SNP Profiles matching GU 221 /C

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	AA	TT	GG	GG	AA	TT	GG	TT	AA	GT	CC	TT	GG	CT
1._RUQ_200B	AA	TT	GG	GG	AA	TT	GG	TT	AA	GT	CC	TT	GG	CT
2._RUQ_228B	AA	TT	GG	GG	AA	TT	GG	TT	AA	GG	CC	TT	GG	CC
3._RUQ_203	AA	TT	GG	GG	AA	TT	GG	TT	AA	GG	CC	TT	GG	CC
4._RUQ_190	AA	TT	CG	GG	AA	TT	GG	TT	AA	GG	CC	TT	GG	CC
5._RUQ_813	AA	TT	CC	GG	AG	TT	GG	TT	AA	GG	CC	TT	GG	CC
6._RUQ_187	AA	TT	GG	GG	AA	TT	GG	TT	AA	GG	CC	TT	GG	CC
7._RUQ_768	AA	TT	GG	GG	AA	TT	GG	TT	AA	TT	CC	CT	GG	TT
8._RUQ_1070	AA	TT	GG	GG	AA	TT	GG	TT	AA	TT	CC	TT	GG	CT
9._RUQ_230	AA	TT	CG	GG	AA	TT	GG	TT	AA	TT	CC	TT	GG	CC
10._RUQ_195	AA	TT	GG	GG	AA	__	GG	TT	AA	TT	CC	TT	GG	__
11._RUQ_815	AA	TT	GG	GG	AA	TT	GG	TT	AA	GG	CC	TT	GG	CT
12._RUQ_814	AA	TT	GG	GG	AA	TT	GG	TT	AA	TT	CC	TT	GG	CT
13._RUQ_1068	AA	TT	GG	GG	AA	TT	GG	TT	AA	__	CC	TT	GG	CC
14._RUQ_188	AA	TT	CG	GG	AA	TT	GG	TT	AA	GG	CC	CT	GG	CC
15._RUQ_1069	AA	TT	GG	GG	AA	TT	GG	TT	AA	GG	CC	TT	GG	TT
16._RUQ_225	AA	TT	GG	GG	AA	TT	GG	TT	AA	TT	CC	TT	GG	CC
17._RUQ_890	AA	TT	CG	GG	AA	TT	GG	TT	AA	GG	CC	TT	GG	CC

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AA	CC	CC	AA	CC	GG	GG	CC	AA	AA	TT	TT	AA	GG
1._RUQ_200B	AA	CC	CC	AA	CC	GG	GG	CC	AA	AA	TT	TT	AA	GG
2._RUQ_228B	AA	CC	CC	AA	CC	GG	GG	CC	AA	AA	TT	TT	AA	GG
3._RUQ_203	AA	CC	CC	AA	CC	GG	GG	CC	AA	AA	TT	TT	AA	GG
4._RUQ_190	AA	CC	CC	GG	CC	GG	GG	CC	AA	AA	TT	TT	AA	GG
5._RUQ_813	AA	CC	CC	AG	CC	GG	GG	CC	AA	AA	TT	TT	AA	GG
6._RUQ_187	AA	CC	CC	AA	CC	GG	GG	CC	AA	AA	TT	CC	AA	GG
7._RUQ_768	AA	CT	CC	AA	CC	GG	GG	CC	AA	AA	TT	CT	AA	GG
8._RUQ_1070	AA	CC	CC	GG	CC	GG	GG	CC	AA	AA	TT	TT	AA	GG
9._RUQ_230	AA	CT	CC	GG	CC	GG	GG	CC	AA	AA	TT	CT	AA	GG
10._RUQ_195	AA	CC	CC	AA	CC	GG	GG	CC	AA	AA	TT	CT	AA	GG
11._RUQ_815	AA	CT	CC	AA	CC	GG	GG	CT	AA	AA	TT	CT	AA	GG
12._RUQ_814	AA	CC	CC	GG	CC	GG	GG	CC	AA	AA	TT	CT	AA	GG
13._RUQ_1068	AA	__	CC	__	CC	GG	GG	CC	AA	AA	TT	CT	AA	GG
14._RUQ_188	AA	CC	CC	AG	CC	GG	GG	CT	AA	AA	TT	TT	AA	GG
15._RUQ_1069	AA	CC	CC	AA	CC	GG	GG	CC	AA	AA	TT	CT	AA	GG
16._RUQ_225	AA	CC	CC	GG	CC	GG	GG	CC	AA	AA	TT	TT	AA	GG
17._RUQ_890	AA	CC	CC	AG	CC	GG	GG	CC	AA	AA	TT	TT	AA	GG

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	CC	CC	AA	CC	AG	CT	CC	AC	AT	CC	AG	AA	CT	AC
1._RUQ_200B	CC	__	AA	CC	AG	CT	CC	AC	AT	CC	AG	AA	CT	AC
2._RUQ_228B	CC	CC	AA	CC	GG	CT	CC	CC	AT	CC	AA	AA	CC	AC
3._RUQ_203	CC	CC	AA	CC	GG	CT	CC	CC	AT	CC	AA	AA	CC	AC
4._RUQ_190	CC	CC	AA	CC	AG	CT	CC	AC	AT	CC	AG	AA	CC	AC
5._RUQ_813	CC	CC	AA	CC	AG	CT	CC	CC	AT	CC	AG	AA	CT	CC
6._RUQ_187	CC	CC	AA	CC	GG	CT	CC	CC	AT	CC	AG	AA	CC	AC
7._RUQ_768	CC	CC	AG	CC	AG	CT	CC	CC	AT	CC	AG	AA	CT	CC
8._RUQ_1070	CC	CC	AA	CC	AG	CT	CC	CC	AT	CC	AA	AA	CC	AC
9._RUQ_230	CC	CC	AA	CC	GG	CT	CC	AC	AT	CC	AA	AA	CT	AC
10._RUQ_195	CC	CC	AA	CC	GG	CC	CC	CC	AA	CC	AA	__	CT	CC
11._RUQ_815	CC	CC	AA	CC	AA	CT	CC	CC	AT	CC	AA	AA	CC	CC
12._RUQ_814	CC	CC	AA	CC	AG	TT	CC	AA	TT	CC	AA	AA	CC	AC
13._RUQ_1068	CC	CC	AA	CC	GG	CC	CC	CC	AA	CC	AG	AA	TT	CC
14._RUQ_188	CC	CC	AG	CC	GG	CT	CC	AC	AT	CC	AG	AA	CC	AA
15._RUQ_1069	CC	CC	AA	CC	AG	TT	CC	AA	TT	CC	AA	AA	CC	AA
16._RUQ_225	CC	CC	AA	CC	AG	TT	CC	CC	TT	CC	AA	AA	CC	AC
17._RUQ_890	CC	CC	AA	CC	AA	CC	CC	AA	AA	CC	AG	AA	CC	AA

	43	44	45	46	47	48	49	50	51	52	53	54	55	56
_Input profile	CT	AA	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG	CC
1._RUQ_200B	CT	AA	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG	CC
2._RUQ_228B	TT	AA	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG	CC
3._RUQ_203	TT	AA	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG	CC
4._RUQ_190	CC	AA	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG	CC
5._RUQ_813	CT	AA	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG	CC
6._RUQ_187	TT	AA	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG	CC
7._RUQ_768	TT	AA	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG	CC
8._RUQ_1070	TT	AA	AG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG	CC
9._RUQ_230	CT	AA	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG	CC
10._RUQ_195	CT	AA	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG	CC
11._RUQ_815	TT	AA	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG	CC
12._RUQ_814	CT	AA	GG	AA	CC	GG	GG	GG	CC	__	AA	TT	GG	CC
13._RUQ_1068	TT	__	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG	CC
14._RUQ_188	CT	AA	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG	CC
15._RUQ_1069	TT	AA	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG	CC
16._RUQ_225	CC	AA	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG	CC
17._RUQ_890	CT	AA	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG	CC

	57	58	59
_Input profile	TT	AC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
1._RUQ_200B	TT	AC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
2._RUQ_228B	TT	AC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
3._RUQ_203	TT	AC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
4._RUQ_190	TT	CC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
5._RUQ_813	TT	CC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
6._RUQ_187	TT	CC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
7._RUQ_768	TT	AC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
8._RUQ_1070	TT	AA	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
9._RUQ_230	TT	AC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
10._RUQ_195	TT	AA	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
11._RUQ_815	TT	AC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
12._RUQ_814	TT	CC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
13._RUQ_1068	TT	CC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
14._RUQ_188	TT	CC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
15._RUQ_1069	TT	AA	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
16._RUQ_225	TT	CC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
17._RUQ_890	TT	CC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X

Input profile: GU_221_/C RUQ_200

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

1._GU_221_/C RUQ_200B

identical
58 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.997

2._GU_249_/H RUQ_228B

94.1 %
59 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.998

3._GU_259_/C RUQ_203

94.1 %
59 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.998

4._GU_133_/C RUQ_190

93.2 %
59 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.998

5._GU_114_/P RUQ_813

92.4 %
59 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.997

6._GU_123_/V RUQ_187

92.4 %
59 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.998

7._GU_219_/F RUQ_768

92.4 %
59 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.998

8._GU_226_/V RUQ_1070

92.4 %
59 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.998

9._GU_296_/H RUQ_230

92.4 %
59 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.993

10._GU_171_/C RUQ_195

92 %
56 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.996

11._GU_310_/P RUQ_815

91.5 %
59 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.998

12._GU_243_/H RUQ_814

91.4 %
58 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.997

13._GU_123_/V RUQ_1068

90.9 %
55 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.997

14._GU_125_/C RUQ_188

90.7 %
59 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.998

15._GU_195_/V RUQ_1069

90.7 %
59 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.998

16._GU_207_/H RUQ_225

90.7 %
59 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.998

17._GU_265_/P RUQ_890

90.7 %
59 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.998

Key to SNP Markers

Key to SNP Markers

1	TcSNP1527	2	TcSNP1524	3	TcSNP1458	4	TcSNP1404	5	TcSNP1401
6	TcSNP1293	7	TcSNP1275	8	TcSNP1253	9	TcSNP1230	10	TcSNP1205
11	TcSNP1144	12	TcSNP1112	13	TcSNP1062	14	TcSNP1053	15	TcSNP1019
16	TcSNP1010	17	TcSNP999	18	TcSNP998	19	TcSNP945	20	TcSNP899
21	TcSNP872	22	TcSNP836	23	TcSNP835	24	TcSNP823	25	TcSNP800
26	TcSNP739	27	TcSNP731	28	TcSNP723	29	TcSNP702	30	TcSNP660
31	TcSNP645	32	TcSNP644	33	TcSNP642	34	TcSNP640	35	TcSNP602
36	TcSNP591	37	TcSNP589	38	TcSNP577	39	TcSNP546	40	TcSNP529
41	TcSNP522	42	TcSNP519	43	TcSNP421	44	TcSNP363	45	TcSNP329
46	TcSNP305	47	TcSNP290	48	TcSNP230	49	TcSNP194	50	TcSNP189
51	TcSNP176	52	TcSNP144	53	TcSNP143	54	TcSNP131	55	TcSNP52
56	TcSNP49	57	TcSNP33	58	TcSNP19	59	TcSNP13