SNP Profiles of CATONGO-01   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
AAAATTAAGGGGCCCCCCCCGGTTCCCC
1._GC-08-277-8-49
AAAATTAAGGGGCCCCCCCCGGTTCCCC
2._GC-08-277-8-49
AAAATTAAGGGGCCCCCCCCGGTTCCCC
3._GC-08-109-3-08
AAAATTAAGGGGCCCCCCCCGGTTCCCC
4._GC-08-109-3-08
AAAATTAAGGGGCCCCCCCCGGTTCCCC
5._GC-08-109-3-08
AAAATTAAGGGGCCCCCCCCGGTTCCCC
6._GC-08-277-8-49
AAAATTAAGGGGCCCCCCCCGGTTCCCC
7._GC-08-277-8-49
AAAATTAAGGGGCCCCCCCCGGTTCCCC
8._GC-08-277-8-49
AAAATTAAGGGGCCCCCCCCGGTTCCCC
9._GC-08-277-8-49
AAAATTAAGGGGCCCCCCCCGGTTCCCC
10._GC-08-278-8-50
AAAATTAAGGGGCCCCCCCCGGTTCCCC
11._GC-08-277-8-49
AAAATTAAGGGGCCCCCCCCGGTTCCTT
12._GC-08-278-8-50
AAAATTAAGGGGCCCCCCCCGGTTCCTT
13._GC-08-278-8-50
AAAATTAAGGGGCCCCCCCCGGTTCCTT
14._GC-08-278-8-50
AAAATTAAGGGGCCCCCCCCGGTTCCTT
15._GC-08-278-8-50
AAAATTAAGGGGCCCCCCCCGGTTCCTT
16._GC-08-277-8-49
AAAATTAAGGGGCCCCCCCCGGTTCCTT
17._GC-08-278-8-50
AAAATTAAGGGGCCCCCCCCGGTTCCTT
18._GC-08-109-3-8
AAAA__AAGGGG__GGGG__GGAAGGGG
19._GC-08-277-8-49
AAAA__AAGGGG__GGGG__GGAAGGAA
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
AACCAAGGCCCCTTAATTGGTTAACCGG
1._GC-08-277-8-49
AACCAAGGCCCCTTAATTGGTTAACCGG
2._GC-08-277-8-49
AACCAAGGCCCCTTAATTGGTTAACCGG
3._GC-08-109-3-08
AACCAAGGCCCCTTAATTGGTTAACCGG
4._GC-08-109-3-08
AACCAAGGCCCCTTAATTGGTTAACCGG
5._GC-08-109-3-08
AACCAAGGCCCCTTAATTGGTTAACCGG
6._GC-08-277-8-49
AACCAAGGCCCCTTAATTGGTTAACCGG
7._GC-08-277-8-49
AACCAAGGCCCCTTAATTGGTTAACCGG
8._GC-08-277-8-49
AACCAAGGCCCCTTAATTGGTTAACCGG
9._GC-08-277-8-49
AACCAA__CCCCTTAATTGGTTAACCGG
10._GC-08-278-8-50
AACCAAGGCCCCTTAATT__TTAACCGG
11._GC-08-277-8-49
AACCAAGGCCCCCTAATTGGTTAACCGG
12._GC-08-278-8-50
AACCAAGGCCCCCTAATTGGTTAACCGG
13._GC-08-278-8-50
AACCAAGGCCCCCTAATTGGTTAACCGG
14._GC-08-278-8-50
AACCAAGGCCCCCTAATTGGTTAACCGG
15._GC-08-278-8-50
AACCAAGGCCCCCTAATTGGTTAACCGG
16._GC-08-277-8-49
AACCAAGGCCCCCTAATTGGTTAACCGG
17._GC-08-278-8-50
AACCAAGGCCCCCTAATTGGTTAACCGG
18._GC-08-109-3-8
TTCCAACC__CCAAGGAAGGTTAAGGCC
19._GC-08-277-8-49
TTCCAACC__CCAGGGAAGGTTAAGGCC
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
AATTGGAACCCCGGTTGGTTGGTTAACC
1._GC-08-277-8-49
AATTGGAACCCCGGTTGGTTGGTTAACC
2._GC-08-277-8-49
AATTGGAACCCCGGTTGGTTGGTTAACC
3._GC-08-109-3-08
AATTGGAACCCCGGTTGGTTGGTTAACC
4._GC-08-109-3-08
AATTGGAACCCCGGTTGGTTGGTTAACC
5._GC-08-109-3-08
AATTGGAACCCCGGTTGGTTGGTTAACC
6._GC-08-277-8-49
__TTGGAACCCCGGTTGGTTGGTTAACC
7._GC-08-277-8-49
AATTGGAACCCCGGTTGGTTGGTTAACC
8._GC-08-277-8-49
AATTGGAACCCCGGTTGGTTGGTTAACC
9._GC-08-277-8-49
AATTGGAACCCCGGTTGGTTGGTTAACC
10._GC-08-278-8-50
AATTGGAACCCCGGTTGGTTGGTTAACC
11._GC-08-277-8-49
AATTTTAACCCCGGTTGGTTGGTTAACC
12._GC-08-278-8-50
AATTTTAACCCCGGTTGGTTGGTTAACC
13._GC-08-278-8-50
AATTTTAACCCCGGTTGGTTGGTTAACC
14._GC-08-278-8-50
AATTTTAACCCCGGTTGGTTGGTTAACC
15._GC-08-278-8-50
AATTTTAACCCCGGTTGGTTGGTTAACC
16._GC-08-277-8-49
AATTTTAACCCCGGTTGGTTGGTTAACC
17._GC-08-278-8-50
AATTTTAACCCCGGTTGGTTGGTTAACC
18._GC-08-109-3-8
AAAACCAACCCCGGAA__AAGGAAAAGG
19._GC-08-277-8-49
AAAAAAAACCCCGGAA__AAGGAAAAGG
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
GGTTCCAAGGAACCCCGGTTTTCCTTTT
1._GC-08-277-8-49
GGTTCCAAGGAACCCCGGTTTTCCTTTT
2._GC-08-277-8-49
GGTTCCAAGGAACCCCGGTTTTCCTTTT
3._GC-08-109-3-08
GGTTCCAAGGAACCCCGGTTTTCCTTTT
4._GC-08-109-3-08
GGTTCCAAGGAACCCCGGTTTTCCTTTT
5._GC-08-109-3-08
GGTTCCAAGGAACCCCGGTTTTCCTTTT
6._GC-08-277-8-49
GGTTCCAAGGAACCCCGGTTTTCCTTTT
7._GC-08-277-8-49
GGTTCCAAGGAACCCCGGTTTTCCTTTT
8._GC-08-277-8-49
GGTTCCAAGGAACCCCGGTTTTCCTTTT
9._GC-08-277-8-49
GGTTCCAAGGAACCCCGGTTTTCCTTTT
10._GC-08-278-8-50
GGTTCCAAGGAACCCCGGTTTTCCTTTT
11._GC-08-277-8-49
GGTTCCAAGGAACCCCGGTTTTCCTTTT
12._GC-08-278-8-50
GGTTCCAAGGAACCCCGGTTTTCCTTTT
13._GC-08-278-8-50
GGTTCCAAGGAACCCCGGTTTTCCTTTT
14._GC-08-278-8-50
GGTTCCAAGGAACCCCGGTTTTCCTTTT
15._GC-08-278-8-50
GGTTCCAAGGAACCCCGGTTTTCCTTTT
16._GC-08-277-8-49
GGTTCCAAGGAACCCCGGTTTTCCTTTT
17._GC-08-278-8-50
GGTTCCAAGGAACCCCGG__TTCCTTTT
18._GC-08-109-3-8
CC__GG__GGAAGG__GGAAAAGGAAAA
19._GC-08-277-8-49
CC__GG__GGAAGG__GGAAAAGGAAAA
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
AACCTTCCAAGGGGAAAATTGGGGTTCC
1._GC-08-277-8-49
AACCTTCCAAGGGGAAAATTGGGGTTCC
2._GC-08-277-8-49
AACCTTCCAAGGGGAAAATTGGGGTTCC
3._GC-08-109-3-08
AACCTTCCAAGGGGAAAATTGGGGTTCC
4._GC-08-109-3-08
AACCTTCCAAGGGGAAAATTGGGGTTCC
5._GC-08-109-3-08
AACCTTCCAAGGGGAAAATTGGGGTTCC
6._GC-08-277-8-49
AACCTTCCAAGGGGAAAATTGGGGTTCC
7._GC-08-277-8-49
__CCTTCCAAGGGGAAAATTGGGGTTCC
8._GC-08-277-8-49
AACCTTCCAAGGGGAAAATTGGGGTTCC
9._GC-08-277-8-49
AACCTTCCAAGGGGAAAATTGGGGTTCC
10._GC-08-278-8-50
AACCTTCCAAGGGGAAAATTGGGGTTCC
11._GC-08-277-8-49
AACCTTTTAAGGGGACAATTGGGGTTCC
12._GC-08-278-8-50
AACCTTTTAAGGGGACAATTGGGGTTCC
13._GC-08-278-8-50
AACCTTTTAAGGGGACAATTGGGGTTCC
14._GC-08-278-8-50
AACCTTTTAAGGGGACAATTGGGGTTCC
15._GC-08-278-8-50
AACCTTTTAAGGGGACAATTGGGGTTCC
16._GC-08-277-8-49
AACCTTTTAAGGGGACAATTGGGGTTCC
17._GC-08-278-8-50
AACCTTTTAAGGGGACAATTGGGGTTCC
18._GC-08-109-3-8
AAGGAAGGAAGGGGAAAAAACCGG____
19._GC-08-277-8-49
AAGGAAAAAAGGGGACAAAACCGG____
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
_Input profile
GGAAAACCAAAACCGGCCTTAATTTTTT
1._GC-08-277-8-49
GGAAAACCAAAACCGGCCTTAATTTTTT
2._GC-08-277-8-49
GGAAAACCAAAACCGGCCTTAATTTTTT
3._GC-08-109-3-08
GGAAAACCAAAACCGGCCTTAATTTTTT
4._GC-08-109-3-08
GGAAAACCAAAACCGGCCTTAATTTTTT
5._GC-08-109-3-08
GGAAAACCAAAACCGGCCTTAATTTTTT
6._GC-08-277-8-49
GGAAAACCAAAACCGGCCTTAATTTTTT
7._GC-08-277-8-49
GGAAAACCAAAACCGGCCTTAATTTTTT
8._GC-08-277-8-49
GGAAAACCAAAA__GGCCTTAATTTTTT
9._GC-08-277-8-49
GGAAAACCAAAACCGGCCTTAATTTTTT
10._GC-08-278-8-50
GGAAAACCAAAA__GGCCTTAATTTTTT
11._GC-08-277-8-49
GGAAAACCAAAACCGGCCTTAATTTTTT
12._GC-08-278-8-50
GGAAAACCAAAACCGGCCTTAATTTTTT
13._GC-08-278-8-50
GGAAAACCAAAACCGGCCTTAATTTTTT
14._GC-08-278-8-50
GGAAAACCAAAACCGGCCTTAATTTTTT
15._GC-08-278-8-50
GGAAAACCAAAACCGGCCTTAATTTTTT
16._GC-08-277-8-49
GGAAAACCAAAACCGGCCTTAATTTTTT
17._GC-08-278-8-50
GGAAAACCAAAACCGGCCTTAATTTTTT
18._GC-08-109-3-8
__AAAACCAA__CCCCGGTTAAAAAA__
19._GC-08-277-8-49
__AAAACCAA__CCCCGGTTAAAAAA__
 85 86 87 88 89 90 91        
_Input profile
CCAATTCCTTAAGGX_XX_XX_XX_XX_XX_XX_X
1._GC-08-277-8-49
CCAATTCCTTAAGGX_XX_XX_XX_XX_XX_XX_X
2._GC-08-277-8-49
CCAATTCCTTAAGGX_XX_XX_XX_XX_XX_XX_X
3._GC-08-109-3-08
CCAATTCCTTAAGGX_XX_XX_XX_XX_XX_XX_X
4._GC-08-109-3-08
CCAATTCCTTAAGGX_XX_XX_XX_XX_XX_XX_X
5._GC-08-109-3-08
CCAATTCCTTAAGGX_XX_XX_XX_XX_XX_XX_X
6._GC-08-277-8-49
CCAATTCCTTAAGGX_XX_XX_XX_XX_XX_XX_X
7._GC-08-277-8-49
CCAATTCCTTAAGGX_XX_XX_XX_XX_XX_XX_X
8._GC-08-277-8-49
CCAATTCCTTAAGGX_XX_XX_XX_XX_XX_XX_X
9._GC-08-277-8-49
CCAATTCCTTAAGGX_XX_XX_XX_XX_XX_XX_X
10._GC-08-278-8-50
CCAATTCCTTAAGGX_XX_XX_XX_XX_XX_XX_X
11._GC-08-277-8-49
TTAATTCCTTAAGGX_XX_XX_XX_XX_XX_XX_X
12._GC-08-278-8-50
TTAATTCCTTAAGGX_XX_XX_XX_XX_XX_XX_X
13._GC-08-278-8-50
TTAATTCCTTAAGGX_XX_XX_XX_XX_XX_XX_X
14._GC-08-278-8-50
TTAATTCCTTAAGGX_XX_XX_XX_XX_XX_XX_X
15._GC-08-278-8-50
TTAATTCCTTAAGGX_XX_XX_XX_XX_XX_XX_X
16._GC-08-277-8-49
TTAATTCCTTAAGGX_XX_XX_XX_XX_XX_XX_X
17._GC-08-278-8-50
TTAATTCCTTAAGGX_XX_XX_XX_XX_XX_XX_X
18._GC-08-109-3-8
GG____GGAATTGGX_XX_XX_XX_XX_XX_XX_X
19._GC-08-277-8-49
AA____GGAATTGGX_XX_XX_XX_XX_XX_XX_X

Input profile: CATONGO_1 GC-08-277-8-49

 
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Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

1._CATONGO_1 GC-08-277-8-49

identical
91 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

2._CATONGO_1 GC-08-277-8-49

identical
91 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9 > FP4
 Mars, 2018

3._CATONGO_1 GC-08-109-3-08

identical
91 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

4._CATONGO_1 GC-08-109-3-08

identical
91 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP2
 Mars, 2018

5._CATONGO_1 GC-08-109-3-08

identical
91 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

6._CATONGO_1 GC-08-277-8-49

identical
90 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

7._CATONGO_1 GC-08-277-8-49

identical
90 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

8._CATONGO_1 GC-08-277-8-49

identical
90 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4 > FP2
 Mars, 2018

9._CATONGO_1 GC-08-277-8-49

identical
90 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP1
 Mars, 2018

10._CATONGO_1 GC-08-278-8-50

identical
89 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

11._CATONGO_1 GC-08-277-8-49

94.5 %
91 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

12._CATONGO_1 GC-08-278-8-50

94.5 %
91 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

13._CATONGO_1 GC-08-278-8-50

94.5 %
91 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

14._CATONGO_1 GC-08-278-8-50

94.5 %
91 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

15._CATONGO_1 GC-08-278-8-50

94.5 %
91 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

16._CATONGO_1 GC-08-277-8-49

94.5 %
91 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8 > FP3
 Mars, 2018

17._CATONGO_1 GC-08-278-8-50

94.4 %
90 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

18._CATONGO_1 GC-08-109-3-8

48.7 %
76 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

19._CATONGO_1 GC-08-277-8-49

48 %
76 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 7
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

 

  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP1062 18TcSNP836 19TcSNP878 20TcSNP929
21TcSNP413 22TcSNP653 23TcSNP1149 24TcSNP174 25TcSNP32
26TcSNP372 27TcSNP448 28TcSNP872 29TcSNP953 30TcSNP1034
31TcSNP1175 32TcSNP1111 33TcSNP577 34TcSNP90 35TcSNP998
36TcSNP150 37TcSNP28 38TcSNP751 39TcSNP1484 40TcSNP602
41TcSNP561 42TcSNP894 43TcSNP1063 44TcSNP1126 45TcSNP1270
46TcSNP606 47TcSNP329 48TcSNP689 49TcSNP944 50TcSNP1242
51TcSNP547 52TcSNP776 53TcSNP1309 54TcSNP151 55TcSNP1520
56TcSNP799 57TcSNP899 58TcSNP226 59TcSNP1439 60TcSNP1442
61TcSNP193 62TcSNP25 63TcSNP364 64TcSNP144 65TcSNP230
66TcSNP560 67TcSNP723 68TcSNP731 69TcSNP701 70TcSNP1041
71TcSNP645 72Tcm003s01336581 73Tcm003s07402719 74Tcm001s00947643 75Tcm006s26664133
76Tcm002s20575712 77TcSNP529 78TcSNP1458 79TcSNP60 80TcSNP430
81TcSNP823 82TcSNP619 83TcSNP994 84TcSNP1144 85TcSNP1156
86TcSNP469 87TcSNP999 88TcSNP242 89TcSNP1414 90TcSNP154
91TcSNP240