SNP Profiles matching GU 125 /C

 Show/Hide Profiles

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
AATTCGGGAATTGGTTTTAAGGCCCTGG
1._RUQ_190
AATTCGGGAATTGGTTTTAAGGCCTTGG
2._RUQ_191
AATTGGGGAATTGGTTTTAAGGCCCTGG
3._RUQ_1370
AATTCCGGAGTTGGTT__AAGGCCTTGG
4._RUQ_890
AATTCGGGAATTGGTT__AAGGCCTTGG
5._RUQ_187
AATTGGGGAATTGGTTTTAAGGCCTTGG
6._RUQ_222
AATTCCGGAGTTGGTTTTAAGGCCTTGG
7._RUQ_203
AATTGGGGAATTGGTTTTAAGGCCTTGG
8._RUQ_813
AATTCCGGAGTTGGTT__AAGGCCTTGG
9._RUQ_228B
AATTGGGGAATTGGTT__AAGGCCTTGG
10._RUQ_1545
AATTCCGGAATTGGTTTTAAGGCCCTGG
11._RUQ_200
AATTGGGGAATTGGTT__AAGTCCTTGG
12._RUQ_200B
AATTGGGGAATTGGTTTTAAGTCCTTGG
13._RUQ_771
AATTCCGGAGTTGGTT__AAGGCCCTGG
14._RUQ_230
AATTCGGGAATTGGTTTTAATTCCTTGG
15._RUQ_231
AATTCCGGAGTTGGTTTTAAGGCCTTGG
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
CCAACCCCAGCCGGGGCTAAAATTTTAA
1._RUQ_190
CCAACCCCGGCCGGGGCCAAAATTTTAA
2._RUQ_191
CTAACTCCAACCGGGGCTAAAATTCTAA
3._RUQ_1370
CCAACCCCGGCCGGGGCTAAAATTTTAA
4._RUQ_890
CCAACCCCAGCCGGGGCCAAAATTTTAA
5._RUQ_187
CCAACCCCAACCGGGGCCAAAATTCCAA
6._RUQ_222
CCAACCCCGGCCGGGGCTAAAATTTTAA
7._RUQ_203
CCAACCCCAACCGGGGCCAAAATTTTAA
8._RUQ_813
CCAACCCCAGCCGGGGCCAAAATTTTAA
9._RUQ_228B
CCAACCCCAACCGGGGCCAAAATTTTAA
10._RUQ_1545
CCAATTCCGGCCGGGGCCAAAATTTTAA
11._RUQ_200
CTAACCCCAACCGGGGCCAAAATTTTAA
12._RUQ_200B
CTAACCCCAACCGGGGCCAAAATTTTAA
13._RUQ_771
CCAACTCCAGCCGGGGCCAAAATTTTAA
14._RUQ_230
CCAACTCCGGCCGGGGCCAAAATTCTAA
15._RUQ_231
CCAACTCCGGCCGGGGCCAAAATTCTAA
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
GGCCCCAGCCGGCTCCACATCCAGAACC
1._RUQ_190
GGCCCCAACCAGCTCCACATCCAGAACC
2._RUQ_191
GGCCCCAGCCGGCTCCCCATCCAAAACC
3._RUQ_1370
GGCCCCAACCGGTTCCACTTCCAGAACC
4._RUQ_890
GGCCCCAACCAACCCCAAAACCAGAACC
5._RUQ_187
GGCCCCAACCGGCTCCCCATCCAGAACC
6._RUQ_222
GGCCCCAACCGGTTCCAATTCCAGAACC
7._RUQ_203
GGCCCCAACCGGCTCCCCATCCAAAACC
8._RUQ_813
GGCCCCAACCAGCTCCCCATCCAGAACT
9._RUQ_228B
GGCCCCAACCGGCTCCCCATCCAAAACC
10._RUQ_1545
GGCCCCAGCCAACCCCCCAACCAGAACC
11._RUQ_200
GGCCCCAACCAGCTCCACATCCAGAACT
12._RUQ_200B
GGCC__AACCAGCTCCACATCCAGAACT
13._RUQ_771
GGCCCCAGCCAGTTCCACTTCCAGAACC
14._RUQ_230
GGCCCCAACCGGCTCCACATCCAAAACT
15._RUQ_231
GGCCCCAACCGGTTCCCCTTCCAGAACC
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
AACTAAGGAACCGGGGGGCCAAAATTGG
1._RUQ_190
ACCCAAGGAACCGGGGGGCCAAAATTGG
2._RUQ_191
AACTAAGGAACCGGGGGGCCAAAATTGG
3._RUQ_1370
AACTAAGGAACCGGGGGGCCAAAATTGG
4._RUQ_890
AACTAAGGAACCGGGGGGCCAAAATTGG
5._RUQ_187
ACTTAAGGAACCGGGGGGCCAAAATTGG
6._RUQ_222
AATTAAGGAACCGGGGGGCCAAAATTGG
7._RUQ_203
ACTTAAGGAACCGGGGGGCCAAAATTGG
8._RUQ_813
CCCTAAGGAACCGGGGGGCCAAAATTGG
9._RUQ_228B
ACTTAAGGAACCGGGGGGCCAAAATTGG
10._RUQ_1545
AATTAAGGAACCGGGGGGCCAAAATTGG
11._RUQ_200
ACCTAAGGAACCGGGGGGCCAAAATTGG
12._RUQ_200B
ACCTAAGGAACCGGGGGGCCAAAATTGG
13._RUQ_771
CCTTAAGGAACCGGGGGGCCAAAATTGG
14._RUQ_230
ACCTAAGGAACCGGGGGGCCAAAATTGG
15._RUQ_231
AACTAAGGAACCGGGGGGCCAAAATTGG
 57 58 59 60           
_Input profile
CCTTCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
1._RUQ_190
CCTTCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
2._RUQ_191
CCTTCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
3._RUQ_1370
CCTTCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
4._RUQ_890
CCTTCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
5._RUQ_187
CCTTCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
6._RUQ_222
CCTTACTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
7._RUQ_203
CCTTACTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
8._RUQ_813
CCTTCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
9._RUQ_228B
CCTTACTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
10._RUQ_1545
CCTTCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
11._RUQ_200
CCTTACTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
12._RUQ_200B
CCTTACTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
13._RUQ_771
CCTTACTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
14._RUQ_230
CCTTACTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
15._RUQ_231
CCTTACTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X

Input profile: GU_125_/C RUQ_188

 
 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 
View Data
GU
0.998

1._GU_133_/C RUQ_190

94.2 %
60 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 
View Data
GU
0.998

2._GU_144_/C RUQ_191

94.2 %
60 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 
View Data
GU
0.997

3._GU_261_/P RUQ_1370

94.1 %
59 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 
View Data
GU
0.997

4._GU_265_/P RUQ_890

93.2 %
59 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 
View Data
GU
0.998

5._GU_123_/V RUQ_187

91.7 %
60 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 
View Data
GU
0.998

6._GU_147_/H RUQ_222

91.7 %
60 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 
View Data
GU
0.997

7._GU_259_/C RUQ_203

91.7 %
60 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 
View Data
GU
0.998

8._GU_114_/P RUQ_813

91.5 %
59 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 
View Data
GU
0.997

9._GU_249_/H RUQ_228B

91.5 %
59 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 
View Data
GU
0.998

10._GU_263_/V RUQ_1545

90.8 %
60 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 
View Data
GU
0.997

11._GU_221_/C RUQ_200

90.7 %
59 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

12._GU_221_/C RUQ_200B

90.7 %
59 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 
View Data
GU
0.997

13._GU_277_/G RUQ_771

90.7 %
59 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 
View Data
GU
0.998

14._GU_296_/H RUQ_230

90 %
60 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 
View Data
GU
0.993

15._GU_341_/H RUQ_231

90 %
60 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 
View Data
GU
0.998

 

  Key to SNP Markers

1TcSNP1527 2TcSNP1524 3TcSNP1458 4TcSNP1404 5TcSNP1401
6TcSNP1293 7TcSNP1275 8TcSNP1253 9TcSNP1237 10TcSNP1230
11TcSNP1205 12TcSNP1144 13TcSNP1112 14TcSNP1062 15TcSNP1053
16TcSNP1019 17TcSNP1010 18TcSNP999 19TcSNP998 20TcSNP945
21TcSNP899 22TcSNP872 23TcSNP836 24TcSNP835 25TcSNP823
26TcSNP800 27TcSNP739 28TcSNP731 29TcSNP723 30TcSNP702
31TcSNP660 32TcSNP645 33TcSNP644 34TcSNP642 35TcSNP640
36TcSNP602 37TcSNP591 38TcSNP589 39TcSNP577 40TcSNP546
41TcSNP529 42TcSNP522 43TcSNP519 44TcSNP421 45TcSNP363
46TcSNP329 47TcSNP305 48TcSNP290 49TcSNP230 50TcSNP194
51TcSNP189 52TcSNP176 53TcSNP144 54TcSNP143 55TcSNP131
56TcSNP52 57TcSNP49 58TcSNP33 59TcSNP19 60TcSNP13