_XX_XX_XX_XX_X
38._SCA_11___
CC__GG__TTGGCC____X_XX_XX_XX_XX_X
39._SCA_11___
CC__GG__TTGGCC____X_XX_XX_XX_XX_X
40._SCA_11___
CC__GG__TTGGCC____X_XX_XX_XX_XX_X
41._SCA_11___
CC__GG__TTGGCC____X_XX_XX_XX_XX_X
42._SCA_11___
CC__GG__TTGGCC____X_XX_XX_XX_XX_X
43._SCA_11___
CC__GG__TTGGCC____X_XX_XX_XX_XX_X
44._SCA_11___
CC__GG__TTGGCC____X_XX_XX_XX_XX_X
45._SCA_11___
CC__GG__TTGGCC____X_XX_XX_XX_XX_X
46._SCA_11___
CC__GG__TTGGCC____X_XX_XX_XX_XX_X
47._SCA_11___
CC__GG__TTGGCC____X_XX_XX_XX_XX_X
48._SCA_11___
CC__GG__TTGGCC____X_XX_XX_XX_XX_X
49._SCA_11___
CC__GG__TTGGCC____X_XX_XX_XX_XX_X
50._SCA_11___
CC__GG__TTGGCC____X_XX_XX_XX_XX_X
51._SCA_11___
CC__GG__TTGGCC____X_XX_XX_XX_XX_X
52._SCA_11___
CC____CC__GG______X_XX_XX_XX_XX_X
53._SCA_11___
CC__GG__CTGTCT____X_XX_XX_XX_XX_X
54._SCA_11___
CC__GG__CTGTCT____X_XX_XX_XX_XX_X
55._SCA_11___
____GGCCCTGT______X_XX_XX_XX_XX_X
56._SCA_11___
__________________X_XX_XX_XX_XX_X
57._SCA_11___
__GG____AACCGGAAGGX_XX_XX_XX_XX_X
58._SCA_11___
__GG____AGACAGAAGGX_XX_XX_XX_XX_X
59._SCA_11___
TT__AG__CTGGTT____X_XX_XX_XX_XX_X

Input profile: SCA_11 GC-08-157-3-56

 
Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

1._SCA_11 GC-01-117-6-14

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

2._SCA_11 GC-01-117-6-14

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP2
 Mars, 2018

3._SCA_11 GC-01-117-6-14

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP3
 Mars, 2018

4._SCA_11 GC-01-117-6-14

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10 > FP4
 Mars, 2018

5._SCA_11 GC-08-157-3-56

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

6._SCA_11 GC-08-157-3-56

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

7._SCA_11 GC-08-157-3-56

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

8._SCA_11 GC-08-157-3-56

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

9._SCA_11 GC-08-157-3-56

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

10._SCA_11 GC-08-157-3-56

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 23
Notes: 23
 Mars, 2018

11._SCA_11 GC-08-157-3-56

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 20
Notes: 20
 Mars, 2018

12._SCA_11 GC-08-157-3-56

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 18
Notes: 18
 Mars, 2018

13._SCA_11 GC-08-157-3-56

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14
 Mars, 2018

14._SCA_11 GC-08-157-3-56

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

15._SCA_11 GC-01-117-6-14

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

16._SCA_11 GC-08-157-3-56

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

17._SCA_11 GC-08-157-3-56

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

18._SCA_11 GC-08-157-3-56

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 26
Notes: 26
 Mars, 2018

19._SCA_11 GC-08-157-3-56

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 25
Notes: 25
 Mars, 2018

20._SCA_11 GC-08-157-3-56

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 24
Notes: 24
 Mars, 2018

21._SCA_11 GC-08-157-3-56

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 19
Notes: 19
 Mars, 2018

22._SCA_11 GC-08-157-3-56

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 15
Notes: 15
 Mars, 2018

23._SCA_11 GC-08-157-3-56

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

24._SCA_11 GC-08-157-3-56

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

25._SCA_11 GC-01-117-6-14

identical
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

26._SCA_11

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8356 10
 Dapeng Zhang, 2016

27._SCA_11

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8356 11
 Dapeng Zhang, 2016

28._SCA_11

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8356 13
 Dapeng Zhang, 2016

29._SCA_11

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8356 14
 Dapeng Zhang, 2016

30._SCA_11

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8356 18
 Dapeng Zhang, 2016

31._SCA_11

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8356 19
 Dapeng Zhang, 2016

32._SCA_11

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8356 20
 Dapeng Zhang, 2016

33._SCA_11

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8356 23
 Dapeng Zhang, 2016

34._SCA_11

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8356 24
 Dapeng Zhang, 2016

35._SCA_11

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8356 25
 Dapeng Zhang, 2016

36._SCA_11

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8356 26
 Dapeng Zhang, 2016

37._SCA_11

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8356 9
 Dapeng Zhang, 2016

38._SCA_11

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1614 13
 Dapeng Zhang, 2016

39._SCA_11

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1614 1 > FP
 Dapeng Zhang, 2016

40._SCA_11

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1614 10 > F
 Dapeng Zhang, 2016

41._SCA_11

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1614 2 > FP
 Dapeng Zhang, 2016

42._SCA_11

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1614 3 > FP
 Dapeng Zhang, 2016

43._SCA_11

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8356 3
 Dapeng Zhang, 2016

44._SCA_11

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8356 4
 Dapeng Zhang, 2016

45._SCA_11

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8356 5
 Dapeng Zhang, 2016

46._SCA_11

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8356 6
 Dapeng Zhang, 2016

47._SCA_11

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8356 8
 Dapeng Zhang, 2016

48._SCA_11

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8356 15
 Dapeng Zhang, 2016

49._SCA_11

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1614 9
 Dapeng Zhang, 2016

50._SCA_11

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8356 1
 Dapeng Zhang, 2016

51._SCA_11

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8356 2
 Dapeng Zhang, 2016

52._SCA_11 RUQ_1686

95 %
20 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

53._SCA_11 RUQ_374

84.2 %
38 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

54._SCA_11

84.2 %
38 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Marper D 639
 Dapeng Zhang, 2016

55._SCA_11 RUQ_374

81.7 %
41 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

56._SCA_11 RUQ_1686

52 %
25 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Location: GBR207
 Jocelyn De Wever et al., 2019

57._SCA_11 RUQ_1686

51.9 %
79 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

58._SCA_11 MITC-000057

44.9 %
78 shared markers

USDA-SHRS, United States of America
 Mars, 2018

59._SCA_11

39.5 %
38 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
 Dapeng Zhang, 2016

 


  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP860 18TcSNP1062 19TcSNP836 20TcSNP878
21TcSNP929 22TcSNP413 23TcSNP653 24TcSNP1149 25TcSNP174
26TcSNP32 27TcSNP372 28TcSNP448 29TcSNP953 30TcSNP1034
31TcSNP1175 32TcSNP1111 33TcSNP577 34TcSNP90 35TcSNP998
36TcSNP150 37TcSNP28 38TcSNP751 39TcSNP1484 40TcSNP602
41TcSNP561 42TcSNP894 43TcSNP1063 44TcSNP1126 45TcSNP1270
46TcSNP606 47TcSNP329 48TcSNP689 49TcSNP944 50TcSNP1242
51TcSNP1383 52TcSNP547 53TcSNP776 54TcSNP1309 55TcSNP151
56TcSNP1520 57TcSNP799 58TcSNP899 59TcSNP226 60TcSNP1439
61TcSNP1442 62TcSNP193 63TcSNP25 64TcSNP364 65TcSNP144
66TcSNP230 67TcSNP560 68TcSNP723 69TcSNP731 70TcSNP701
71TcSNP1041 72TcSNP645 73Tcm003s01336581 74Tcm003s07402719 75Tcm001s00947643
76Tcm006s26664133 77Tcm002s20575712 78TcSNP529 79TcSNP1458 80TcSNP60
81TcSNP430 82TcSNP823 83TcSNP619 84TcSNP994 85TcSNP1144
86TcSNP1156 87TcSNP469 88TcSNP999 89TcSNP242 90TcSNP1253
91TcSNP1414 92TcSNP154 93TcSNP240