SNP Profiles of GU 144 /C   View Data

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 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
ATACCTACAGAGCTCTCCCTAGTTCTTT
1._GU_144_/C
ATACCTAC________CCCTAG__CT__
2._GC-08-223-6-19
ATACTTACAGAGCTCTCCCCGGTTCCCT
3._GC-08-224-6-20
AA__CCACGGGGCTCCCCCCGGTTCCTT
4._GC-01-073-4-09
AA__CCACGGGGCTCCCCCCGGTTCCTT
5._GC-01-073-4-09
AA__CCACGGGGCTCCCCCCGGTTCCTT
6._GC-01-073-4-09
AA__CCCCGGGGTTCCCCCCGGTTCCTT
7._GC-01-073-4-09
AA__CCCCGGGGTTCCCCCCGGTTCCTT
8._GC-08-224-6-20
AA__CCCCGGGGTTCCCCCCGGTTCCTT
9._GC-01-073-4-09
AA__CCCCGGGGTTCCCCCCGGTTCCTT
10._GC-01-073-4-09
AA__CCCCGGGGTTCCCCCCGGTTCCTT
11._GC-01-073-4-09
AA__CCCCGGGGTTCCCCCCGGTTCCTT
12._GC-01-073-4-09
AA__CCCCGGGGTTCCCCCCGGTTCCTT
13._GC-08-223-6-19
AA__CCCCGGGGTTCCCCCCGGTTCCTT
14._GC-08-223-6-19
AA__CCCCGGGGTTCCCCCCGGTTCCTT
15._GC-08-223-6-19
AA__CCCCGGGGTTCCCCCCGGTTCCTT
16._GC-08-223-6-19
AA__CCCCGGGGTTCCCCCCGGTTCCTT
17._GC-08-223-6-19
AA__CCCCGGGGTTCCCCCCGGTTCCTT
18._GC-08-224-6-20
AA__CCCCGGGGTTCCCCCCGGTTCCTT
19._GC-08-224-6-20
AA__CCCCGGGGTTCCCCCCGGTTCCTT
20._GC-01-073-4-09
AACCCCCCGGGGTTCCCCCCGGTTCCTT
21._GC-01-073-4-09
AA__CCCCGGGGTTCCCCCCGGTTCCTT
22._GC-08-223-6-19
AA__CCCCGGGGTTCCCCCCGGTTCCTT
23._GC-08-224-6-20
AA__CCCCGGGGTTCCCCCCGGTTCCTT
24._RUQ_191
____CCCC____CC__CC____TTCC__
25._GU_144_/C
AA__CCAC________CCCCGG__CC__
26._GU_144_/C
AA__CCAC________CCCCGG__CC__
27._GU_144_/C
AA__CCAC________CCCCGG__CC__
28._RUQ_191
AACCCCCC________CCCCGG__CC__
29._GU_144_/C
AA__CCCC________CCCCGG__CC__
30._GU_144_/C
ATACTTAC________CCCCGG__CC__
31._GU_144_/C
AA__CCCC________CCCCGG__CC__
32._GU_144_/C
AA__CCCC________CCCCGG__CC__
33._GU_144_/C
AA__CCCC________CCCCGG__CC__
34._GU_144_/C
AA__CCCC________CCCCGG__CC__
35._GU_144_/C
AA__CCCC________CCCCGG__CC__
36._GU_144_/C
AA__CCCC________CCCCGG__CC__
37._GU_144_/C
AA__CCCC________CCCCGG__CC__
38._GU_144_/C
AA__CCCC________CCCCGG__CC__
39._GU_144_/C
AA__CCCC________CCCCGG__CC__
40._GU_144_/C
AA__CCCC________CCCCGG__CC__
41._GU_144_/C
AA__CCCC________CCCCGG__CC__
42._GU_144_/C
AA__CCCC________CCCCGG__CC__
43._GU_144_/C
AA__CCCC________CCCCGG__CC__
44._GU_144_/C
AA__CCCC________CCCCGG__CC__
45._GU_144_/C
AA__CCCC________CCCCGG__CC__
46._GU_144_/C
AA__CCCC________CCCCGG__CC__
47._GU_144_/C
AACCCCCC________CCCCGG__CC__
48._RUQ_191
______CC____CC______________
49._GC-01-73-4-9
AACC__ACGGGG__GGGG__GGAAGGAA
50._GC-01-73-4-9
AACC__CCGGGG__GGGG__GGAAGGAA
51._RUQ_191
AACC__CCGGGG__GGGG__GGAAGGAA
52._MITC-000578
AACC__CCGGGG__GGGG__GGAAGGAA
53._MITC-000615
AACC__CCGGGG__GGGG__GGAAGGAA
54._GC-01-73-4-9
AA____CCGGGG__GGGG__GGAAGGAA
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
ATAAAAGGCGCGCGCTAACTGGATAACG
1._GU_144_/C
______GG____CG________ATAA__
2._GC-08-223-6-19
AACC__AACGCCCCCCAATTGGATAACG
3._GC-08-224-6-20
AACC__GGGG__GGTTAATTGGTTAACC
4._GC-01-073-4-09
AACC__GGGGCCGGTTAATTGGTTAACC
5._GC-01-073-4-09
AACC__GGGGCCGGTTAATTGGTTAACC
6._GC-01-073-4-09
AACC__GGGGCCGGCTAA__GGAAAACC
7._GC-01-073-4-09
AACC__GGGGCCGGCTAATTGGAAAACC
8._GC-08-224-6-20
AACC__GGGGCCGGCTAATTGGAAAACC
9._GC-01-073-4-09
AACC__GGGGCCGGCTAATTGGAAAACC
10._GC-01-073-4-09
AACC__GGGGCCGGCTAATTGGAAAACC
11._GC-01-073-4-09
AACC__GGGGCCGGCTAATTGGAAAACC
12._GC-01-073-4-09
AACC__GGGGCCGGCTAATTGGAAAACC
13._GC-08-223-6-19
AACC__GGGGCCGGCTAATTGGAAAACC
14._GC-08-223-6-19
AACC__GGGGCCGGCTAATTGGAAAACC
15._GC-08-223-6-19
AACC__GGGGCCGGCTAATTGGAAAACC
16._GC-08-223-6-19
AACC__GGGGCCGGCTAATTGGAAAACC
17._GC-08-223-6-19
AACC__GGGGCCGGCTAATTGGAAAACC
18._GC-08-224-6-20
AACC__GGGGCCGGCTAATTGGAAAACC
19._GC-08-224-6-20
AACC__GGGGCCGGCTAATTGGAAAACC
20._GC-01-073-4-09
AACC__GGGGCCGGCTAATTGGAAAACC
21._GC-01-073-4-09
AACC__GGGGCCGGCTAATTGGAAAACC
22._GC-08-223-6-19
AACC__GGGGCCGGCTAATTGGAAAACC
23._GC-08-224-6-20
AACC__GGGGCCGGCTAATTGGAAAACC
24._RUQ_191
__________CC________GG__AACC
25._GU_144_/C
______GG____GG________TTAA__
26._GU_144_/C
______GG____GG________TTAA__
27._GU_144_/C
______GG____GG________TTAA__
28._RUQ_191
______GG____GG________AAAA__
29._GU_144_/C
______GG____GG________AAAA__
30._GU_144_/C
______AA____CC________ATAA__
31._GU_144_/C
______GG____GG________AAAA__
32._GU_144_/C
______GG____GG________AAAA__
33._GU_144_/C
______GG____GG________AAAA__
34._GU_144_/C
______GG____GG________AAAA__
35._GU_144_/C
______GG____GG________AAAA__
36._GU_144_/C
______GG____GG________AAAA__
37._GU_144_/C
______GG____GG________AAAA__
38._GU_144_/C
______GG____GG________AAAA__
39._GU_144_/C
______GG____GG________AAAA__
40._GU_144_/C
______GG____GG________AAAA__
41._GU_144_/C
______GG____GG________AAAA__
42._GU_144_/C
______GG____GG________AAAA__
43._GU_144_/C
______GG____GG________AAAA__
44._GU_144_/C
______GG____GG________AAAA__
45._GU_144_/C
______GG____GG________AAAA__
46._GU_144_/C
______GG____GG________AAAA__
47._GU_144_/C
______GG____GG________AAAA__
48._RUQ_191
______GGCT__________________
49._GC-01-73-4-9
TTCCGGGGCC__GGAAGGAAGGTTAAGG
50._GC-01-73-4-9
TTCCGGGGCC__GGAGGGAAGGAAAAGG
51._RUQ_191
TTCCGGGGCC__GGAGGGAAGGAAAAGG
52._MITC-000578
TTCCGGGGCC__GGAGGGAAGGAAAAGG
53._MITC-000615
TTCCGGGGCC__GGAGGGAAGGAAAAGG
54._GC-01-73-4-9
TTCCGGGGCC__GGAGGGAAGGAAAAGG
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
CCATTTGTGGGGCCAGGGGTTTAACCGG
1._GU_144_/C
CCAT______GG__AGGG____AA____
2._GC-08-223-6-19
GGAATTGTGGCCCCGGGTGTTTAACTAG
3._GC-08-224-6-20
GGAATTTTGGCCCCGGTTGGGGGGCCGG
4._GC-01-073-4-09
GGAATTTTGGCCCCGGTTGGGGGGCCGG
5._GC-01-073-4-09
GGAATTTTGGCCCCGGTTGGGGGGCCGG
6._GC-01-073-4-09
GGAATTTTGGCCCCAATTGGGGGGCCAG
7._GC-01-073-4-09
GGAATTTTGGCCCCAATTGGGGGGCCAG
8._GC-08-224-6-20
GGAATTTTGGCCCCAATTGGGGGGCCAG
9._GC-01-073-4-09
GGAATTTTGGCCCCAATTGGGGGGCCAG
10._GC-01-073-4-09
GGAATTTTGGCCCCAATTGGGGGGCCAG
11._GC-01-073-4-09
GGAATTTTGGCCCCAATTGGGGGGCCAG
12._GC-01-073-4-09
GGAATTTTGGCCCCAATTGGGGGGCCAG
13._GC-08-223-6-19
GGAATTTTGGCCCCAATTGGGGGGCCAG
14._GC-08-223-6-19
GGAATTTTGGCCCCAATTGGGGGGCCAG
15._GC-08-223-6-19
GGAATTTTGGCCCCAATTGGGGGGCCAG
16._GC-08-223-6-19
GGAATTTTGGCCCCAATTGGGGGGCCAG
17._GC-08-223-6-19
GGAATTTTGGCCCCAATTGGGGGGCCAG
18._GC-08-224-6-20
GGAATTTTGGCCCCAATTGGGGGGCCAG
19._GC-08-224-6-20
GGAATTTTGGCCCCAATTGGGGGGCCAG
20._GC-01-073-4-09
GGAATTTTGGCCCCAATTGGGGGGCCAG
21._GC-01-073-4-09
GGAATTTTGGCCCCAATTGGGGGGCCAG
22._GC-08-223-6-19
GGAATTTTGGCCCCAATTGGGGGGCCAG
23._GC-08-224-6-20
GGAATTTTGGCCCCAATTGGGGGG__AG
24._RUQ_191
GG______GGCCCCAATT____GGCC__
25._GU_144_/C
GGAA______CC__GGTT____GG____
26._GU_144_/C
GGAA______CC__GGTT____GG____
27._GU_144_/C
GGAA______CC__GGTT____GG____
28._RUQ_191
GGAA______CC__AATT____GG____
29._GU_144_/C
GGAA______CC__AATT____GG____
30._GU_144_/C
GGAA______CC__GGGT____AA____
31._GU_144_/C
GGAA______CC__AATT____GG____
32._GU_144_/C
GGAA______CC__AATT____GG____
33._GU_144_/C
GGAA______CC__AATT____GG____
34._GU_144_/C
GGAA______CC__AATT____GG____
35._GU_144_/C
GGAA______CC__AATT____GG____
36._GU_144_/C
GGAA______CC__AATT____GG____
37._GU_144_/C
GGAA______CC__AATT____GG____
38._GU_144_/C
GGAA______CC__AATT____GG____
39._GU_144_/C
GGAA______CC__AATT____GG____
40._GU_144_/C
GGAA______CC__AATT____GG____
41._GU_144_/C
GGAA______CC__AATT____GG____
42._GU_144_/C
GGAA______CC__AATT____GG____
43._GU_144_/C
GGAA______CC__AATT____GG____
44._GU_144_/C
GGAA______CC__AATT____GG____
45._GU_144_/C
GGAA______CC__AATT____GG____
46._GU_144_/C
GGAA______CC__AATT____GG____
47._GU_144_/C
GGAA______CC__AATT____GG____
48._RUQ_191
GG________CC__AA________CC__
49._GC-01-73-4-9
CCAAAAAAGGCCCCGGAACCCCGGGGGG
50._GC-01-73-4-9
CCAAAAAAGGCCCCAAAACCCCGGGGAG
51._RUQ_191
CCAAAAAAGGCCCCAAAACCCCGGGGAG
52._MITC-000578
CCAAAAAAGGCCCCAAAACCCCGGGGAG
53._MITC-000615
CCAAAAAAGGCCCCAAAACCCCGGGGAG
54._GC-01-73-4-9
CCAAAAAAGGCCCCAAAACCCCGGGGAG
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
CCGGTTTTAGAGAACCAAAGAGGGTTTT
1._GU_144_/C
______TT__________________TT
2._GC-08-223-6-19
CCGGTTCCAAGGAACCCCGGGGGTTT__
3._GC-08-224-6-20
CCGGTTTTAAGGAACCCCGGGGTTTTTT
4._GC-01-073-4-09
CCGGTTTTAAGGAACCCCGGGGTTTTTT
5._GC-01-073-4-09
CCGGTTTTAAGGAACCCCGGGGTTTTTT
6._GC-01-073-4-09
CCGGTTTTAAGGAACCCCGGGGTTTTTT
7._GC-01-073-4-09
CCGGTTTTAAGGAACCCCGGGGTTTTTT
8._GC-08-224-6-20
CCGGTTTTAAGGAACCCCGGGGTTTTTT
9._GC-01-073-4-09
CCGGTTTTAAGGAACCCCGGGGTTTTTT
10._GC-01-073-4-09
CCGGTTTTAAGGAACCCCGGGGTTTTTT
11._GC-01-073-4-09
CCGGTTTTAAGGAACCCCGGGGTTTTTT
12._GC-01-073-4-09
CCGGTTTTAAGGAACCCCGGGGTTTTTT
13._GC-08-223-6-19
CCGGTTTTAAGGAACCCCGGGGTTTTTT
14._GC-08-223-6-19
CCGGTTTTAAGGAACCCCGGGGTTTTTT
15._GC-08-223-6-19
CCGGTTTTAAGGAACCCCGGGGTTTTTT
16._GC-08-223-6-19
CCGGTTTTAAGGAACCCCGGGGTTTTTT
17._GC-08-223-6-19
CCGGTTTTAAGGAACCCCGGGGTTTTTT
18._GC-08-224-6-20
CCGGTTTTAAGGAACCCCGGGGTTTTTT
19._GC-08-224-6-20
CCGGTTTTAAGGAACCCCGGGGTTTTTT
20._GC-01-073-4-09
CCGGTTTTAAGGAACCCCGGGGTTTTTT
21._GC-01-073-4-09
CCGGTTTTAAGGAACCCCGGGGTTTTTT
22._GC-08-223-6-19
CCGGTTTTAAGGAACCCCGGGGTTTTTT
23._GC-08-224-6-20
CCGGTTTTAAGGAACCCCGGGGTTTTTT
24._RUQ_191
__GGTT____GG____________CTTT
25._GU_144_/C
______TT__________________TT
26._GU_144_/C
______TT__________________TT
27._GU_144_/C
______TT__________________TT
28._RUQ_191
______TT__________________TT
29._GU_144_/C
______TT__________________TT
30._GU_144_/C
______CC____________________
31._GU_144_/C
______TT__________________TT
32._GU_144_/C
______TT__________________TT
33._GU_144_/C
______TT__________________TT
34._GU_144_/C
______TT__________________TT
35._GU_144_/C
______TT__________________TT
36._GU_144_/C
______TT__________________TT
37._GU_144_/C
______TT__________________TT
38._GU_144_/C
______TT__________________TT
39._GU_144_/C
______TT__________________TT
40._GU_144_/C
______TT__________________TT
41._GU_144_/C
______TT__________________TT
42._GU_144_/C
______TT__________________TT
43._GU_144_/C
______TT__________________TT
44._GU_144_/C
______TT__________________TT
45._GU_144_/C
______TT__________________TT
46._GU_144_/C
______TT__________________TT
47._GU_144_/C
______TT__________________TT
48._RUQ_191
__________GG________________
49._GC-01-73-4-9
GGCC__AA__GGAAGG__GGGGAAAGAA
50._GC-01-73-4-9
GGCC__AA__GGAAGG__GGGGAAAGAA
51._RUQ_191
GGCC__AA__GGAAGG__GGGGAAAGAA
52._MITC-000578
GGCC__AA__GGAAGG__GGGGAAAGAA
53._MITC-000615
GGCC__AA__GGAAGG__GGGGAAAGAA
54._GC-01-73-4-9
GGCC__AA__GGAAGG__GGGGAAAGAA
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
CCTTGGCCCCTTACCGGGCCAAGGGGAG
1._GU_144_/C
CC____CC__TTACCG__CCAAGGGG__
2._GC-08-223-6-19
TTTTAACCCTCCACCGGGACAATTGGGG
3._GC-08-224-6-20
CCTTGGCCCCCCAAGGGGAAGGGGGGAA
4._GC-01-073-4-09
CCTTGGCCCCCCAAGGGGAAGGGGGGAA
5._GC-01-073-4-09
CCTTGGCCCCCCAAGGGGAAGGGGGGAA
6._GC-01-073-4-09
CCTTGGCCCCCCAAGGGGAAGGGGGGAA
7._GC-01-073-4-09
CCTTGGCCCCCCAAGGGGAAGGGGGGAA
8._GC-08-224-6-20
CCTTGGCCCCCCAAGGGGAAGGGGGGAA
9._GC-01-073-4-09
CCTTGGCCCCCCAAGGGGAAGGGGGGAA
10._GC-01-073-4-09
CCTTGGCCCCCCAAGGGGAAGGGGGGAA
11._GC-01-073-4-09
CCTTGGCCCCCCAAGGGGAAGGGGGGAA
12._GC-01-073-4-09
CCTTGGCCCCCCAAGGGGAAGGGGGGAA
13._GC-08-223-6-19
CCTTGGCCCCCCAAGGGGAAGGGGGGAA
14._GC-08-223-6-19
CCTTGGCCCCCCAAGGGGAAGGGGGGAA
15._GC-08-223-6-19
CCTTGGCCCCCCAAGGGGAAGGGGGGAA
16._GC-08-223-6-19
CCTTGGCCCCCCAAGGGGAAGGGGGGAA
17._GC-08-223-6-19
CCTTGGCCCCCCAAGGGGAAGGGGGGAA
18._GC-08-224-6-20
CCTTGGCCCCCCAAGGGGAAGGGGGGAA
19._GC-08-224-6-20
CCTTGGCCCCCCAAGGGGAAGGGGGGAA
20._GC-01-073-4-09
CCTTGGCCCCCCAAGGGGAAGGGGGGAA
21._GC-01-073-4-09
CCTTGGCCCCCCAAGGGGAAGGGGGGAA
22._GC-08-223-6-19
CC__GGCCCCCCAAGGGGAAGGGGGGAA
23._GC-08-224-6-20
CCTTGGCCCCCCAAGGGGAAGGGGGGAA
24._RUQ_191
__TT__CCCCCCAA__GGAAGGGGGGAA
25._GU_144_/C
CC____CC__CCAAGG__AAGGGGGG__
26._GU_144_/C
CC____CC__CCAAGG__AAGGGGGG__
27._GU_144_/C
CC____CC__CCAAGG__AAGGGGGG__
28._RUQ_191
CC____CC__CCAAGG__AAGGGGGG__
29._GU_144_/C
CC____CC__CCAAGG__AAGGGGGG__
30._GU_144_/C
TT____CC__CCACCG__ACAATTGG__
31._GU_144_/C
CC____CC__CCAAGG__AAGGGGGG__
32._GU_144_/C
CC____CC__CCAAGG__AAGGGGGG__
33._GU_144_/C
CC____CC__CCAAGG__AAGGGGGG__
34._GU_144_/C
CC____CC__CCAAGG__AAGGGGGG__
35._GU_144_/C
CC____CC__CCAAGG__AAGGGGGG__
36._GU_144_/C
CC____CC__CCAAGG__AAGGGGGG__
37._GU_144_/C
CC____CC__CCAAGG__AAGGGGGG__
38._GU_144_/C
CC____CC__CCAAGG__AAGGGGGG__
39._GU_144_/C
CC____CC__CCAAGG__AAGGGGGG__
40._GU_144_/C
CC____CC__CCAAGG__AAGGGGGG__
41._GU_144_/C
CC____CC__CCAAGG__AAGGGGGG__
42._GU_144_/C
CC____CC__CCAAGG__AAGGGGGG__
43._GU_144_/C
CC____CC__CCAAGG__AAGGGGGG__
44._GU_144_/C
CC____CC__CCAAGG__AAGGGGGG__
45._GU_144_/C
CC____CC__CCAAGG__AAGGGGGG__
46._GU_144_/C
CC____CC__CCAAGG__AAGGGGGG__
47._GU_144_/C
CC____CC__CCAAGG__AAGGGGGG__
48._RUQ_191
____GG____________AAGG__GGAA
49._GC-01-73-4-9
GGAAGGGGGGGGAAGGGGAAGGCCCCAA
50._GC-01-73-4-9
GGAAGGGGGGGGAAGGGGAAGGCCCCAA
51._RUQ_191
GGAAGGGGGGGGAAGGGGAAGGCCCCAA
52._MITC-000578
GGAAGGGGGGGGAAGGGGAAGGCCCCAA
53._MITC-000615
GGAAGGGGGGGGAAGGGGAAGGCCCCAA
54._GC-01-73-4-9
GGAAGGGGGGGGAAGGGGAAGGCCCCAA
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
_Input profile
TTCCAACCACAGCCCCAAACCCCCAACC
1._GU_144_/C
____AACC__________ACCC______
2._GC-08-223-6-19
TTCCGGTTCCAGCCAAAACCGGCCATAA
3._GC-08-224-6-20
CCCCGGCCAAAGCCCCGGAACGCCTTAA
4._GC-01-073-4-09
CCCCGGCCAAAGCCCCGGAACGCCTTAA
5._GC-01-073-4-09
CCCCGGCCAAAGCCCCGGAACGCCTTAA
6._GC-01-073-4-09
CCCCGGCCAAAGCCCCGGAAGGCCTTAA
7._GC-01-073-4-09
CCCCGGCCAAAGCCCCGGAAGGCCTTAA
8._GC-08-224-6-20
CCCCGGCCAAAGCCCCGGAAGGCCTTAA
9._GC-01-073-4-09
CCCCGGCCAAAGCCCCGGAAGGCCTTAA
10._GC-01-073-4-09
CCCCGGCCAAAGCCCCGGAAGGCCTTAA
11._GC-01-073-4-09
CCCCGGCCAAAGCCCCGGAAGGCCTTAA
12._GC-01-073-4-09
CCCCGGCCAAAGCCCCGGAAGGCCTTAA
13._GC-08-223-6-19
CCCCGGCCAAAGCCCCGGAAGGCCTTAA
14._GC-08-223-6-19
CCCCGGCCAAAGCCCCGGAAGGCCTTAA
15._GC-08-223-6-19
CCCCGGCCAAAGCCCCGGAAGGCCTTAA
16._GC-08-223-6-19
CCCCGGCCAAAGCCCCGGAAGGCCTTAA
17._GC-08-223-6-19
CCCCGGCCAAAGCCCCGGAAGGCCTTAA
18._GC-08-224-6-20
CCCCGGCCAAAGCCCCGGAAGGCCTTAA
19._GC-08-224-6-20
CCCCGGCCAAAGCCCCGGAAGGCCTTAA
20._GC-01-073-4-09
CCCCGGCCAAAGCCCCGGAAGGCCTTAA
21._GC-01-073-4-09
CCCCGGCCAAAGCCCCGGAAGG__TTAA
22._GC-08-223-6-19
CCCCGGCCAAAGCCCCGGAAGGCCTTAA
23._GC-08-224-6-20
CCCCGGCCAAAGCCCCGGAAGGCCTTAA
24._RUQ_191
__________________AAGG____AA
25._GU_144_/C
____GGCC__________AACG______
26._GU_144_/C
____GGCC__________AACG______
27._GU_144_/C
____GGCC__________AACG______
28._RUQ_191
____AGCC__________AAGG______
29._GU_144_/C
____GGCC__________AAGG______
30._GU_144_/C
____GGTT__________CCGG______
31._GU_144_/C
____GGCC__________AAGG______
32._GU_144_/C
____GGCC__________AAGG______
33._GU_144_/C
____GGCC__________AAGG______
34._GU_144_/C
____GGCC__________AAGG______
35._GU_144_/C
____GGCC__________AAGG______
36._GU_144_/C
____GGCC__________AAGG______
37._GU_144_/C
____GGCC__________AAGG______
38._GU_144_/C
____GGCC__________AAGG______
39._GU_144_/C
____GGCC__________AAGG______
40._GU_144_/C
____GGCC__________AAGG______
41._GU_144_/C
____GGCC__________AAGG______
42._GU_144_/C
____GGCC__________AAGG______
43._GU_144_/C
____GGCC__________AAGG______
44._GU_144_/C
____GGCC__________AAGG______
45._GU_144_/C
____GGCC__________AAGG______
46._GU_144_/C
____GGCC__________AAGG______
47._GU_144_/C
____GGCC__________AAGG______
48._RUQ_191
____AG____________AAGG____AA
49._GC-01-73-4-9
______GGAAAGCCCC__AACGGGTTAA
50._GC-01-73-4-9
______GGAAAGCCCC__AACCGGTTAA
51._RUQ_191
______GGAAAGCCCC__AACCGGTTAA
52._MITC-000578
______GGAAAGCCCC__AACCGGTTAA
53._MITC-000615
______GGAAAGCCCC__AACCGGTTAA
54._GC-01-73-4-9
______GGAAAGCCCC__AACCGGTTAA
 85 86 87 88 89 90 91 92 93 94 95    
_Input profile
TTCCCCCTAGCTTTGTCTTTGGX_XX_XX_X
1._GU_144_/C
TTCCCC__AG__TTGTCT____X_XX_XX_X
2._GC-08-223-6-19
TTTTTTCCAACTCCTTCTAAGGX_XX_XX_X
3._GC-08-224-6-20
CCCTCCCCAGCCCCTTTTAAGGX_XX_XX_X
4._GC-01-073-4-09
CCCTCCCCAGCCCCTTTTAAGGX_XX_XX_X
5._GC-01-073-4-09
CCCTCCCCAGCCCCTTTTAAGGX_XX_XX_X
6._GC-01-073-4-09
CCCCCCCCGGCCCCTTTTAAGGX_XX_XX_X
7._GC-01-073-4-09
CCCCCCCCGGCCCCTTTTAAGGX_XX_XX_X
8._GC-08-224-6-20
CCCCCCCCGGCCCCTTTTAAGGX_XX_XX_X
9._GC-01-073-4-09
CCCCCCCCGGCCCCTTTTAAGGX_XX_XX_X
10._GC-01-073-4-09
CCCCCCCCGGCCCCTTTTAAGGX_XX_XX_X
11._GC-01-073-4-09
CCCCCCCCGGCCCCTTTTAAGGX_XX_XX_X
12._GC-01-073-4-09
CCCCCCCCGGCCCCTTTTAAGGX_XX_XX_X
13._GC-08-223-6-19
CCCCCCCCGGCCCCTTTTAAGGX_XX_XX_X
14._GC-08-223-6-19
CCCCCCCCGGCCCCTTTTAAGGX_XX_XX_X
15._GC-08-223-6-19
CCCCCCCCGGCCCCTTTTAAGGX_XX_XX_X
16._GC-08-223-6-19
CCCCCCCCGGCCCCTTTTAAGGX_XX_XX_X
17._GC-08-223-6-19
CCCCCCCCGGCCCCTTTTAAGGX_XX_XX_X
18._GC-08-224-6-20
CCCCCCCCGGCCCCTTTTAAGGX_XX_XX_X
19._GC-08-224-6-20
CCCCCCCCGGCCCCTTTTAAGGX_XX_XX_X
20._GC-01-073-4-09
CCCCCCCCGGCCCCTTTTAAGGX_XX_XX_X
21._GC-01-073-4-09
CCCCCCCCGGCCCCTTTTAAGGX_XX_XX_X
22._GC-08-223-6-19
CCCCCCCCGGCCCCTTTTAAGGX_XX_XX_X
23._GC-08-224-6-20
CCCCCCCCGGCCCCTTTTAAGGX_XX_XX_X
24._RUQ_191
CC______GGCCCCTT______X_XX_XX_X
25._GU_144_/C
CCCTCC__AG__CCTTTT____X_XX_XX_X
26._GU_144_/C
CCCTCC__AG__CCTTTT____X_XX_XX_X
27._GU_144_/C
CCCTCC__AG__CCTTTT____X_XX_XX_X
28._RUQ_191
CCCCCC__GG__CCTTTT____X_XX_XX_X
29._GU_144_/C
CCCCCC__GG__CCTTTT____X_XX_XX_X
30._GU_144_/C
TTTTTT__AA__CCTTCT____X_XX_XX_X
31._GU_144_/C
CCCCCC__GG__CCTTTT____X_XX_XX_X
32._GU_144_/C
CCCCCC__GG__CCTTTT____X_XX_XX_X
33._GU_144_/C
CCCCCC__GG__CCTTTT____X_XX_XX_X
34._GU_144_/C
CCCCCC__GG__CCTTTT____X_XX_XX_X
35._GU_144_/C
CCCCCC__GG__CCTTTT____X_XX_XX_X
36._GU_144_/C
CCCCCC__GG__CCTTTT____X_XX_XX_X
37._GU_144_/C
CCCCCC__GG__CCTTTT____X_XX_XX_X
38._GU_144_/C
CCCCCC__GG__CCTTTT____X_XX_XX_X
39._GU_144_/C
CCCCCC__GG__CCTTTT____X_XX_XX_X
40._GU_144_/C
CCCCCC__GG__CCTTTT____X_XX_XX_X
41._GU_144_/C
CCCCCC__GG__CCTTTT____X_XX_XX_X
42._GU_144_/C
CCCCCC__GG__CCTTTT____X_XX_XX_X
43._GU_144_/C
CCCCCC__GG__CCTTTT____X_XX_XX_X
44._GU_144_/C
CCCCCC__GG__CCTTTT____X_XX_XX_X
45._GU_144_/C
CCCCCC__GG__CCTTTT____X_XX_XX_X
46._GU_144_/C
CCCCCC__GG__CCTTTT____X_XX_XX_X
47._GU_144_/C
CCCCCC__GG__CCTTTT____X_XX_XX_X
48._RUQ_191
____CC____CC__TT______X_XX_XX_X
49._GC-01-73-4-9
GGAG__GG____GGAAAATTGGX_XX_XX_X
50._GC-01-73-4-9
GGGG__GG____GGAAAATTGGX_XX_XX_X
51._RUQ_191
GGGG__GG____GGAAAATTGGX_XX_XX_X
52._MITC-000578
GGGG__GG____GGAAAATTGGX_XX_XX_X
53._MITC-000615
GGGG__GG____GGAAAATTGGX_XX_XX_X
54._GC-01-73-4-9
GGGG__GG____GGAAAATTGGX_XX_XX_X

Input profile: GU_144_/C GC-08-224-6-20

 
 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

1._GU_144_/C

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8620 5
 Dapeng Zhang, 2016

2._GU_144_/C GC-08-223-6-19

64 %
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP2
 Mars, 2018

3._GU_144_/C GC-08-224-6-20

60.9 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

4._GU_144_/C GC-01-073-4-09

60.8 %
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

5._GU_144_/C GC-01-073-4-09

60.8 %
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

6._GU_144_/C GC-01-073-4-09

59.2 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12 > FP3
 Mars, 2018

7._GU_144_/C GC-01-073-4-09

59.1 %
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

8._GU_144_/C GC-08-224-6-20

59.1 %
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

9._GU_144_/C GC-01-073-4-09

59.1 %
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

10._GU_144_/C GC-01-073-4-09

59.1 %
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5 > FP4
 Mars, 2018

11._GU_144_/C GC-01-073-4-09

59.1 %
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

12._GU_144_/C GC-01-073-4-09

59.1 %
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

13._GU_144_/C GC-08-223-6-19

59.1 %
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

14._GU_144_/C GC-08-223-6-19

59.1 %
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP3
 Mars, 2018

15._GU_144_/C GC-08-223-6-19

59.1 %
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

16._GU_144_/C GC-08-223-6-19

59.1 %
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

17._GU_144_/C GC-08-223-6-19

59.1 %
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

18._GU_144_/C GC-08-224-6-20

59.1 %
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

19._GU_144_/C GC-08-224-6-20

59.1 %
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

20._GU_144_/C GC-01-073-4-09

59 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

21._GU_144_/C GC-01-073-4-09

58.7 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

22._GU_144_/C GC-08-223-6-19

58.7 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

23._GU_144_/C GC-08-224-6-20

58.7 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

24._GU_144_/C RUQ_191

56 %
42 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

25._GU_144_/C

53.8 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8620 7
 Dapeng Zhang, 2016

26._GU_144_/C

53.8 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1409 9
 Dapeng Zhang, 2016

27._GU_144_/C

53.8 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1409 3
 Dapeng Zhang, 2016

28._GU_144_/C RUQ_191

52.5 %
40 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

29._GU_144_/C

51.3 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1409 2
 Dapeng Zhang, 2016

30._GU_144_/C

51.3 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8619 1 > FP
 Dapeng Zhang, 2016

31._GU_144_/C

51.3 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8620 8
 Dapeng Zhang, 2016

32._GU_144_/C

51.3 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8620 3
 Dapeng Zhang, 2016

33._GU_144_/C

51.3 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8620 2
 Dapeng Zhang, 2016

34._GU_144_/C

51.3 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8620 1
 Dapeng Zhang, 2016

35._GU_144_/C

51.3 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8619 3 > FP
 Dapeng Zhang, 2016

36._GU_144_/C

51.3 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8619 10
 Dapeng Zhang, 2016

37._GU_144_/C

51.3 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8619 9
 Dapeng Zhang, 2016

38._GU_144_/C

51.3 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8619 7
 Dapeng Zhang, 2016

39._GU_144_/C

51.3 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8619 5
 Dapeng Zhang, 2016

40._GU_144_/C

51.3 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8619 2
 Dapeng Zhang, 2016

41._GU_144_/C

51.3 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1409 5 > FP
 Dapeng Zhang, 2016

42._GU_144_/C

51.3 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1409 12 > F
 Dapeng Zhang, 2016

43._GU_144_/C

51.3 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1409 1 > FP
 Dapeng Zhang, 2016

44._GU_144_/C

51.3 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1409 13
 Dapeng Zhang, 2016

45._GU_144_/C

51.3 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1409 10
 Dapeng Zhang, 2016

46._GU_144_/C

51.3 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1409 8
 Dapeng Zhang, 2016

47._GU_144_/C

51.3 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1409 6
 Dapeng Zhang, 2016

48._GU_144_/C RUQ_191

45.2 %
21 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 
View Data
GU
0.997

49._GU_144_/C GC-01-73-4-9

32.7 %
81 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 3
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

50._GU_144_/C GC-01-73-4-9

32.1 %
81 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 1 > FP1
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

51._GU_144_/C RUQ_191

32.1 %
81 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

52._GU_144_/C MITC-000578

32.1 %
81 shared markers

 View  View all  Clone  Any
USDA-SHRS, United States of America
 Mars, 2018

53._GU_144_/C MITC-000615

32.1 %
81 shared markers

 View  View all  Clone  Any
USDA-SHRS, United States of America
 Mars, 2018

54._GU_144_/C GC-01-73-4-9

31.9 %
80 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

 

  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP860 18TcSNP1062 19TcSNP836 20TcSNP878
21TcSNP929 22TcSNP413 23TcSNP653 24TcSNP1149 25TcSNP174
26TcSNP32 27TcSNP372 28TcSNP448 29TcSNP872 30TcSNP953
31TcSNP1034 32TcSNP1175 33TcSNP1111 34TcSNP577 35TcSNP90
36TcSNP998 37TcSNP150 38TcSNP28 39TcSNP751 40TcSNP1484
41TcSNP602 42TcSNP561 43TcSNP894 44TcSNP1063 45TcSNP1126
46TcSNP1270 47TcSNP606 48TcSNP329 49TcSNP689 50TcSNP944
51TcSNP1242 52TcSNP1383 53TcSNP547 54TcSNP776 55TcSNP1309
56TcSNP151 57TcSNP1520 58TcSNP799 59TcSNP899 60TcSNP226
61TcSNP1439 62TcSNP1442 63TcSNP193 64TcSNP25 65TcSNP364
66TcSNP144 67TcSNP230 68TcSNP560 69TcSNP723 70TcSNP731
71TcSNP701 72TcSNP1041 73TcSNP645 74TcSNP917 75Tcm003s01336581
76Tcm003s07402719 77Tcm001s00947643 78Tcm006s26664133 79Tcm002s20575712 80TcSNP529
81TcSNP1458 82TcSNP60 83TcSNP430 84TcSNP823 85TcSNP619
86TcSNP994 87TcSNP1144 88TcSNP1156 89TcSNP469 90TcSNP999
91TcSNP242 92TcSNP1253 93TcSNP1414 94TcSNP154 95TcSNP240